FFCP PHASE1:Hg19::chr19:39647271..39647347,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.99e-14!180;CL:0000183!5.26e-14!59;CL:0000680!2.36e-13!57;CL:0000056!2.36e-13!57;CL:0000355!2.36e-13!57;CL:0000187!2.58e-13!54;CL:0000192!1.02e-12!42;CL:0000514!1.02e-12!42;CL:0000393!1.68e-10!60;CL:0000211!1.68e-10!60;CL:0000359!1.79e-08!32;CL:0000147!8.74e-07!14 | |ontology_enrichment_celltype=CL:0000055!1.99e-14!180;CL:0000183!5.26e-14!59;CL:0000680!2.36e-13!57;CL:0000056!2.36e-13!57;CL:0000355!2.36e-13!57;CL:0000187!2.58e-13!54;CL:0000192!1.02e-12!42;CL:0000514!1.02e-12!42;CL:0000393!1.68e-10!60;CL:0000211!1.68e-10!60;CL:0000359!1.79e-08!32;CL:0000147!8.74e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000192;7.36e-10;43!CL:0000187;1.23e-07;55!CL:0000147;1.90e-07;14!CL:0000359;2.24e-07;32!CL:0000062;5.12e-07;9 | |ontology_enrichment_celltype_v019=CL:0000192;7.36e-10;43!CL:0000187;1.23e-07;55!CL:0000147;1.90e-07;14!CL:0000359;2.24e-07;32!CL:0000062;5.12e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,6.33e-13,55;CL:0000192,1.15e-12,43;CL:0000514,1.15e-12,43;CL:0000680,1.02e-11,58;CL:0000056,1.02e-11,58;CL:0000355,1.02e-11,58;CL:0000393,1.22e-10,61;CL:0000211,1.22e-10,61;CL:0000359,5.25e-08,32;CL:0000147,1.75e-07,14;CL:0000222,4.66e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;7.36e-10;43!CL:0000355;9.10e-07;58 | |ontology_enrichment_development_v019=CL:0000514;7.36e-10;43!CL:0000355;9.10e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.31e-15!365;UBERON:0000481!2.15e-13!347;UBERON:0001134!4.36e-13!61;UBERON:0002036!4.36e-13!61;UBERON:0003082!4.36e-13!61;UBERON:0002385!5.39e-13!63;UBERON:0001015!5.39e-13!63;UBERON:0000383!5.39e-13!63;UBERON:0003104!2.36e-10!238;UBERON:0009142!2.36e-10!238;UBERON:0000483!3.38e-10!309;UBERON:0004290!5.31e-10!70;UBERON:0002100!5.46e-10!216;UBERON:0000486!9.79e-10!82;UBERON:0000119!1.23e-09!312;UBERON:0000914!7.30e-09!83;UBERON:0002329!7.30e-09!83;UBERON:0003077!7.30e-09!83;UBERON:0003059!7.30e-09!83;UBERON:0007282!7.30e-09!83;UBERON:0009618!7.30e-09!83;UBERON:0007285!7.30e-09!83;UBERON:0005256!9.05e-09!143;UBERON:0000490!8.39e-07!138 | |ontology_enrichment_uberon=UBERON:0000475!1.31e-15!365;UBERON:0000481!2.15e-13!347;UBERON:0001134!4.36e-13!61;UBERON:0002036!4.36e-13!61;UBERON:0003082!4.36e-13!61;UBERON:0002385!5.39e-13!63;UBERON:0001015!5.39e-13!63;UBERON:0000383!5.39e-13!63;UBERON:0003104!2.36e-10!238;UBERON:0009142!2.36e-10!238;UBERON:0000483!3.38e-10!309;UBERON:0004290!5.31e-10!70;UBERON:0002100!5.46e-10!216;UBERON:0000486!9.79e-10!82;UBERON:0000119!1.23e-09!312;UBERON:0000914!7.30e-09!83;UBERON:0002329!7.30e-09!83;UBERON:0003077!7.30e-09!83;UBERON:0003059!7.30e-09!83;UBERON:0007282!7.30e-09!83;UBERON:0009618!7.30e-09!83;UBERON:0007285!7.30e-09!83;UBERON:0005256!9.05e-09!143;UBERON:0000490!8.39e-07!138 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-12,62;UBERON:0002036,4.12e-12,62;UBERON:0003082,4.12e-12,62;UBERON:0002385,2.15e-11,64;UBERON:0001015,2.15e-11,64;UBERON:0000383,2.15e-11,64;UBERON:0007503,2.20e-10,78;UBERON:0002329,6.84e-10,71;UBERON:0003059,6.84e-10,71;UBERON:0007282,6.84e-10,71;UBERON:0004290,6.84e-10,71;UBERON:0009618,6.84e-10,71;UBERON:0003077,1.31e-09,72;UBERON:0007285,1.31e-09,72;UBERON:0007524,2.46e-09,73;UBERON:0000486,7.26e-09,83;UBERON:0003104,7.31e-09,160;UBERON:0009142,7.31e-09,160;UBERON:0002100,1.06e-08,199;UBERON:0005256,2.00e-07,122;UBERON:0000915,8.52e-07,52 | |||
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| ||
|short_description=p@chr19:39647271..39647347,+ | |short_description=p@chr19:39647271..39647347,+ | ||
}} | }} |
Revision as of 14:37, 18 November 2012
Short description: | p@chr19:39647271..39647347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:39647271..39647347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 6.33e-13 | 55 |
smooth muscle cell | 1.15e-12 | 43 |
smooth muscle myoblast | 1.15e-12 | 43 |
muscle precursor cell | 1.02e-11 | 58 |
myoblast | 1.02e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-11 | 58 |
electrically responsive cell | 1.22e-10 | 61 |
electrically active cell | 1.22e-10 | 61 |
vascular associated smooth muscle cell | 5.25e-08 | 32 |
pigment cell | 1.75e-07 | 14 |
mesodermal cell | 4.66e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.12e-12 | 62 |
striated muscle tissue | 4.12e-12 | 62 |
myotome | 4.12e-12 | 62 |
muscle tissue | 2.15e-11 | 64 |
musculature | 2.15e-11 | 64 |
musculature of body | 2.15e-11 | 64 |
epithelial vesicle | 2.20e-10 | 78 |
somite | 6.84e-10 | 71 |
presomitic mesoderm | 6.84e-10 | 71 |
presumptive segmental plate | 6.84e-10 | 71 |
dermomyotome | 6.84e-10 | 71 |
trunk paraxial mesoderm | 6.84e-10 | 71 |
paraxial mesoderm | 1.31e-09 | 72 |
presumptive paraxial mesoderm | 1.31e-09 | 72 |
dense mesenchyme tissue | 2.46e-09 | 73 |
multilaminar epithelium | 7.26e-09 | 83 |
mesenchyme | 7.31e-09 | 160 |
entire embryonic mesenchyme | 7.31e-09 | 160 |
trunk | 1.06e-08 | 199 |
trunk mesenchyme | 2.00e-07 | 122 |
thoracic segment of trunk | 8.52e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.