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Coexpression cluster:C66

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Revision as of 20:40, 8 August 2012 by Autoedit (talk | contribs)
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Full id: C66_cerebellum_middle_occipital_parietal_medial_amygdala_hippocampus



Phase1 CAGE Peaks

Hg19::chr10:3164029..3164033,+p@chr10:3164029..3164033
+
Hg19::chr11:122026905..122026926,-p@chr11:122026905..122026926
-
Hg19::chr11:123381898..123381917,-p@chr11:123381898..123381917
-
Hg19::chr11:132339883..132339902,-p@chr11:132339883..132339902
-
Hg19::chr11:132339903..132339919,-p@chr11:132339903..132339919
-
Hg19::chr11:85338835..85338864,-p11@DLG2
Hg19::chr12:100378201..100378213,-p24@ANKS1B
Hg19::chr12:118406702..118406720,-p10@KSR2
Hg19::chr12:118628275..118628287,-p13@TAOK3
Hg19::chr12:118628288..118628306,-p11@TAOK3
Hg19::chr12:2791955..2791993,+p@chr12:2791955..2791993
+
Hg19::chr12:41242644..41242646,+p@chr12:41242644..41242646
+
Hg19::chr12:50273580..50273591,-p@chr12:50273580..50273591
-
Hg19::chr12:50273710..50273721,-p@chr12:50273710..50273721
-
Hg19::chr12:50274471..50274488,-p4@AK127601
Hg19::chr12:50274699..50274759,-p1@AK127601
Hg19::chr12:50274774..50274785,-p3@AK127601
Hg19::chr12:52034036..52034041,+p@chr12:52034036..52034041
+
Hg19::chr12:67198041..67198052,-p4@GRIP1
Hg19::chr13:108159937..108159943,-p@chr13:108159937..108159943
-
Hg19::chr13:113706899..113706941,+p@chr13:113706899..113706941
+
Hg19::chr13:81591855..81591878,-p@chr13:81591855..81591878
-
Hg19::chr14:101312741..101312751,+p@chr14:101312741..101312751
+
Hg19::chr14:101312806..101312820,+p@chr14:101312806..101312820
+
Hg19::chr14:101313382..101313392,+p@chr14:101313382..101313392
+
Hg19::chr14:101313414..101313415,+p@chr14:101313414..101313415
+
Hg19::chr14:101313710..101313727,+p2@MEG3
Hg19::chr14:101313879..101313891,+p12@MEG3
Hg19::chr14:101313902..101313914,+p3@MEG3
Hg19::chr14:101314042..101314058,+p4@MEG3
Hg19::chr14:101314095..101314102,+p15@MEG3
Hg19::chr14:101314162..101314175,+p6@MEG3
Hg19::chr14:101314181..101314186,+p26@MEG3
Hg19::chr14:101314342..101314360,+p8@MEG3
Hg19::chr14:101314376..101314382,+p38@MEG3
Hg19::chr14:101314648..101314668,+p@chr14:101314648..101314668
+
Hg19::chr14:101314702..101314709,+p@chr14:101314702..101314709
+
Hg19::chr14:101314844..101314851,+p@chr14:101314844..101314851
+
Hg19::chr14:101314865..101314876,+p@chr14:101314865..101314876
+
Hg19::chr14:101314996..101315014,+p@chr14:101314996..101315014
+
Hg19::chr14:101315609..101315620,+p1@ENST00000516892
Hg19::chr14:101315902..101315908,+p@chr14:101315902..101315908
+
Hg19::chr14:101316196..101316209,+p@chr14:101316196..101316209
+
Hg19::chr14:101316298..101316314,+p@chr14:101316298..101316314
+
Hg19::chr14:101316418..101316440,+p@chr14:101316418..101316440
+
Hg19::chr14:23982397..23982437,+p1@ENST00000557568
Hg19::chr14:24020938..24020988,-p1@ZFHX2
Hg19::chr15:25341499..25341510,+p@chr15:25341499..25341510
+
Hg19::chr15:75640154..75640228,+p2@NEIL1
