FFCP PHASE1:Hg19::chrX:139846710..139846738,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.93e-34!180;CL:0000680!1.64e-16!57;CL:0000056!1.64e-16!57;CL:0000355!1.64e-16!57;CL:0000183!1.76e-16!59;CL:0000057!2.71e-16!75;CL:0000187!3.75e-15!54;CL:0000393!6.07e-15!60;CL:0000211!6.07e-15!60;CL:0000222!1.44e-12!119;CL:0000192!2.63e-12!42;CL:0000514!2.63e-12!42;CL:0000359!4.65e-09!32;CL:0002620!9.44e-09!23;CL:0000144!1.20e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.93e-34!180;CL:0000680!1.64e-16!57;CL:0000056!1.64e-16!57;CL:0000355!1.64e-16!57;CL:0000183!1.76e-16!59;CL:0000057!2.71e-16!75;CL:0000187!3.75e-15!54;CL:0000393!6.07e-15!60;CL:0000211!6.07e-15!60;CL:0000222!1.44e-12!119;CL:0000192!2.63e-12!42;CL:0000514!2.63e-12!42;CL:0000359!4.65e-09!32;CL:0002620!9.44e-09!23;CL:0000144!1.20e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.72e-09;23!CL:0000187;8.37e-08;55!CL:0002556;8.76e-08;6!CL:0000192;1.97e-07;43!CL:0000057;3.03e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;4.72e-09;23!CL:0000187;8.37e-08;55!CL:0002556;8.76e-08;6!CL:0000192;1.97e-07;43!CL:0000057;3.03e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.39e-18,76;CL:0000680,1.10e-15,58;CL:0000056,1.10e-15,58;CL:0000355,1.10e-15,58;CL:0000048,6.25e-14,427;CL:0000187,1.09e-13,55;CL:0000723,2.74e-13,433;CL:0000034,1.82e-12,441;CL:0000393,1.98e-11,61;CL:0000211,1.98e-11,61;CL:0000192,1.94e-10,43;CL:0000514,1.94e-10,43;CL:0002620,4.46e-09,23;CL:0000222,4.05e-08,121;CL:0002556,1.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000355;3.41e-09;58!CL:0000514;1.97e-07;43 | |ontology_enrichment_development_v019=CL:0000355;3.41e-09;58!CL:0000514;1.97e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.59e-19!83;UBERON:0002329!2.59e-19!83;UBERON:0003077!2.59e-19!83;UBERON:0003059!2.59e-19!83;UBERON:0007282!2.59e-19!83;UBERON:0009618!2.59e-19!83;UBERON:0007285!2.59e-19!83;UBERON:0004290!3.85e-17!70;UBERON:0005256!1.99e-15!143;UBERON:0001134!2.48e-15!61;UBERON:0002036!2.48e-15!61;UBERON:0003082!2.48e-15!61;UBERON:0000486!7.04e-15!82;UBERON:0002385!3.70e-14!63;UBERON:0001015!3.70e-14!63;UBERON:0000383!3.70e-14!63;UBERON:0000475!7.06e-13!365;UBERON:0002049!1.90e-11!79;UBERON:0007798!1.90e-11!79;UBERON:0002100!1.93e-10!216;UBERON:0000119!2.27e-10!312;UBERON:0001981!4.79e-10!60;UBERON:0007500!4.79e-10!60;UBERON:0004537!4.79e-10!60;UBERON:0006965!4.79e-10!60;UBERON:0003914!9.01e-10!118;UBERON:0000483!9.53e-10!309;UBERON:0004872!1.01e-09!84;UBERON:0000490!1.99e-09!138;UBERON:0004535!2.39e-09!110;UBERON:0001009!8.23e-09!113;UBERON:0000055!1.41e-08!69;UBERON:0003102!1.89e-08!95;UBERON:0001637!2.64e-08!42;UBERON:0003509!2.64e-08!42;UBERON:0004572!2.64e-08!42;UBERON:0002199!3.63e-08!45;UBERON:0002416!3.63e-08!45;UBERON:0004573!1.84e-07!33;UBERON:0004571!1.84e-07!33;UBERON:0002097!6.41e-07!40;UBERON:0003104!8.76e-07!238;UBERON:0009142!8.76e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!2.59e-19!83;UBERON:0002329!2.59e-19!83;UBERON:0003077!2.59e-19!83;UBERON:0003059!2.59e-19!83;UBERON:0007282!2.59e-19!83;UBERON:0009618!2.59e-19!83;UBERON:0007285!2.59e-19!83;UBERON:0004290!3.85e-17!70;UBERON:0005256!1.99e-15!143;UBERON:0001134!2.48e-15!61;UBERON:0002036!2.48e-15!61;UBERON:0003082!2.48e-15!61;UBERON:0000486!7.04e-15!82;UBERON:0002385!3.70e-14!63;UBERON:0001015!3.70e-14!63;UBERON:0000383!3.70e-14!63;UBERON:0000475!7.06e-13!365;UBERON:0002049!1.90e-11!79;UBERON:0007798!1.90e-11!79;UBERON:0002100!1.93e-10!216