FFCP PHASE1:Hg19::chr14:22458596..22458628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_uc001wco.2,uc001wcq.2_5end | |association_with_transcript=-12bp_to_uc001wco.2,uc001wcq.2_5end | ||
|cluster_id=chr14:22458596..22458628,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_uc001wco.2_5end,CAGE_peak_1_at_uc001wcq.2_5end | |description=CAGE_peak_1_at_uc001wco.2_5end,CAGE_peak_1_at_uc001wcq.2_5end | ||
|id=chr14:22458596..22458628,+ | |id=chr14:22458596..22458628,+ | ||
|ontology_enrichment_celltype=CL:0000791!8.91e-26!18;CL:0000789!8.91e-26!18;CL:0002420!8.91e-26!18;CL:0002419!8.91e-26!18;CL:0000790!8.91e-26!18;CL:0000084!3.21e-21!25;CL:0000827!3.21e-21!25;CL:0000625!2.04e-18!11;CL:0000738!1.55e-15!140;CL:0002087!7.51e-15!119;CL:0000838!2.05e-11!52;CL:0002031!3.67e-11!124;CL:0000542!4.54e-11!53;CL:0000051!4.54e-11!53;CL:0000624!7.68e-11!6;CL:0000037!4.37e-10!172;CL:0000566!4.37e-10!172;CL:0002032!4.89e-09!165;CL:0000837!4.89e-09!165;CL:0000988!7.91e-09!182 | |ontology_enrichment_celltype=CL:0000791!8.91e-26!18;CL:0000789!8.91e-26!18;CL:0002420!8.91e-26!18;CL:0002419!8.91e-26!18;CL:0000790!8.91e-26!18;CL:0000084!3.21e-21!25;CL:0000827!3.21e-21!25;CL:0000625!2.04e-18!11;CL:0000738!1.55e-15!140;CL:0002087!7.51e-15!119;CL:0000838!2.05e-11!52;CL:0002031!3.67e-11!124;CL:0000542!4.54e-11!53;CL:0000051!4.54e-11!53;CL:0000624!7.68e-11!6;CL:0000037!4.37e-10!172;CL:0000566!4.37e-10!172;CL:0002032!4.89e-09!165;CL:0000837!4.89e-09!165;CL:0000988!7.91e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.18e-44;18!CL:0000789;1.18e-44;18!CL:0002419;1.18e-44;18!CL:0000084;1.31e-34;25!CL:0000625;2.72e-31;11!CL:0000624;7.86e-18;6!CL:0000542;2.99e-10;53!CL:0000898;4.00e-10;3!CL:0000623;5.08e-09;3!CL:0000226;5.45e-09;3!CL:0000842;5.45e-09;3!CL:0000815;2.62e-07;2!CL:0000792;2.62e-07;2!CL:0002677;2.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.30e-44,18;CL:0000789,1.30e-44,18;CL:0002420,1.30e-44,18;CL:0002419,1.30e-44,18;CL:0000790,1.30e-44,18;CL:0000084,1.42e-34,25;CL:0000827,1.42e-34,25;CL:0000625,3.25e-31,11;CL:0000838,1.03e-19,52;CL:0000542,3.09e-19,53;CL:0000051,3.09e-19,53;CL:0000624,7.31e-18,6;CL:0002087,3.83e-11,115;CL:0000738,4.90e-11,136;CL:0000898,3.88e-10,3;CL:0000623,4.67e-09,3;CL:0000825,4.67e-09,3;CL:0000226,5.23e-09,3;CL:0000842,5.23e-09,3;CL:0002031,1.03e-07,120;CL:0000037,1.31e-07,168;CL:0000815,2.46e-07,2;CL:0000792,2.46e-07,2;CL:0002677,2.46e-07,2;CL:0000988,6.94e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.18e-44;18!CL:0000051;2.99e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-14!115;UBERON:0000178!3.59e-14!15;UBERON:0000179!3.59e-14!15;UBERON:0000463!3.59e-14!15;UBERON:0002390!5.23e-10!102;UBERON:0003061!5.23e-10!102;UBERON:0002193!8.97e-10!112 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-14!115;UBERON:0000178!3.59e-14!15;UBERON:0000179!3.59e-14!15;UBERON:0000463!3.59e-14!15;UBERON:0002390!5.23e-10!102;UBERON:0003061!5.23e-10!102;UBERON:0002193!8.97e-10!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-24;15!UBERON:0000179;1.38e-24;15!UBERON:0000463;1.38e-24;15!UBERON:0002390;6.00e-15;32!UBERON:0002193;1.80e-10;42!UBERON:0002370;6.17e-07;2!UBERON:0005058;6.17e-07;2!UBERON:0009113;6.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.18e-24,15;UBERON:0000179,1.18e-24,15;UBERON:0000463,1.18e-24,15;UBERON:0002370,2.23e-07,4;UBERON:0005058,2.23e-07,4;UBERON:0009113,2.23e-07,4;UBERON:0003295,2.23e-07,4;UBERON:0005562,2.23e-07,4;UBERON:0004177,8.43e-07,7;UBERON:0005057,8.43e-07,7 | |||
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| ||
|short_description=p1@uc001wco.2,p1@uc001wcq.2 | |short_description=p1@uc001wco.2,p1@uc001wcq.2 | ||
}} | }} |
Latest revision as of 19:07, 24 July 2015
Short description: | p1@uc001wco.2, p1@uc001wcq.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wco.2_5end, CAGE_peak_1_at_uc001wcq.2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -12bp_to_uc001wco.2, uc001wcq.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.30e-44 | 18 |
alpha-beta T cell | 1.30e-44 | 18 |
immature T cell | 1.30e-44 | 18 |
mature T cell | 1.30e-44 | 18 |
immature alpha-beta T cell | 1.30e-44 | 18 |
T cell | 1.42e-34 | 25 |
pro-T cell | 1.42e-34 | 25 |
CD8-positive, alpha-beta T cell | 3.25e-31 | 11 |
lymphoid lineage restricted progenitor cell | 1.03e-19 | 52 |
lymphocyte | 3.09e-19 | 53 |
common lymphoid progenitor | 3.09e-19 | 53 |
CD4-positive, alpha-beta T cell | 7.31e-18 | 6 |
nongranular leukocyte | 3.83e-11 | 115 |
leukocyte | 4.90e-11 | 136 |
naive T cell | 3.88e-10 | 3 |
natural killer cell | 4.67e-09 | 3 |
pro-NK cell | 4.67e-09 | 3 |
single nucleate cell | 5.23e-09 | 3 |
mononuclear cell | 5.23e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.03e-07 | 120 |
hematopoietic stem cell | 1.31e-07 | 168 |
regulatory T cell | 2.46e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.46e-07 | 2 |
naive regulatory T cell | 2.46e-07 | 2 |
hematopoietic cell | 6.94e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.18e-24 | 15 |
haemolymphatic fluid | 1.18e-24 | 15 |
organism substance | 1.18e-24 | 15 |
thymus | 2.23e-07 | 4 |
hemolymphoid system gland | 2.23e-07 | 4 |
thymic region | 2.23e-07 | 4 |
pharyngeal gland | 2.23e-07 | 4 |
thymus primordium | 2.23e-07 | 4 |
hemopoietic organ | 8.43e-07 | 7 |
immune organ | 8.43e-07 | 7 |