FFCP PHASE1:Hg19::chr2:63277724..63277757,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:63277724..63277757,- | |||
|description=CAGE_peak_at_chr2:63277724..63277757,- | |description=CAGE_peak_at_chr2:63277724..63277757,- | ||
|id=chr2:63277724..63277757,- | |id=chr2:63277724..63277757,- | ||
|ontology_enrichment_celltype=CL:0000066!6.84e-14!254;CL:0002319!5.24e-07!25 | |ontology_enrichment_celltype=CL:0000066!6.84e-14!254;CL:0002319!5.24e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.10e-25;3!CL:0000064;4.56e-25;3!CL:0000067;4.56e-25;3!CL:0005012;4.56e-25;3!CL:0002304;4.56e-25;3!CL:0002328;1.73e-11;3!CL:0000128;3.23e-11;7!CL:0000126;3.23e-11;7!CL:0000127;3.23e-11;7!CL:0002319;2.14e-10;25 | |ontology_enrichment_celltype_v019=CL:0002605;2.10e-25;3!CL:0000064;4.56e-25;3!CL:0000067;4.56e-25;3!CL:0005012;4.56e-25;3!CL:0002304;4.56e-25;3!CL:0002328;1.73e-11;3!CL:0000128;3.23e-11;7!CL:0000126;3.23e-11;7!CL:0000127;3.23e-11;7!CL:0002319;2.14e-10;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.19e-25,3;CL:0000064,3.57e-25,3;CL:0000067,3.57e-25,3;CL:0005012,3.57e-25,3;CL:0002304,3.57e-25,3;CL:0002328,1.43e-11,3;CL:0000128,3.28e-11,7;CL:0000126,3.28e-11,7;CL:0000127,3.28e-11,7;CL:0002453,3.28e-11,7;CL:0002319,1.97e-10,25;CL:0000047,1.12e-09,8;CL:0000133,1.70e-09,59;CL:0000221,2.31e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.84e-07;59 | |ontology_enrichment_development_v019=CL:0000133;1.84e-07;59 | ||
|ontology_enrichment_disease=DOID:162!1.57e-27!235;DOID:14566!1.07e-26!239;DOID:0050687!3.45e-22!143;DOID:305!1.99e-18!106;DOID:0050686!3.91e-09!137 | |ontology_enrichment_disease=DOID:162!1.57e-27!235;DOID:14566!1.07e-26!239;DOID:0050687!3.45e-22!143;DOID:305!1.99e-18!106;DOID:0050686!3.91e-09!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.03e-08!61;UBERON:0007625!1.74e-07!11;UBERON:0000019!3.66e-07!19;UBERON:0000047!3.66e-07!19;UBERON:0004088!3.66e-07!19;UBERON:0003072!3.66e-07!19;UBERON:0003071!3.66e-07!19;UBERON:0004128!3.66e-07!19;UBERON:0000020!3.90e-07!23 | |ontology_enrichment_uberon=UBERON:0003056!4.03e-08!61;UBERON:0007625!1.74e-07!11;UBERON:0000019!3.66e-07!19;UBERON:0000047!3.66e-07!19;UBERON:0004088!3.66e-07!19;UBERON:0003072!3.66e-07!19;UBERON:0003071!3.66e-07!19;UBERON:0004128!3.66e-07!19;UBERON:0000020!3.90e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.56e-25;3!UBERON:0001775;4.56e-25;3!UBERON:0000488;5.81e-19;4!UBERON:0001801;3.59e-14;14!UBERON:0002203;7.80e-13;6!UBERON:0001768;7.80e-13;6!UBERON:0002200;7.80e-13;6!UBERON:0007625;5.98e-12;11!UBERON:0004815;1.73e-11;3!UBERON:0002031;1.73e-11;3!UBERON:0000019;2.11e-10;19!UBERON:0000047;2.11e-10;19!UBERON:0004088;2.11e-10;19!UBERON:0010230;2.11e-10;19!UBERON:0000970;7.12e-10;20!UBERON:0002104;2.14e-09;21!UBERON:0001456;2.14e-09;21!UBERON:0000020;1.46e-08;23!UBERON:0001032;3.38e-08;24!UBERON:0004456;3.38e-08;24!UBERON:0002185;3.09e-07;5!UBERON:0006876;3.22e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001778;4.56e-25;3!UBERON:0001775;4.56e-25;3!UBERON:0000488;5.81e-19;4!UBERON:0001801;3.59e-14;14!UBERON:0002203;7.80e-13;6!UBERON:0001768;7.80e-13;6!UBERON:0002200;7.80e-13;6!UBERON:0007625;5.98e-12;11!UBERON:0004815;1.73e-11;3!UBERON:0002031;1.73e-11;3!UBERON:0000019;2.11e-10;19!UBERON:0000047;2.11e-10;19!UBERON:0004088;2.11e-10;19!UBERON:0010230;2.11e-10;19!UBERON:0000970;7.12e-10;20!UBERON:0002104;2.14e-09;21!UBERON:0001456;2.14e-09;21!UBERON:0000020;1.46e-08;23!UBERON:0001032;3.38e-08;24!UBERON:0004456;3.38e-08;24!UBERON:0002185;3.09e-07;5!UBERON:0006876;3.22e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.57e-25,3;UBERON:0001775,3.57e-25,3;UBERON:0000488,4.84e-19,4;UBERON:0001801,3.40e-14,14;UBERON:0002203,6.92e-13,6;UBERON:0001768,6.92e-13,6;UBERON:0002200,6.92e-13,6;UBERON:0007625,5.41e-12,11;UBERON:0004815,1.43e-11,3;UBERON:0002031,1.43e-11,3;UBERON:0000019,6.85e-10,20;UBERON:0000047,6.85e-10,20;UBERON:0010312,6.85e-10,20;UBERON:0004088,6.85e-10,20;UBERON:0010230,6.85e-10,20;UBERON:0003072,6.85e-10,20;UBERON:0004128,6.85e-10,20;UBERON:0003071,6.85e-10,20;UBERON:0000970,2.07e-09,21;UBERON:0002104,2.07e-09,21;UBERON:0003056,3.54e-09,61;UBERON:0001456,5.64e-09,22;UBERON:0000020,3.28e-08,24;UBERON:0001032,3.28e-08,24;UBERON:0004456,3.28e-08,24;UBERON:0002185,2.76e-07,5;UBERON:0006876,3.02e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,4.57977579409691,3.83248390204076,4.3939923858181,0.534893840235659,0.410502947249729,0.472264687882075,0,0,0,1.83884244895785,2.71085326900425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,3.97046232089085,4.87804674417641,2.19586964232815,0.130979075497713,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