FFCP PHASE2:Hg19::chr1:27320382..27320395,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@TRNP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_TRNP1_5end |
| Coexpression cluster: | C3963_Mesenchymal_Smooth_Fibroblast_Alveolar_Keratocytes_Hair_Renal |
| Association with transcript: | -414bp_to_ENST00000531285_5end |
| EntrezGene: | TRNP1 |
| HGNC: | 34348 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@TRNP1 |
|---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 7.16e-18 | 76 |
| embryonic cell | 7.03e-14 | 250 |
| mesodermal cell | 2.60e-13 | 121 |
| skin fibroblast | 4.47e-11 | 23 |
| muscle precursor cell | 7.91e-11 | 58 |
| myoblast | 7.91e-11 | 58 |
| multi-potent skeletal muscle stem cell | 7.91e-11 | 58 |
| muscle cell | 3.06e-10 | 55 |
| epithelial cell of nephron | 8.71e-10 | 15 |
| electrically responsive cell | 1.07e-09 | 61 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| cell layer | 5.79e-26 | 309 |
| epithelium | 1.35e-24 | 306 |
| mesenchyme | 7.78e-16 | 160 |
| entire embryonic mesenchyme | 7.78e-16 | 160 |
| trunk | 2.33e-15 | 199 |
| epithelial vesicle | 1.38e-14 | 78 |
| trunk mesenchyme | 3.63e-14 | 122 |
| surface structure | 1.21e-12 | 99 |
| anatomical conduit | 5.28e-12 | 240 |
| dense mesenchyme tissue | 7.04e-12 | 73 |
Showing 1 to 10 of 48 entries