;UBERON:0000119!2.27e-10!312;UBERON:0001981!4.79e-10!60;UBERON:0007500!4.79e-10!60;UBERON:0004537!4.79e-10!60;UBERON:0006965!4.79e-10!60;UBERON:0003914!9.01e-10!118;UBERON:0000483!9.53e-10!309;UBERON:0004872!1.01e-09!84;UBERON:0000490!1.99e-09!138;UBERON:0004535!2.39e-09!110;UBERON:0001009!8.23e-09!113;UBERON:0000055!1.41e-08!69;UBERON:0003102!1.89e-08!95;UBERON:0001637!2.64e-08!42;UBERON:0003509!2.64e-08!42;UBERON:0004572!2.64e-08!42;UBERON:0002199!3.63e-08!45;UBERON:0002416!3.63e-08!45;UBERON:0004573!1.84e-07!33;UBERON:0004571!1.84e-07!33;UBERON:0002097!6.41e-07!40;UBERON:0003104!8.76e-07!238;UBERON:0009142!8.76e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;8.76e-08;6!UBERON:0003672;8.76e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0001758;8.76e-08;6!UBERON:0003672;8.76e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.37e-16,78;UBERON:0002329,1.22e-14,71;UBERON:0003059,1.22e-14,71;UBERON:0007282,1.22e-14,71;UBERON:0004290,1.22e-14,71;UBERON:0009618,1.22e-14,71;UBERON:0003077,2.82e-14,72;UBERON:0007285,2.82e-14,72;UBERON:0001134,5.35e-14,62;UBERON:0002036,5.35e-14,62;UBERON:0003082,5.35e-14,62;UBERON:0007524,6.32e-14,73;UBERON:0002385,3.06e-13,64;UBERON:0001015,3.06e-13,64;UBERON:0000383,3.06e-13,64;UBERON:0000486,6.29e-11,83;UBERON:0005256,3.27e-10,122;UBERON:0003102,1.94e-08,99;UBERON:0002199,2.02e-08,46;UBERON:0002416,2.02e-08,46;UBERON:0001758,1.69e-07,6;UBERON:0003672,1.69e-07,6;UBERON:0003104,4.65e-07,160;UBERON:0009142,4.65e-07,160;UBERON:0000490,6.04e-07,148 | |||
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| ||
|short_description=p@chrX:139846710..139846738,+ | |short_description=p@chrX:139846710..139846738,+ | ||
}} | }} |
Revision as of 09:47, 17 November 2012
Short description: | p@chrX:139846710..139846738, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:139846710..139846738, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.39e-18 | 76 |
muscle precursor cell | 1.10e-15 | 58 |
myoblast | 1.10e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-15 | 58 |
multi fate stem cell | 6.25e-14 | 427 |
muscle cell | 1.09e-13 | 55 |
somatic stem cell | 2.74e-13 | 433 |
stem cell | 1.82e-12 | 441 |
electrically responsive cell | 1.98e-11 | 61 |
electrically active cell | 1.98e-11 | 61 |
smooth muscle cell | 1.94e-10 | 43 |
smooth muscle myoblast | 1.94e-10 | 43 |
skin fibroblast | 4.46e-09 | 23 |
mesodermal cell | 4.05e-08 | 121 |
fibroblast of periodontium | 1.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.37e-16 | 78 |
somite | 1.22e-14 | 71 |
presomitic mesoderm | 1.22e-14 | 71 |
presumptive segmental plate | 1.22e-14 | 71 |
dermomyotome | 1.22e-14 | 71 |
trunk paraxial mesoderm | 1.22e-14 | 71 |
paraxial mesoderm | 2.82e-14 | 72 |
presumptive paraxial mesoderm | 2.82e-14 | 72 |
skeletal muscle tissue | 5.35e-14 | 62 |
striated muscle tissue | 5.35e-14 | 62 |
myotome | 5.35e-14 | 62 |
dense mesenchyme tissue | 6.32e-14 | 73 |
muscle tissue | 3.06e-13 | 64 |
musculature | 3.06e-13 | 64 |
musculature of body | 3.06e-13 | 64 |
multilaminar epithelium | 6.29e-11 | 83 |
trunk mesenchyme | 3.27e-10 | 122 |
surface structure | 1.94e-08 | 99 |
integument | 2.02e-08 | 46 |
integumental system | 2.02e-08 | 46 |
periodontium | 1.69e-07 | 6 |
dentition | 1.69e-07 | 6 |
mesenchyme | 4.65e-07 | 160 |
entire embryonic mesenchyme | 4.65e-07 | 160 |
unilaminar epithelium | 6.04e-07 | 148 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.