.829288440122964,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0,0.723033089650446,0,0.217879444092406,0.474541238222193,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0.579652024875384,0.821860859650752,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,3.81141936333695,0,3.86644406388848,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0,0,0.0915694648183434,0.330037999682352,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0.497992903438899,0.637705090915289,0,0,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0,7.06653757909453,7.82866377623456,4.50492682622153,0.19538809540204,0,1.23087398947712,0,0,0,0.18714054040822,0,0.485442086998054,2.78608460693696,0,0,0,0,0,0.281338832821026,0.222617410045812,0.329607748453519,3.1668811219199,0.398495976502139,0,0,0.102268682502155,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.435753854075961,0.41827123283581,0,0.113942055847001,0.23056390438806,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0.676786981851542,0.784250137270958,0.167821586975843,0.189753732724185,0.317873157960757,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0.741383633679017,0.522109747527277,0.202203398942031,0,0,0.729819156862664,0.391329237864179,0.242780379534093,0,0,0,0,0.60129367765797,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.69647365264322,0,0.343972064943233,0.19351266257817,0.219267951258557,0.410577285266046,0,0.353024506766001,0,0,0.397429223405979,0.189932387867636,0.391102765469606,0,0,0,0.144090417154106,0.687219576995494,0.686379991447858,0.432164393964449,0.621262677827163,0.235694034616795,0.135904206073614,0.104602846312333,0.407992870545287,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.709048640765013,1.07140615895516,0.741438982396034,0.492137407573744,0.338693328263138,0,0.136203406111576,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0.624902039810533,0.454947352624943,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.337884881306145,0.512483037175893,1.0362910251936,0.607719912354764,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0.422624246717254,0.39997479170986,0.320075189082423,0,0.567515953566836,0.184105950251841,0.279759015438889,0,0.127894371303652,0.431299245586727,0.629063767423586,0,0,0.637724760305049,0.123935764259002,0,0,3.39105503505389,0,0,0,0.128458450192919,0,0,0.205116364240755,0.504143392443436,0.138314504928436,0.161475645631851,0,0.196295437002051,0.353909170043221,0,0.462102664601353,0,0,0.795664888465099,0,0.40341013740704,0,0.261906694481422,0.163771917510097,0.443568258651136,0.0675375846183947,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0.255524855279191,0,0.336283722218824,0,0,0,0.691403925334676,0,0.0679697329768317,0.0657727735628491,0.472775363535873,0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| ||
|short_description=p@chr2:63277724..63277757,- | |short_description=p@chr2:63277724..63277757,- | ||
}} | }} |
Latest revision as of 11:19, 29 July 2015
Short description: | p@chr2:63277724..63277757, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:63277724..63277757, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.19e-25 | 3 |
ciliated cell | 3.57e-25 | 3 |
ciliated epithelial cell | 3.57e-25 | 3 |
multi-ciliated epithelial cell | 3.57e-25 | 3 |
non-pigmented ciliary epithelial cell | 3.57e-25 | 3 |
bronchial epithelial cell | 1.43e-11 | 3 |
oligodendrocyte | 3.28e-11 | 7 |
macroglial cell | 3.28e-11 | 7 |
astrocyte | 3.28e-11 | 7 |
oligodendrocyte precursor cell | 3.28e-11 | 7 |
neural cell | 1.97e-10 | 25 |
neuronal stem cell | 1.12e-09 | 8 |
neurectodermal cell | 1.70e-09 | 59 |
ectodermal cell | 2.31e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.57e-25 | 3 |
ciliary body | 3.57e-25 | 3 |
atypical epithelium | 4.84e-19 | 4 |
anterior segment of eyeball | 3.40e-14 | 14 |
vasculature of eye | 6.92e-13 | 6 |
uvea | 6.92e-13 | 6 |
vasculature of head | 6.92e-13 | 6 |
pigment epithelium of eye | 5.41e-12 | 11 |
lower respiratory tract epithelium | 1.43e-11 | 3 |
epithelium of bronchus | 1.43e-11 | 3 |
camera-type eye | 6.85e-10 | 20 |
simple eye | 6.85e-10 | 20 |
immature eye | 6.85e-10 | 20 |
ocular region | 6.85e-10 | 20 |
eyeball of camera-type eye | 6.85e-10 | 20 |
optic cup | 6.85e-10 | 20 |
optic vesicle | 6.85e-10 | 20 |
eye primordium | 6.85e-10 | 20 |
eye | 2.07e-09 | 21 |
visual system | 2.07e-09 | 21 |
pre-chordal neural plate | 3.54e-09 | 61 |
face | 5.64e-09 | 22 |
sense organ | 3.28e-08 | 24 |
sensory system | 3.28e-08 | 24 |
entire sense organ system | 3.28e-08 | 24 |
bronchus | 2.76e-07 | 5 |
vasculature of organ | 3.02e-07 | 11 |