FFCP PHASE1:Hg19::chr14:22458631..22458670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001wco.2,uc001wcq.2_5end | |association_with_transcript=0bp_to_uc001wco.2,uc001wcq.2_5end | ||
|cluster_id=chr14:22458631..22458670,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_uc001wco.2_5end,CAGE_peak_2_at_uc001wcq.2_5end | |description=CAGE_peak_2_at_uc001wco.2_5end,CAGE_peak_2_at_uc001wcq.2_5end | ||
|id=chr14:22458631..22458670,+ | |id=chr14:22458631..22458670,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.63e-32!18;CL:0000789!6.63e-32!18;CL:0002420!6.63e-32!18;CL:0002419!6.63e-32!18;CL:0000790!6.63e-32!18;CL:0000084!7.82e-27!25;CL:0000827!7.82e-27!25;CL:0000625!1.65e-22!11;CL:0000738!2.69e-15!140;CL:0002087!1.03e-14!119;CL:0000838!4.26e-14!52;CL:0000542!1.04e-13!53;CL:0000051!1.04e-13!53;CL:0000624!3.38e-13!6;CL:0002031!6.09e-11!124;CL:0000037!2.33e-10!172;CL:0000566!2.33e-10!172;CL:0000988!3.33e-09!182;CL:0002032!4.71e-09!165;CL:0000837!4.71e-09!165;CL:0000898!8.57e-08!3;CL:0000623!6.48e-07!3;CL:0000825!6.48e-07!3;CL:0000842!8.25e-07!3 | |ontology_enrichment_celltype=CL:0000791!6.63e-32!18;CL:0000789!6.63e-32!18;CL:0002420!6.63e-32!18;CL:0002419!6.63e-32!18;CL:0000790!6.63e-32!18;CL:0000084!7.82e-27!25;CL:0000827!7.82e-27!25;CL:0000625!1.65e-22!11;CL:0000738!2.69e-15!140;CL:0002087!1.03e-14!119;CL:0000838!4.26e-14!52;CL:0000542!1.04e-13!53;CL:0000051!1.04e-13!53;CL:0000624!3.38e-13!6;CL:0002031!6.09e-11!124;CL:0000037!2.33e-10!172;CL:0000566!2.33e-10!172;CL:0000988!3.33e-09!182;CL:0002032!4.71e-09!165;CL:0000837!4.71e-09!165;CL:0000898!8.57e-08!3;CL:0000623!6.48e-07!3;CL:0000825!6.48e-07!3;CL:0000842!8.25e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.88e-46;18!CL:0000789;6.88e-46;18!CL:0002419;6.88e-46;18!CL:0000084;4.83e-36;25!CL:0000625;5.80e-30;11!CL:0000624;1.56e-20;6!CL:0000898;9.94e-12;3!CL:0000542;1.38e-10;53!CL:0000623;2.48e-10;3!CL:0000226;3.81e-10;3!CL:0000842;3.81e-10;3!CL:0000815;2.40e-08;2!CL:0000792;2.40e-08;2!CL:0002677;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.48e-46,18;CL:0000789,6.48e-46,18;CL:0002420,6.48e-46,18;CL:0002419,6.48e-46,18;CL:0000790,6.48e-46,18;CL:0000084,4.56e-36,25;CL:0000827,4.56e-36,25;CL:0000625,5.71e-30,11;CL:0000838,2.51e-21,52;CL:0000542,7.91e-21,53;CL:0000051,7.91e-21,53;CL:0000624,1.48e-20,6;CL:0002087,8.43e-12,115;CL:0000898,9.76e-12,3;CL:0000623,2.61e-10,3;CL:0000825,2.61e-10,3;CL:0000226,3.87e-10,3;CL:0000842,3.87e-10,3;CL:0000738,5.20e-10,136;CL:0000815,2.28e-08,2;CL:0000792,2.28e-08,2;CL:0002677,2.28e-08,2;CL:0002031,4.14e-08,120;CL:0000037,5.28e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;6.88e-46;18!CL:0000051;1.38e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.06e-15!15;UBERON:0000179!9.06e-15!15;UBERON:0000463!9.06e-15!15;UBERON:0007023!4.37e-09!115;UBERON:0002193!4.47e-09!112;UBERON:0002390!5.64e-09!102;UBERON:0003061!5.64e-09!102;UBERON:0004177!1.64e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.37e-24;15!UBERON:0000179;5.37e-24;15!UBERON:0000463;5.37e-24;15!UBERON:0002390;1.55e-15;32!UBERON:0002193;2.77e-12;42!UBERON:0002370;4.38e-08;2!UBERON:0005058;4.38e-08;2!UBERON:0009113;4.38e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.06e-24,15;UBERON:0000179,5.06e-24,15;UBERON:0000463,5.06e-24,15;UBERON:0002370,1.14e-08,4;UBERON:0005058,1.14e-08,4;UBERON:0009113,1.14e-08,4;UBERON:0003295,1.14e-08,4;UBERON:0005562,1.14e-08,4;UBERON:0004177,4.64e-08,7;UBERON:0005057,4.64e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,0,0,0,1.66198622559563,0.401088894940283,0.217010870715852,0,1.6194683300949,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31116379307349,3.93010762749165,6.5792479679843,19.226446969928,16.6220355983131,17.9910166179199,11.6896037044747,25.9586364542454,14.7302953737419,15.5073726208535,22.4767206924963,12.2967666936648,10.0145697621106,19.8969864570448,14.9229009604358,30.4293240021805,16.3115219478266,14.4472047168445,17.7710390468461,16.6564733765422,16.0952607312807,12.7142154828573,25.3019692019503,14.3354