FFCP PHASE1:Hg19::chr2:47074720..47074747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:47074720..47074747,+ | |||
|description=CAGE_peak_at_chr2:47074720..47074747,+ | |||
|id=chr2:47074720..47074747,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.39e-46!180;CL:0000057!1.30e-31!75;CL:0000680!3.23e-20!57;CL:0000056!3.23e-20!57;CL:0000355!3.23e-20!57;CL:0000187!1.62e-18!54;CL:0000192!6.27e-16!42;CL:0000514!6.27e-16!42;CL:0000144!1.08e-15!625;CL:0000183!1.30e-15!59;CL:0002620!3.42e-15!23;CL:0000393!4.28e-15!60;CL:0000211!4.28e-15!60;CL:0002371!7.45e-15!591;CL:0000048!9.79e-15!430;CL:0000723!3.50e-14!436;CL:0000034!4.87e-13!444;CL:0000548!4.82e-12!679;CL:0000004!4.82e-12!679;CL:0000255!4.82e-12!679;CL:0000012!1.12e-11!682;CL:0000222!1.54e-11!119;CL:0000359!9.66e-11!32;CL:0000220!4.20e-09!246;CL:0002321!8.11e-09!248;CL:0000003!1.41e-07!722;CL:0002570!2.24e-07!8;CL:0002334!3.14e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.81e-12;23!CL:0000057;2.07e-10;73!CL:0002570;3.13e-10;8!CL:0002556;4.70e-10;6!CL:0002540;1.59e-09;6!CL:0002320;8.08e-07;188!CL:0000134;8.14e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.60e-25,76;CL:0002620,1.72e-12,23;CL:0000048,4.59e-11,427;CL:0000723,1.13e-10,433;CL:0002570,1.51e-10,8;CL:0000034,3.57e-10,441;CL:0002556,3.79e-10,6;CL:0002540,3.12e-09,6;CL:0002320,1.15e-08,361;CL:0000134,2.01e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.83e-25!83;UBERON:0002329!2.83e-25!83;UBERON:0003077!2.83e-25!83;UBERON:0003059!2.83e-25!83;UBERON:0007282!2.83e-25!83;UBERON:0009618!2.83e-25!83;UBERON:0007285!2.83e-25!83;UBERON:0004290!2.71e-21!70;UBERON:0001134!9.14e-18!61;UBERON:0002036!9.14e-18!61;UBERON:0003082!9.14e-18!61;UBERON:0000486!4.18e-17!82;UBERON:0005256!6.11e-17!143;UBERON:0002385!1.14e-16!63;UBERON:0001015!1.14e-16!63;UBERON:0000383!1.14e-16!63;UBERON:0000475!1.13e-12!365;UBERON:0003102!3.92e-11!95;UBERON:0000481!1.13e-10!347;UBERON:0000490!2.72e-10!138;UBERON:0002199!1.47e-09!45;UBERON:0002416!1.47e-09!45;UBERON:0002100!2.04e-09!216;UBERON:0004573!5.59e-09!33;UBERON:0004571!5.59e-09!33;UBERON:0002097!7.42e-09!40;UBERON:0003104!7.72e-09!238;UBERON:0009142!7.72e-09!238;UBERON:0001637!2.01e-08!42;UBERON:0003509!2.01e-08!42;UBERON:0004572!2.01e-08!42;UBERON:0002049!1.16e-07!79;UBERON:0007798!1.16e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;1.86e-10;16!UBERON:0001758;4.70e-10;6!UBERON:0003672;4.70e-10;6!UBERON:0003129;1.49e-08;7!UBERON:0001434;1.60e-08;36!UBERON:0003102;1.86e-07;50!UBERON:0002097;2.16e-07;41!UBERON:0011137;2.75e-07;11!UBERON:0010323;2.75e-07;11!UBERON:0002204;3.14e-07;70!UBERON:0002384;4.61e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.60e-12,99;UBERON:0002199,8.37e-11,46;UBERON:0002416,8.37e-11,46;UBERON:0000075,1.25e-10,16;UBERON:0001758,3.79e-10,6;UBERON:0003672,3.79e-10,6;UBERON:0011137,6.98e-10,14;UBERON:0002097,1.86e-09,41;UBERON:0003129,1.25e-08,7;UBERON:0002384,1.25e-08,371;UBERON:0007524,1.04e-07,73;UBERON:0010323,2.49e-07,11;UBERON:0002329,3.84e-07,71;UBERON:0003059,3.84e-07,71;UBERON:0007282,3.84e-07,71;UBERON:0004290,3.84e-07,71;UBERON:0009618,3.84e-07,71;UBERON:0003077,5.55e-07,72;UBERON:0007285,5.55e-07,72 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,1.48519623552056,0.994192127183747,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,1.35433163884467,0.816002764977012,0.940364164434263,0,0.410623275218653,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.722878304769133,0.50133791063589,0.579386075843295,1.5905718941022,0,0.378139268656271,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,1.05927344650575,0.286836620748814,2.4826786753885,1.12135520028461,0,0,0.622422070799533,0.134710672069688,0.980771418680752,0.756787138224657,0,0.468642863667593,0.624320153660641,1.71141546463335,1.79338416662161,1.76151747965647,0.971237666208789,1.82586048712923,2.85815839756851,1.47401180774122,1.34323515528495,0,0.247266929278557,1.82032272387605,0,3.19838616512726,0.750711119231785,3.04770527032601,1.75591048352335,1.5324389789951,1.35214253015937,0.113432183160021,0.358779271377724,0.85422955527