Hg19::chr15:79285762..79285784,-p@chr15:79285762..79285784
-
Hg19::chr15:91806262..91806273,+p@chr15:91806262..91806273
+
Hg19::chr16:2138789..2138809,-p@chr16:2138789..2138809
-
Hg19::chr16:24621660..24621673,+p@chr16:24621660..24621673
+
Hg19::chr16:4323246..4323299,-p5@TFAP4
Hg19::chr16:6107848..6107852,+p@chr16:6107848..6107852
+
Hg19::chr16:80838195..80838228,-p4@CDYL2
Hg19::chr17:38243142..38243171,+p@chr17:38243142..38243171
+
Hg19::chr17:38243177..38243228,+p@chr17:38243177..38243228
+
Hg19::chr17:44046645..44046656,+p@chr17:44046645..44046656
+
Hg19::chr17:44047089..44047100,+p@chr17:44047089..44047100
+
Hg19::chr17:44047222..44047257,+p@chr17:44047222..44047257
+
Hg19::chr17:77465218..77465229,-p@chr17:77465218..77465229
-
Hg19::chr17:79367836..79367872,-p@chr17:79367836..79367872
-
Hg19::chr17:79367873..79367903,-p@chr17:79367873..79367903
-
Hg19::chr18:35145730..35145817,-p1@CELF4
Hg19::chr18:44246403..44246407,-p@chr18:44246403..44246407
-
Hg19::chr19:18701047..18701052,+p5@C19orf60
Hg19::chr19:19644945..19644969,+p3@YJEFN3
Hg19::chr19:23506500..23506542,-p@chr19:23506500..23506542
-
Hg19::chr19:23507223..23507235,-p@chr19:23507223..23507235
-
Hg19::chr19:39522957..39522968,+p@chr19:39522957..39522968
+
Hg19::chr19:46503170..46503229,+p@chr19:46503170..46503229
+
Hg19::chr19:5231762..5231778,-p@chr19:5231762..5231778
-
Hg19::chr1:10147785..10147790,+p@chr1:10147785..10147790
+
Hg19::chr1:172152936..172152941,+p@chr1:172152936..172152941
+
Hg19::chr1:173360572..173360575,-p@chr1:173360572..173360575
-
Hg19::chr1:241463231..241463236,-p@chr1:241463231..241463236
-
Hg19::chr1:241490501..241490517,-p@chr1:241490501..241490517
-
Hg19::chr1:28879369..28879404,-p@chr1:28879369..28879404
-
Hg19::chr1:3541308..3541355,-p1@ENST00000435049
Hg19::chr1:7163290..7163303,+p@chr1:7163290..7163303
+
Hg19::chr20:10200131..10200159,-p1@LOC100131208
Hg19::chr20:10200166..10200187,-p2@LOC100131208
Hg19::chr20:58249368..58249405,+p@chr20:58249368..58249405
+
Hg19::chr21:33959469..33959492,-p@chr21:33959469..33959492
-
Hg19::chr21:35778348..35778374,+p@chr21:35778348..35778374
+
Hg19::chr21:38987268..38987300,-p@chr21:38987268..38987300
-
Hg19::chr21:39134217..39134228,-p@chr21:39134217..39134228
-
Hg19::chr22:22641542..22641574,-p@chr22:22641542..22641574
-
Hg19::chr22:26723168..26723180,+p@chr22:26723168..26723180
+
Hg19::chr22:48977902..48977924,+p@chr22:48977902..48977924
+
Hg19::chr22:48977941..48977963,+p@chr22:48977941..48977963
+
Hg19::chr22:48977977..48978005,+p@chr22:48977977..48978005
+
Hg19::chr22:48978045..48978073,+p@chr22:48978045..48978073
+
Hg19::chr22:48978075..48978110,+p@chr22:48978075..48978110
+
Hg19::chr22:48979505..48979521,+p@chr22:48979505..48979521
+
Hg19::chr22:48979566..48979608,+p@chr22:48979566..48979608
+
Hg19::chr22:48979677..48979692,+p@chr22:48979677..48979692
+
Hg19::chr22:48979768..48979786,+p@chr22:48979768..48979786
+
Hg19::chr22:48979929..48979947,+p@chr22:48979929..48979947
+
Hg19::chr22:48979951..48979970,+p@chr22:48979951..48979970
+
Hg19::chr22:48980210..48980266,+p@chr22:48980210..48980266