436445844,13.0216690771284,7.60361635558699,11.895434407144,11.1348351704344,13.742379920758,13.2595261144649,11.4957919568947,15.9269327147539,0.802320587350522,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09310736726938,3.01878604803324,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,2.5885704098234,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07447609232169,3.82318603571188,2.84823593587081,7.86164859010704,5.34770955012053,3.24236655596359,5.94034580961926,5.55187623405989,0,0,0,0,0,4.12622691420802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.640724475406168,0,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0,0,0,1.2217909337381,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,16.0826385491655,6.89029328684023,0,0,0,0.217716747896961,0,3.09819443867103,0.358611026963382,0,0,0,0,0,0,0,0,0,4.02547587182052,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,0,0,0,1.66198622559563,0.401088894940283,0.217010870715852,0,1.6194683300949,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31116379307349,3.93010762749165,6.5792479679843,19.226446969928,16.6220355983131,17.9910166179199,11.6896037044747,25.9586364542454,14.7302953737419,15.5073726208535,22.4767206924963,12.2967666936648,10.0145697621106,19.8969864570448,14.9229009604358,30.4293240021805,16.3115219478266,14.4472047168445,17.7710390468461,16.6564733765422,16.0952607312807,12.7142154828573,25.3019692019503,14.3354436445844,13.0216690771284,7.60361635558699,11.895434407144,11.1348351704344,13.742379920758,13.2595261144649,11.4957919568947,15.9269327147539,0.802320587350522,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09310736726938,3.01878604803324,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,2.5885704098234,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07447609232169,3.82318603571188,2.84823593587081,7.86164859010704,5.34770955012053,3.24236655596359,5.94034580961926,5.55187623405989,0,0,0,0,0,4.12622691420802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.640724475406168,0,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0,0,0,1.2217909337381,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,16.0826385491655,6.89029328684023,0,0,0,0.217716747896961,0,3.09819443867103,0.358611026963382,0,0,0,0,0,0,0,0,0,4.02547587182052,0 | ||
|short_description=p2@uc001wco.2,p2@uc001wcq.2 | |short_description=p2@uc001wco.2,p2@uc001wcq.2 | ||
}} | }} |
Latest revision as of 19:08, 24 July 2015
Short description: | p2@uc001wco.2, p2@uc001wcq.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001wco.2_5end, CAGE_peak_2_at_uc001wcq.2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc001wco.2, uc001wcq.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.48e-46 | 18 |
alpha-beta T cell | 6.48e-46 | 18 |
immature T cell | 6.48e-46 | 18 |
mature T cell | 6.48e-46 | 18 |
immature alpha-beta T cell | 6.48e-46 | 18 |
T cell | 4.56e-36 | 25 |
pro-T cell | 4.56e-36 | 25 |
CD8-positive, alpha-beta T cell | 5.71e-30 | 11 |
lymphoid lineage restricted progenitor cell | 2.51e-21 | 52 |
lymphocyte | 7.91e-21 | 53 |
common lymphoid progenitor | 7.91e-21 | 53 |
CD4-positive, alpha-beta T cell | 1.48e-20 | 6 |
nongranular leukocyte | 8.43e-12 | 115 |
naive T cell | 9.76e-12 | 3 |
natural killer cell | 2.61e-10 | 3 |
pro-NK cell | 2.61e-10 | 3 |
single nucleate cell | 3.87e-10 | 3 |
mononuclear cell | 3.87e-10 | 3 |
leukocyte | 5.20e-10 | 136 |
regulatory T cell | 2.28e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.28e-08 | 2 |
naive regulatory T cell | 2.28e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 4.14e-08 | 120 |
hematopoietic stem cell | 5.28e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 5.06e-24 | 15 |
haemolymphatic fluid | 5.06e-24 | 15 |
organism substance | 5.06e-24 | 15 |
thymus | 1.14e-08 | 4 |
hemolymphoid system gland | 1.14e-08 | 4 |
thymic region | 1.14e-08 | 4 |
pharyngeal gland | 1.14e-08 | 4 |
thymus primordium | 1.14e-08 | 4 |
hemopoietic organ | 4.64e-08 | 7 |
immune organ | 4.64e-08 | 7 |