FFCP PHASE1:Hg19::chr11:89901127..89901133,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C311|description=CAGE_peak_at_chr11:89901127..89901133,+|id=chr11:89901127..89901133,+|ontology_enrichment_celltype=CL:0002563!8.65e-12!4;CL:0000946!1.19e-11!1;CL:0000786!1.19e-11!1;CL:0000980!1.19e-11!1;CL:0002253!9.44e-07!2|ontology_enrichment_celltype_v019=CL:0002563;3.16e-29;4!CL:0002253;1.33e-15;2!CL:0002231;8.57e-11;3!CL:0002076;3.77e-07;42|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-29,4;CL:0002253,1.33e-15,2;CL:0002231,8.17e-11,3;CL:0002076,8.88e-07,42|ontology_enrichment_development_v019=UBERON:0003104;2.80e-09;31!UBERON:0007123;6.39e-07;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;3.58e-09;14|ontology_enrichment_disease_v019_2=DOID:3119,3.58e-09,14|ontology_enrichment_uberon=UBERON:0001052!6.98e-12!4;UBERON:0001242!8.65e-12!4;UBERON:0001262!8.65e-12!4;UBERON:0004786!8.65e-12!4;UBERON:0004808!8.65e-12!4;UBERON:0001277!8.65e-12!4;UBERON:0004907!1.10e-09!5;UBERON:0003350!1.31e-09!5|ontology_enrichment_uberon_v019=UBERON:0001052;1.78e-29;4!UBERON:0001242;3.16e-29;4!UBERON:0001262;3.16e-29;4!UBERON:0004786;3.16e-29;4!UBERON:0004808;3.16e-29;4!UBERON:0001277;3.16e-29;4!UBERON:0004907;8.09e-24;5!UBERON:0000485;3.42e-17;7!UBERON:0003929;3.42e-17;7!UBERON:0003350;3.53e-15;8!UBERON:0000160;5.93e-15;17!UBERON:0005409;7.25e-12;22!UBERON:0000059;2.07e-11;11!UBERON:0004921;1.93e-07;33!UBERON:0002046;6.39e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.78e-29,4;UBERON:0001242,3.16e-29,4;UBERON:0001262,3.16e-29,4;UBERON:0004786,3.16e-29,4;UBERON:0004808,3.16e-29,4;UBERON:0001277,3.16e-29,4;UBERON:0004907,8.09e-24,5;UBERON:0003350,3.53e-15,8;UBERON:0000160,5.93e-15,17;UBERON:0001046,3.02e-14,19;UBERON:0000485,1.31e-13,9;UBERON:0000059,2.07e-11,11;UBERON:0005409,1.40e-10,25;UBERON:0003929,6.97e-09,54;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,6.9263005002631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0587323241913,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,34.7537482509098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89446745545599,0.803892390468535,0,0,0,0,0,0,2.13050538903166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:89901127..89901133,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_at_chr11:89901127..89901133,+ | |||
|id=chr11:89901127..89901133,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.65e-12!4;CL:0000946!1.19e-11!1;CL:0000786!1.19e-11!1;CL:0000980!1.19e-11!1;CL:0002253!9.44e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.16e-29;4!CL:0002253;1.33e-15;2!CL:0002231;8.57e-11;3!CL:0002076;3.77e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-29,4;CL:0002253,1.33e-15,2;CL:0002231,8.17e-11,3;CL:0002076,8.88e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.80e-09;31!UBERON:0007123;6.39e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;3.58e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.58e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001052!6.98e-12!4;UBERON:0001242!8.65e-12!4;UBERON:0001262!8.65e-12!4;UBERON:0004786!8.65e-12!4;UBERON:0004808!8.65e-12!4;UBERON:0001277!8.65e-12!4;UBERON:0004907!1.10e-09!5;UBERON:0003350!1.31e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.78e-29;4!UBERON:0001242;3.16e-29;4!UBERON:0001262;3.16e-29;4!UBERON:0004786;3.16e-29;4!UBERON:0004808;3.16e-29;4!UBERON:0001277;3.16e-29;4!UBERON:0004907;8.09e-24;5!UBERON:0000485;3.42e-17;7!UBERON:0003929;3.42e-17;7!UBERON:0003350;3.53e-15;8!UBERON:0000160;5.93e-15;17!UBERON:0005409;7.25e-12;22!UBERON:0000059;2.07e-11;11!UBERON:0004921;1.93e-07;33!UBERON:0002046;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.78e-29,4;UBERON:0001242,3.16e-29,4;UBERON:0001262,3.16e-29,4;UBERON:0004786,3.16e-29,4;UBERON:0004808,3.16e-29,4;UBERON:0001277,3.16e-29,4;UBERON:0004907,8.09e-24,5;UBERON:0003350,3.53e-15,8;UBERON:0000160,5.93e-15,17;UBERON:0001046,3.02e-14,19;UBERON:0000485,1.31e-13,9;UBERON:0000059,2.07e-11,11;UBERON:0005409,1.40e-10,25;UBERON:0003929,6.97e-09,54;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,6.9263005002631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0587323241913,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,34.7537482509098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89446745545599,0.803892390468535,0,0,0,0,0,0,2.13050538903166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:89901127..89901133,+ | |||
}} |
Revision as of 20:08, 10 September 2013
Short description: | p@chr11:89901127..89901133, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:89901127..89901133, + |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.16e-29 | 4 |
epithelial cell of large intestine | 1.33e-15 | 2 |
epithelial cell of prostate | 8.17e-11 | 3 |
endo-epithelial cell | 8.88e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.78e-29 | 4 |
intestinal mucosa | 3.16e-29 | 4 |
wall of intestine | 3.16e-29 | 4 |
gastrointestinal system mucosa | 3.16e-29 | 4 |
gastrointestinal system epithelium | 3.16e-29 | 4 |
intestinal epithelium | 3.16e-29 | 4 |
lower digestive tract | 8.09e-24 | 5 |
epithelium of mucosa | 3.53e-15 | 8 |
intestine | 5.93e-15 | 17 |
hindgut | 3.02e-14 | 19 |
simple columnar epithelium | 1.31e-13 | 9 |
large intestine | 2.07e-11 | 11 |
gastrointestinal system | 1.40e-10 | 25 |
gut epithelium | 6.97e-09 | 54 |
thyroid gland | 6.39e-07 | 5 |
pharyngeal pouch | 6.39e-07 | 5 |
thyroid diverticulum | 6.39e-07 | 5 |
pharyngeal pouch 2 | 6.39e-07 | 5 |
thyroid primordium | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.58e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.