FFCP PHASE1:Hg19::chr5:179757851..179757870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9945 | |EntrezGene=9945 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4242 | |HGNC=4242 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_ENST00000518185_5end | |association_with_transcript=63bp_to_ENST00000518185_5end | ||
|cluster_id=chr5:179757851..179757870,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_4_at_GFPT2_5end | |description=CAGE_peak_4_at_GFPT2_5end | ||
|id=chr5:179757851..179757870,- | |id=chr5:179757851..179757870,- | ||
|ontology_enrichment_celltype=CL:0000055!2.07e-09!180;CL:0002494!4.60e-08!16;CL:0002548!6.32e-08!6;CL:0000183!1.20e-07!59;CL:0000680!4.66e-07!57;CL:0000056!4.66e-07!57;CL:0000355!4.66e-07!57;CL:0000187!8.35e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.07e-09!180;CL:0002494!4.60e-08!16;CL:0002548!6.32e-08!6;CL:0000183!1.20e-07!59;CL:0000680!4.66e-07!57;CL:0000056!4.66e-07!57;CL:0000355!4.66e-07!57;CL:0000187!8.35e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002568;1.33e-13;1!CL:1000415;1.27e-07;2!CL:0000054;1.93e-07;2!CL:0002097;1.93e-07;2!CL:0000137;1.93e-07;2!CL:0000092;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.07e-13,1;CL:1000415,1.45e-07,2;CL:0000054,1.64e-07,2;CL:0000137,1.64e-07,2;CL:0000092,1.64e-07,2;CL:0002097,1.99e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;5.85e-14;1!DOID:0060085;1.33e-13;1!DOID:3165;1.33e-13;1!DOID:0060121;1.33e-13;1!DOID:2438;1.33e-13;1!DOID:4418;1.33e-13;1!DOID:201;3.08e-09;6!DOID:0060100;3.08e-09;6!DOID:3910;9.25e-08;2!DOID:200;1.93e-07;2!DOID:4305;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,4.53e-14,1;DOID:0060085,9.73e-14,1;DOID:3165,9.73e-14,1;DOID:0060121,9.73e-14,1;DOID:2438,9.73e-14,1;DOID:4418,9.73e-14,1;DOID:201,2.56e-09,6;DOID:0060100,2.56e-09,6;DOID:3910,9.25e-08,2;DOID:200,1.64e-07,2;DOID:4305,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.49e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.47e-20;10!UBERON:0002075;1.49e-17;18!UBERON:0002323;6.50e-08;45!UBERON:0004903;9.25e-08;2!UBERON:0002173;9.25e-08;2!UBERON:0002186;9.25e-08;2!UBERON:0000949;3.25e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.54e-20,10;UBERON:0002075,1.66e-17,18;UBERON:0002323,1.59e-09,46;UBERON:0004458,6.43e-09,49;UBERON:0003886,4.66e-08,54;UBERON:0004903,9.25e-08,2;UBERON:0002173,9.25e-08,2;UBERON:0002186,9.25e-08,2;UBERON:0002553,4.34e-07,61;UBERON:0000949,6.25e-07,45 | |||
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| ||
|short_description=p4@GFPT2 | |short_description=p4@GFPT2 | ||
}} | }} |
Latest revision as of 10:26, 17 September 2015
Short description: | p4@GFPT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFPT2_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | 63bp_to_ENST00000518185_5end |
EntrezGene: | GFPT2 |
HGNC: | 4242 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.07e-13 | 1 |
epithelial cell of gall bladder | 1.45e-07 | 2 |
bone matrix secreting cell | 1.64e-07 | 2 |
osteocyte | 1.64e-07 | 2 |
osteoclast | 1.64e-07 | 2 |
cortical cell of adrenal gland | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.54e-20 | 10 |
viscus | 1.66e-17 | 18 |
body cavity | 1.59e-09 | 46 |
body cavity or lining | 6.43e-09 | 49 |
body cavity precursor | 4.66e-08 | 54 |
bronchoalveolar duct junction | 9.25e-08 | 2 |
alveolar duct | 9.25e-08 | 2 |
bronchiole | 9.25e-08 | 2 |
anatomical cavity | 4.34e-07 | 61 |
endocrine system | 6.25e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 4.53e-14 | 1 |
organ system benign neoplasm | 9.73e-14 | 1 |
skin benign neoplasm | 9.73e-14 | 1 |
integumentary system benign neoplasm | 9.73e-14 | 1 |
dermis tumor | 9.73e-14 | 1 |
cutaneous fibrous histiocytoma | 9.73e-14 | 1 |
connective tissue cancer | 2.56e-09 | 6 |
musculoskeletal system cancer | 2.56e-09 | 6 |
lung adenocarcinoma | 9.25e-08 | 2 |
giant cell tumor | 1.64e-07 | 2 |
bone giant cell tumor | 1.64e-07 | 2 |