+
Hg19::chr22:48980370..48980396,+p@chr22:48980370..48980396
+
Hg19::chr22:48980473..48980481,+p@chr22:48980473..48980481
+
Hg19::chr22:48980509..48980527,+p@chr22:48980509..48980527
+
Hg19::chr22:48980530..48980548,+p@chr22:48980530..48980548
+
Hg19::chr22:48980582..48980607,+p@chr22:48980582..48980607
+
Hg19::chr22:48980608..48980618,+p@chr22:48980608..48980618
+
Hg19::chr22:48980619..48980650,+p@chr22:48980619..48980650
+
Hg19::chr22:48980655..48980678,+p@chr22:48980655..48980678
+
Hg19::chr22:48980816..48980832,+p@chr22:48980816..48980832
+
Hg19::chr22:48980939..48980957,+p@chr22:48980939..48980957
+
Hg19::chr22:48980959..48981016,+p@chr22:48980959..48981016
+
Hg19::chr22:48981029..48981042,+p@chr22:48981029..48981042
+
Hg19::chr22:48981063..48981087,+p@chr22:48981063..48981087
+
Hg19::chr22:48981340..48981370,+p@chr22:48981340..48981370
+
Hg19::chr22:48981458..48981471,+p@chr22:48981458..48981471
+
Hg19::chr2:142888429..142888438,-p6@LRP1B
Hg19::chr2:149790593..149790658,+p@chr2:149790593..149790658
+
Hg19::chr2:149790678..149790689,+p@chr2:149790678..149790689
+
Hg19::chr2:149790696..149790732,+p@chr2:149790696..149790732
+
Hg19::chr2:149790831..149790848,+p@chr2:149790831..149790848
+
Hg19::chr2:149790918..149790964,+p@chr2:149790918..149790964
+
Hg19::chr2:149791025..149791051,+p@chr2:149791025..149791051
+
Hg19::chr2:149880971..149881018,+p@chr2:149880971..149881018
+
Hg19::chr2:162482221..162482270,-p@chr2:162482221..162482270
-
Hg19::chr2:187629214..187629219,+p@chr2:187629214..187629219
+
Hg19::chr2:218108202..218108224,+p@chr2:218108202..218108224
+
Hg19::chr2:2328299..2328363,-p3@MYT1L
Hg19::chr2:241392210..241392222,+p10@GPC1
Hg19::chr2:241392227..241392242,+p@chr2:241392227..241392242
+
Hg19::chr2:80183994..80183997,+p@chr2:80183994..80183997
+
Hg19::chr3:10407580..10407596,-p@chr3:10407580..10407596
-
Hg19::chr3:10407605..10407617,-p@chr3:10407605..10407617
-
Hg19::chr3:10407658..10407665,-p@chr3:10407658..10407665
-
Hg19::chr3:120888586..120888603,+p@chr3:120888586..120888603
+
Hg19::chr3:120899828..120899832,+p@chr3:120899828..120899832
+
Hg19::chr3:35789110..35789121,+p@chr3:35789110..35789121
+
Hg19::chr3:35789184..35789195,+p@chr3:35789184..35789195
+
Hg19::chr3:35789351..35789366,+p@chr3:35789351..35789366
+
Hg19::chr3:85370317..85370318,+p@chr3:85370317..85370318
+
Hg19::chr3:85414363..85414367,+p@chr3:85414363..85414367
+
Hg19::chr4:2060313..2060337,-p@chr4:2060313..2060337
-
Hg19::chr4:2301429..2301444,-p@chr4:2301429..2301444
-
Hg19::chr4:24349594..24349636,-p@chr4:24349594..24349636
-
Hg19::chr4:24474485..24474537,-p@chr4:24474485..24474537
-
Hg19::chr4:6470800..6470805,-p@chr4:6470800..6470805
-
Hg19::chr5:159479553..159479554,-p@chr5:159479553..159479554
-
Hg19::chr5:17807394..17807408,+p1@LOC646241
Hg19::chr6:101930315..101930345,+p@chr6:101930315..101930345
+
Hg19::chr6:123318500..123318535,+p@chr6:123318500..123318535
+
Hg19::chr6:123387461..123387475,+p@chr6:123387461..123387475
+
Hg19::chr6:136847074..136847092,-p11@MAP7
Hg19::chr6:69353352..69353355,+p@chr6:69353352..69353355
