FFCP PHASE1:Mm9::chr1:34496700..34496755,+: Difference between revisions
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|id=chr1:34496700..34496755,+ | |id=chr1:34496700..34496755,+ | ||
|ontology_enrichment_celltype=CL:0000219!7.50e-21!54;CL:0002320!8.24e-20!46;CL:0000134!8.24e-20!46;CL:0000988!3.07e-17!32;CL:0002032!3.07e-17!32;CL:0000037!3.07e-17!32;CL:0000566!3.07e-17!32;CL:0000837!3.07e-17!32;CL:0002031!2.19e-14!25;CL:0000063!1.19e-13!66;CL:0000049!1.51e-10!19;CL:0000034!7.54e-10!97;CL:0000738!2.79e-09!17;CL:0002087!2.79e-09!17;CL:0000763!3.95e-09!16;CL:0000144!7.66e-09!121;CL:0000012!7.66e-09!121;CL:0000838!2.22e-08!12;CL:0000548!6.45e-08!115;CL:0000004!6.45e-08!115;CL:0000255!6.45e-08!115;CL:0002371!6.86e-08!118;CL:0000542!8.48e-08!13;CL:0000051!8.48e-08!13;CL:0000084!8.87e-08!11;CL:0000827!8.87e-08!11;CL:0000723!1.33e-07!91;CL:0000048!1.33e-07!91;CL:0000839!2.40e-07!13;CL:0000791!4.52e-07!9;CL:0000789!4.52e-07!9;CL:0002420!4.52e-07!9;CL:0002419!4.52e-07!9;CL:0000790!4.52e-07!9 | |ontology_enrichment_celltype=CL:0000219!7.50e-21!54;CL:0002320!8.24e-20!46;CL:0000134!8.24e-20!46;CL:0000988!3.07e-17!32;CL:0002032!3.07e-17!32;CL:0000037!3.07e-17!32;CL:0000566!3.07e-17!32;CL:0000837!3.07e-17!32;CL:0002031!2.19e-14!25;CL:0000063!1.19e-13!66;CL:0000049!1.51e-10!19;CL:0000034!7.54e-10!97;CL:0000738!2.79e-09!17;CL:0002087!2.79e-09!17;CL:0000763!3.95e-09!16;CL:0000144!7.66e-09!121;CL:0000012!7.66e-09!121;CL:0000838!2.22e-08!12;CL:0000548!6.45e-08!115;CL:0000004!6.45e-08!115;CL:0000255!6.45e-08!115;CL:0002371!6.86e-08!118;CL:0000542!8.48e-08!13;CL:0000051!8.48e-08!13;CL:0000084!8.87e-08!11;CL:0000827!8.87e-08!11;CL:0000723!1.33e-07!91;CL:0000048!1.33e-07!91;CL:0000839!2.40e-07!13;CL:0000791!4.52e-07!9;CL:0000789!4.52e-07!9;CL:0002420!4.52e-07!9;CL:0002419!4.52e-07!9;CL:0000790!4.52e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.50e-21,54;CL:0002320,8.24e-20,46;CL:0000134,8.24e-20,46;CL:0000988,3.07e-17,32;CL:0002032,3.07e-17,32;CL:0000037,3.07e-17,32;CL:0000837,3.07e-17,32;CL:0002031,2.19e-14,25;CL:0000049,1.51e-10,19;CL:0000034,7.54e-10,97;CL:0000738,2.79e-09,17;CL:0002087,2.79e-09,17;CL:0000763,3.95e-09,16;CL:0000838,2.22e-08,12;CL:0000542,8.48e-08,13;CL:0000051,8.48e-08,13;CL:0000084,8.87e-08,11;CL:0000827,8.87e-08,11;CL:0000723,1.33e-07,91;CL:0000048,1.33e-07,91;CL:0000839,2.40e-07,13;CL:0000791,4.52e-07,9;CL:0000789,4.52e-07,9;CL:0002420,4.52e-07,9;CL:0002419,4.52e-07,9;CL:0000790,4.52e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.02e-20!70;UBERON:0002384!8.24e-20!46;UBERON:0002193!2.75e-14!48;UBERON:0002390!5.49e-13!45;UBERON:0003061!5.49e-13!45;UBERON:0005057!8.92e-11!51;UBERON:0002530!1.83e-09!65;UBERON:0003929!2.30e-09!55;UBERON:0002368!3.42e-09!60;UBERON:0002371!4.51e-09!16;UBERON:0000949!3.66e-07!72;UBERON:0004119!5.06e-07!130;UBERON:0000925!5.06e-07!130;UBERON:0006595!5.06e-07!130;UBERON:0000490!9.95e-07!66 | |ontology_enrichment_uberon=UBERON:0002405!5.02e-20!70;UBERON:0002384!8.24e-20!46;UBERON:0002193!2.75e-14!48;UBERON:0002390!5.49e-13!45;UBERON:0003061!5.49e-13!45;UBERON:0005057!8.92e-11!51;UBERON:0002530!1.83e-09!65;UBERON:0003929!2.30e-09!55;UBERON:0002368!3.42e-09!60;UBERON:0002371!4.51e-09!16;UBERON:0000949!3.66e-07!72;UBERON:0004119!5.06e-07!130;UBERON:0000925!5.06e-07!130;UBERON:0006595!5.06e-07!130;UBERON:0000490!9.95e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.24e-20,46;UBERON:0002193,2.75e-14,48;UBERON:0002405,2.75e-14,48;UBERON:0002390,5.49e-13,45;UBERON:0003061,5.49e-13,45;UBERON:0002530,1.83e-09,65;UBERON:0003929,2.30e-09,55;UBERON:0002368,3.42e-09,60;UBERON:0002371,4.51e-09,16;UBERON:0004119,3.61e-08,118;UBERON:0000925,3.61e-08,118;UBERON:0006595,3.61e-08,118;UBERON:0001007,9.70e-08,116;UBERON:0001555,9.70e-08,116;UBERON:0007026,9.70e-08,116;UBERON:0004921,3.35e-07,114;UBERON:0000949,3.66e-07,72;UBERON:0000490,9.95e-07,66 | |||
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| ||
|short_description=p1@Imp4 | |short_description=p1@Imp4 | ||
}} | }} |
Revision as of 08:58, 14 November 2012
Short description: | p1@Imp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Imp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000137794, ENSMUST00000149962_5end |
EntrezGene: | Imp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 7.50e-21 | 54 |
connective tissue cell | 8.24e-20 | 46 |
mesenchymal cell | 8.24e-20 | 46 |
hematopoietic cell | 3.07e-17 | 32 |
hematopoietic oligopotent progenitor cell | 3.07e-17 | 32 |
hematopoietic stem cell | 3.07e-17 | 32 |
hematopoietic multipotent progenitor cell | 3.07e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 2.19e-14 | 25 |
common myeloid progenitor | 1.51e-10 | 19 |
stem cell | 7.54e-10 | 97 |
leukocyte | 2.79e-09 | 17 |
nongranular leukocyte | 2.79e-09 | 17 |
myeloid cell | 3.95e-09 | 16 |
lymphoid lineage restricted progenitor cell | 2.22e-08 | 12 |
lymphocyte | 8.48e-08 | 13 |
common lymphoid progenitor | 8.48e-08 | 13 |
T cell | 8.87e-08 | 11 |
pro-T cell | 8.87e-08 | 11 |
somatic stem cell | 1.33e-07 | 91 |
multi fate stem cell | 1.33e-07 | 91 |
myeloid lineage restricted progenitor cell | 2.40e-07 | 13 |
mature alpha-beta T cell | 4.52e-07 | 9 |
alpha-beta T cell | 4.52e-07 | 9 |
immature T cell | 4.52e-07 | 9 |
mature T cell | 4.52e-07 | 9 |
immature alpha-beta T cell | 4.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.24e-20 | 46 |
hemolymphoid system | 2.75e-14 | 48 |
immune system | 2.75e-14 | 48 |
hematopoietic system | 5.49e-13 | 45 |
blood island | 5.49e-13 | 45 |
gland | 1.83e-09 | 65 |
gut epithelium | 2.30e-09 | 55 |
endocrine gland | 3.42e-09 | 60 |
bone marrow | 4.51e-09 | 16 |
endoderm-derived structure | 3.61e-08 | 118 |
endoderm | 3.61e-08 | 118 |
presumptive endoderm | 3.61e-08 | 118 |
digestive system | 9.70e-08 | 116 |
digestive tract | 9.70e-08 | 116 |
primitive gut | 9.70e-08 | 116 |
subdivision of digestive tract | 3.35e-07 | 114 |
endocrine system | 3.66e-07 | 72 |
unilaminar epithelium | 9.95e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.