427,0.847727604638247,1.80054657650641,2.98852334791473,0.772921620136887,1.30281799432113,0.506328996723799,2.24105111870757,0.504867548488229,3.12969655383818,1.13152239773168,0.710019185033229,1.41052937518696,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,3.60939740834793,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,2.057870056657,0,0,0.982827216677626,1.18157981336281,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,3.57656445851882,1.690605505112,0.531876233169741,0,1.02882949704857,0,1.5985330740966,0.714889968290738,0.542621605391443,0.823240336780769,1.62868092146868,1.42156779497018,0,0.602878754119172,0,0.599837947092342,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.723906533337896,1.43833425785268,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.8403723757871,2.00068208423871,0.813795071099207,0.623912584592421,0.892144943985809,0.473107245101804,0.819989904948992,0,0,0,0,0.368738337083406,1.47702144595741,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,1.12264037773229,0.256278298511402,0.511707249066704,0.160853921143607,0,3.08419387605311,1.77561725313127,2.79232330446951,0.519254429183621,1.85936605535935,0,0,0,1.60740227430449,0.728364672026868,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,1.96808787419823,2.27764876265012,0,0.0915694648183434,0,1.14853107599234,0.650060246036521,1.6068392984416,0,0.924291702687866,0.460511024178389,0.551346289938122,0.751941714077915,0.580066775656914,0.681813019328807,0.356128142586949,0,0,0,0,0,1.25924938732256,2.0911118104818,0.924100740528266,1.06461206063404,3.47973196830029,0.55597265731176,0.143124886741991,0.372158369359667,0,0.953150969619124,0.511795582622668,0,1.59101623962968,0.78494864019923,0.359744915166629,0.54907405947211,0.589062011728432,1.61745985258653,1.58510321173008,0.842516912477962,0.48763373908959,0.487426979262569,0,0.818999468447914,0.707027159768564,3.39024349860728,1.65409603063837,0,0.438450885253763,1.73632660280006,0.655894752046633,0,0.6196469961995,0.563391205064483,0.430234056612155,0,0,3.19284957663538,1.26664581178598,0.329294892959902,1.89736586882858,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.164230914106418,0.193978032976839,0,0,0.137041924646751,0,0,0,0.480952921509202,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,2.5926644736038,0,0,0,1.87426823963964,0.226624183040251,1.17241786942466,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0,1.34329322598187,0.233713309847224,2.77402930751307,2.08343305802598,1.0062716070103,1.77962244319307,0.686520205190771,1.05861646634267,1.08806040407946,1.33069634990671,0.796483835818512,0,0.621051827505038,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| |||
|short_description=p@chr2:47074720..47074747,+ | |||
}} |
Latest revision as of 10:31, 29 July 2015
Short description: | p@chr2:47074720..47074747, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47074720..47074747, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.60e-25 | 76 |
skin fibroblast | 1.72e-12 | 23 |
multi fate stem cell | 4.59e-11 | 427 |
somatic stem cell | 1.13e-10 | 433 |
mesenchymal stem cell of adipose | 1.51e-10 | 8 |
stem cell | 3.57e-10 | 441 |
fibroblast of periodontium | 3.79e-10 | 6 |
mesenchymal stem cell of the bone marrow | 3.12e-09 | 6 |
connective tissue cell | 1.15e-08 | 361 |
mesenchymal cell | 2.01e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.60e-12 | 99 |
integument | 8.37e-11 | 46 |
integumental system | 8.37e-11 | 46 |
subdivision of skeletal system | 1.25e-10 | 16 |
periodontium | 3.79e-10 | 6 |
dentition | 3.79e-10 | 6 |
axial skeletal system | 6.98e-10 | 14 |
skin of body | 1.86e-09 | 41 |
skull | 1.25e-08 | 7 |
connective tissue | 1.25e-08 | 371 |
dense mesenchyme tissue | 1.04e-07 | 73 |
cranial skeletal system | 2.49e-07 | 11 |
somite | 3.84e-07 | 71 |
presomitic mesoderm | 3.84e-07 | 71 |
presumptive segmental plate | 3.84e-07 | 71 |
dermomyotome | 3.84e-07 | 71 |
trunk paraxial mesoderm | 3.84e-07 | 71 |
paraxial mesoderm | 5.55e-07 | 72 |
presumptive paraxial mesoderm | 5.55e-07 | 72 |