FFCP PHASE2:Hg19::chr5:179250894..179250918,+
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| Short description: | p10@SQSTM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_SQSTM1_5end |
| Coexpression cluster: | C4489_Osteoblast_CD14_leiomyoma_Monocytederived_mesothelioma_Prostate_mesenchymal |
| Association with transcript: | 36bp_to_ENST00000466342_5end |
| EntrezGene: | SQSTM1 |
| HGNC: | 11280 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p10@SQSTM1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid lineage restricted progenitor cell | 9.29e-27 | 66 |
| defensive cell | 1.56e-26 | 48 |
| phagocyte | 1.56e-26 | 48 |
| granulocyte monocyte progenitor cell | 3.27e-26 | 67 |
| myeloid leukocyte | 1.59e-25 | 72 |
| classical monocyte | 3.37e-24 | 42 |
| CD14-positive, CD16-negative classical monocyte | 3.37e-24 | 42 |
| monopoietic cell | 5.08e-23 | 59 |
| monocyte | 5.08e-23 | 59 |
| monoblast | 5.08e-23 | 59 |
Showing 1 to 10 of 24 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 6.05e-22 | 76 |
| bone element | 1.25e-19 | 82 |
| skeletal element | 3.67e-18 | 90 |
| skeletal system | 1.41e-17 | 100 |
| immune system | 2.29e-17 | 93 |
| hematopoietic system | 7.12e-15 | 98 |
| blood island | 7.12e-15 | 98 |
| hemolymphoid system | 1.28e-13 | 108 |
| musculoskeletal system | 1.07e-12 | 167 |
| mesoderm | 1.18e-12 | 315 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 1.64e-07 | 3 |
| leiomyoma | 1.64e-07 | 3 |
Showing 1 to 2 of 2 entries
