FFCP PHASE1:Hg19::chr19:42254956..42254970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42254956..42254970,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr19:42254956..42254970,+ | |description=CAGE_peak_at_chr19:42254956..42254970,+ | ||
|id=chr19:42254956..42254970,+ | |id=chr19:42254956..42254970,+ | ||
|ontology_enrichment_celltype=CL:0002178!8.28e-08!3 | |ontology_enrichment_celltype=CL:0002178!8.28e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.56e-19;1!UBERON:0008947;1.08e-15;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.63e-16!115;UBERON:0003127!1.73e-12!2;UBERON:0000065!3.18e-12!53;UBERON:0000341!4.19e-12!2;UBERON:0001004!1.10e-11!72;UBERON:0004119!1.70e-11!169;UBERON:0000925!1.70e-11!169;UBERON:0006595!1.70e-11!169;UBERON:0004921!1.28e-10!129;UBERON:0004185!1.28e-10!129;UBERON:0000077!2.02e-09!130;UBERON:0001007!2.75e-09!155;UBERON:0001555!2.75e-09!155;UBERON:0007026!2.75e-09!155;UBERON:0005383!4.56e-08!3;UBERON:0005382!4.56e-08!3;UBERON:0001041!7.01e-08!98;UBERON:0006562!8.60e-08!11;UBERON:0005178!3.63e-07!34;UBERON:0002224!3.63e-07!34;UBERON:0002171!5.13e-07!1;UBERON:0006518!5.13e-07!1;UBERON:0008949!5.13e-07!1;UBERON:0000101!5.13e-07!1;UBERON:0002167!5.13e-07!1;UBERON:0005181!6.19e-07!35;UBERON:0002372!8.03e-07!1;UBERON:0001961!8.03e-07!1;UBERON:0001744!8.03e-07!1;UBERON:0001735!8.03e-07!1;UBERON:0001736!9.48e-07!1;UBERON:0006298!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.89e-37;2!UBERON:0000341;1.70e-36;2!UBERON:0002171;1.88e-19;1!UBERON:0006518;1.88e-19;1!UBERON:0008949;1.88e-19;1!UBERON:0000101;1.88e-19;1!UBERON:0002167;1.88e-19;1!UBERON:0005178;1.71e-15;34!UBERON:0002224;1.71e-15;34!UBERON:0005181;3.17e-14;35!UBERON:0000974;6.90e-13;6!UBERON:0003126;1.87e-11;7!UBERON:0001005;1.87e-11;7!UBERON:0000065;3.95e-08;44!UBERON:0002048;5.65e-08;22!UBERON:0000117;5.65e-08;22!UBERON:0000171;5.65e-08;22!UBERON:0000170;5.65e-08;22!UBERON:0000915;5.94e-08;52!UBERON:0001043;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.89e-37,2;UBERON:0000341,3.52e-36,2;UBERON:0002171,1.88e-19,1;UBERON:0006518,1.88e-19,1;UBERON:0008949,1.88e-19,1;UBERON:0000101,1.88e-19,1;UBERON:0002167,1.88e-19,1;UBERON:0005178,4.92e-19,34;UBERON:0002224,4.92e-19,34;UBERON:0005181,1.73e-18,35;UBERON:0000915,2.04e-12,52;UBERON:0008947,4.93e-12,38;UBERON:0003258,4.93e-12,38;UBERON:0003126,1.87e-11,7;UBERON:0001005,1.87e-11,7;UBERON:0000065,1.75e-08,54;UBERON:0000974,4.83e-08,10;UBERON:0002048,5.26e-08,22;UBERON:0000117,5.26e-08,22;UBERON:0000171,5.26e-08,22;UBERON:0000170,5.26e-08,22;UBERON:0005597,5.26e-08,22;UBERON:0000118,5.26e-08,22;UBERON:0001041,2.39e-07,87;UBERON:0001043,2.63e-07,3;UBERON:0009143,2.63e-07,3 | |||
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|short_description=p@chr19:42254956..42254970,+ | |short_description=p@chr19:42254956..42254970,+ | ||
}} | }} |
Latest revision as of 08:36, 26 July 2015
Short description: | p@chr19:42254956..42254970, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42254956..42254970, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.89e-37 | 2 |
throat | 3.52e-36 | 2 |
lower lobe of right lung | 1.88e-19 | 1 |
right lung lobe | 1.88e-19 | 1 |
lower lobe of lung | 1.88e-19 | 1 |
lobe of lung | 1.88e-19 | 1 |
right lung | 1.88e-19 | 1 |
thoracic cavity element | 4.92e-19 | 34 |
thoracic cavity | 4.92e-19 | 34 |
thoracic segment organ | 1.73e-18 | 35 |
thoracic segment of trunk | 2.04e-12 | 52 |
respiratory primordium | 4.93e-12 | 38 |
endoderm of foregut | 4.93e-12 | 38 |
trachea | 1.87e-11 | 7 |
respiratory airway | 1.87e-11 | 7 |
respiratory tract | 1.75e-08 | 54 |
neck | 4.83e-08 | 10 |
lung | 5.26e-08 | 22 |
respiratory tube | 5.26e-08 | 22 |
respiration organ | 5.26e-08 | 22 |
pair of lungs | 5.26e-08 | 22 |
lung primordium | 5.26e-08 | 22 |
lung bud | 5.26e-08 | 22 |
foregut | 2.39e-07 | 87 |
esophagus | 2.63e-07 | 3 |
esophageal region | 2.63e-07 | 3 |