+
Hg19::chr6:84363120..84363166,-p@chr6:84363120..84363166
-
Hg19::chr7:10763409..10763413,-p@chr7:10763409..10763413
-
Hg19::chr7:130150437..130150449,+p@chr7:130150437..130150449
+
Hg19::chr7:141036329..141036354,+p@chr7:141036329..141036354
+
Hg19::chr7:141036376..141036394,+p@chr7:141036376..141036394
+
Hg19::chr7:141036457..141036556,+p@chr7:141036457..141036556
+
Hg19::chr7:157747321..157747358,-p@chr7:157747321..157747358
-
Hg19::chr7:43237574..43237613,+p@chr7:43237574..43237613
+
Hg19::chr7:78632377..78632407,-p@chr7:78632377..78632407
-
Hg19::chr7:82545719..82545750,-p5@PCLO
Hg19::chr7:82582874..82582904,-p@chr7:82582874..82582904
-
Hg19::chr7:82583410..82583424,-p@chr7:82583410..82583424
-
Hg19::chr7:82595550..82595561,-p@chr7:82595550..82595561
-
Hg19::chr7:82595698..82595715,-p@chr7:82595698..82595715
-
Hg19::chr7:82595722..82595746,-p@chr7:82595722..82595746
-
Hg19::chr7:82595772..82595786,-p@chr7:82595772..82595786
-
Hg19::chr8:10891093..10891117,-p@chr8:10891093..10891117
-
Hg19::chr8:85135273..85135281,+p@chr8:85135273..85135281
+
Hg19::chr8:9757705..9757714,-p@chr8:9757705..9757714
-
Hg19::chr8:9765784..9765807,-p@chr8:9765784..9765807
-
Hg19::chr9:101200582..101200586,-p@chr9:101200582..101200586
-
Hg19::chr9:101254627..101254632,-p@chr9:101254627..101254632
-
Hg19::chr9:124569721..124569737,-p@chr9:124569721..124569737
-
Hg19::chr9:124658439..124658469,-p@chr9:124658439..124658469
-
Hg19::chr9:68418347..68418357,+p@chr9:68418347..68418357
+
Hg19::chr9:68418534..68418556,+p@chr9:68418534..68418556
+
Hg19::chr9:68418560..68418591,+p@chr9:68418560..68418591
+
Hg19::chr9:68418627..68418643,+p@chr9:68418627..68418643
+
Hg19::chr9:68418644..68418655,+p@chr9:68418644..68418655
+
Hg19::chr9:68418727..68418769,+p@chr9:68418727..68418769
+
Hg19::chr9:68418845..68418872,+p@chr9:68418845..68418872
+
Hg19::chr9:68418878..68418901,+p@chr9:68418878..68418901
+
Hg19::chr9:68419103..68419127,+p@chr9:68419103..68419127
+
Hg19::chr9:68419129..68419151,+p@chr9:68419129..68419151
+
Hg19::chr9:68419215..68419301,+p@chr9:68419215..68419301
+
Hg19::chr9:68419314..68419335,+p@chr9:68419314..68419335
+
Hg19::chr9:99540425..99540444,+p@chr9:99540425..99540444
+
Hg19::chrX:101381785..101381798,+p1@AB464729
Hg19::chrX:101967412..101967415,+p5@ARMCX5-GPRASP2
p7@GPRASP2
Hg19::chrX:139794589..139794595,+p@chrX:139794589..139794595
+
Hg19::chrX:139795559..139795571,+p@chrX:139795559..139795571
+
Hg19::chrX:139795686..139795699,+p@chrX:139795686..139795699
+
Hg19::chrX:139795702..139795707,+p@chrX:139795702..139795707
+
Hg19::chrX:139795718..139795719,+p@chrX:139795718..139795719
+
Hg19::chrX:139795738..139795748,+p@chrX:139795738..139795748
+
Hg19::chrX:139795927..139795938,+p@chrX:139795927..139795938
+
Hg19::chrX:139795962..139795974,+p@chrX:139795962..139795974
+
Hg19::chrX:139795983..139795993,+p@chrX:139795983..139795993
+
Hg19::chrX:139796004..139796015,+p@chrX:139796004..139796015
+
Hg19::chrX:139796146..139796155,+p@chrX:139796146..139796155
+
Hg19::chrX:139797894..139797918,+p@chrX:139797894..139797918
+
Hg19::chrX:139798387..139798398,+p@chrX:139798387..139798398
+
Hg19::chrX:139798407..139798424,+p@chrX:139798407..139798424
+
Hg19::chrX:139798558..139798571,+p@chrX:139798558..139798571
+
Hg19::chrX:139798755..139798768,+p@chrX:139798755..139798768
+
Hg19::chrX:139799498..139799521,+p@chrX:139799498..139799521
+
Hg19::chrX:139799550..139799565,+p@chrX:139799550..139799565
+
Hg19::chrX:139800864..139800913,+p@chrX:139800864..139800913
+
Hg19::chrX:139802859..139802874,+p@chrX:139802859..139802874
+
Hg19::chrX:139803017..139803037,+p@chrX:139803017..139803037
+
Hg19::chrX:139803820..139803865,+p@chrX:139803820..139803865
+
Hg19::chrX:139804034..139804058,+p@chrX:139804034..139804058
+
Hg19::chrX:139804286..139804294,+p@chrX:139804286..139804294
+
Hg19::chrX:139804312..139804329,+p@chrX:139804312..139804329
+
Hg19::chrX:139805122..139805154,+p@chrX:139805122..139805154
+
Hg19::chrX:139805225..139805235,+p@chrX:139805225..139805235
+
Hg19::chrX:139805237..139805249,+p@chrX:139805237..139805249
+
Hg19::chrX:139805250..139805272,+p@chrX:139805250..139805272
+
Hg19::chrX:139805285..139805304,+p@chrX:139805285..139805304
+
Hg19::chrX:139805315..139805405,+p@chrX:139805315..139805405
+
Hg19::chrX:139805418..139805432,+p@chrX:139805418..139805432
+
Hg19::chrX:139805447..139805459,+p@chrX:139805447..139805459
+
Hg19::chrX:139805460..139805472,+p@chrX:139805460..139805472
+
Hg19::chrX:139805481..139805518,+p@chrX:139805481..139805518
+
Hg19::chrX:139805588..139805598,+p@chrX:139805588..139805598
+
Hg19::chrX:139805623..139805632,+p@chrX:139805623..139805632
+
Hg19::chrX:139805680..139805692,+p@chrX:139805680..139805692
+
Hg19::chrX:139805765..139805779,+p@chrX:139805765..139805779
+
Hg19::chrX:139805877..139805899,+p@chrX:139805877..139805899
+
Hg19::chrX:139805918..139805934,+p@chrX:139805918..139805934
+
Hg19::chrX:139805966..139805989,+p@chrX:139805966..139805989
+
Hg19::chrX:139806014..139806081,+p@chrX:139806014..139806081
+
Hg19::chrX:139806101..139806140,+p@chrX:139806101..139806140
+
Hg19::chrX:139806144..139806160,+p@chrX:139806144..139806160
+
Hg19::chrX:139806183..139806199,+p@chrX:139806183..139806199
+
Hg19::chrX:139806203..139806220,+p@chrX:139806203..139806220
+
Hg19::chrX:139806224..139806238,+p@chrX:139806224..139806238
+
Hg19::chrX:139806244..139806275,+p@chrX:139806244..139806275
+
Hg19::chrX:139806318..139806328,+p@chrX:139806318..139806328
+
Hg19::chrX:139806342..139806361,+p@chrX:139806342..139806361
+
Hg19::chrX:139806362..139806372,+p@chrX:139806362..139806372
+
Hg19::chrX:139806472..139806481,+p@chrX:139806472..139806481
+
Hg19::chrX:139806611..139806614,+p@chrX:139806611..139806614
+
Hg19::chrX:139806622..139806636,+p@chrX:139806622..139806636
+
Hg19::chrX:139806732..139806735,+p@chrX:139806732..139806735
+
Hg19::chrX:139806818..139806829,+p@chrX:139806818..139806829
+
Hg19::chrX:139806880..139806889,+p@chrX:139806880..139806889
+
Hg19::chrX:139806923..139806934,+p@chrX:139806923..139806934
+
Hg19::chrX:139806967..139806978,+p@chrX:139806967..139806978
+
Hg19::chrX:139807109..139807115,+p@chrX:139807109..139807115
+
Hg19::chrX:139807128..139807139,+p@chrX:139807128..139807139
+
Hg19::chrX:139807231..139807236,+p@chrX:139807231..139807236
+
Hg19::chrX:139807886..139807891,+p@chrX:139807886..139807891
+
Hg19::chrX:139807915..139807925,+p@chrX:139807915..139807925
+
Hg19::chrX:139807996..139808005,+p@chrX:139807996..139808005
+
Hg19::chrX:139808209..139808220,+p@chrX:139808209..139808220
+
Hg19::chrX:139808316..139808327,+p@chrX:139808316..139808327
+
Hg19::chrX:139808427..139808452,+p@chrX:139808427..139808452
+
Hg19::chrX:139808503..139808541,+p@chrX:139808503..139808541
+
Hg19::chrX:139808820..139808832,+p@chrX:139808820..139808832
+
Hg19::chrX:139810734..139810747,+p@chrX:139810734..139810747
+
Hg19::chrX:139810762..139810784,+p@chrX:139810762..139810784
+
Hg19::chrX:139810962..139811021,+p@chrX:139810962..139811021
+
Hg19::chrX:139811024..139811091,+p@chrX:139811024..139811091
+
Hg19::chrX:139811122..139811150,+p@chrX:139811122..139811150
+
Hg19::chrX:1479347..1479364,-p@chrX:1479347..1479364
-
Hg19::chrX:1480171..1480189,-p@chrX:1480171..1480189
-
Hg19::chrX:1481299..1481310,-p@chrX:1481299..1481310
-
Hg19::chrX:1481372..1481387,-p@chrX:1481372..1481387
-
Hg19::chrX:1481546..1481563,-p@chrX:1481546..1481563
-
Hg19::chrX:1481635..1481645,-p@chrX:1481635..1481645
-
Hg19::chrX:21666936..21666940,+p@chrX:21666936..21666940
+
Hg19::chrX:73069837..73069854,-p@chrX:73069837..73069854
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br>disease_data<br>

Uber Anatomy
Ontology termp-valuen
regional part of nervous system1.14e-3594
nervous system1.14e-3594
central nervous system5.22e-3482
adult organism9.09e-34115
neural tube4.92e-3157
neural rod4.92e-3157
future spinal cord4.92e-3157
neural keel4.92e-3157
brain6.40e-2869
future brain6.40e-2869
regional part of forebrain1.92e-2641
forebrain1.92e-2641
future forebrain1.92e-2641
neurectoderm4.23e-2690
anterior neural tube4.25e-2642
regional part of brain6.70e-2659
ectoderm6.32e-25173
presumptive ectoderm6.32e-25173
neural plate4.45e-2486
presumptive neural plate4.45e-2486
ectoderm-derived structure3.94e-23169
gray matter2.68e-2234
brain grey matter2.68e-2234
telencephalon3.55e-2234
regional part of telencephalon1.39e-2133
cerebral hemisphere5.19e-2132
anterior region of body1.68e-18129
craniocervical region1.68e-18129
head2.83e-18123
pre-chordal neural plate3.95e-1861
cerebral cortex1.11e-1625
pallium1.11e-1625
regional part of cerebral cortex1.08e-1522
neocortex2.29e-1420
basal ganglion3.87e-079
nuclear complex of neuraxis3.87e-079
aggregate regional part of brain3.87e-079
collection of basal ganglia3.87e-079
cerebral subcortex3.87e-079
nucleus of brain4.54e-079
neural nucleus4.54e-079
Disease
Ontology termp-valuen
germ cell and embryonal cancer1.46e-0722
germ cell cancer1.46e-0722


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

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ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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