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FFCP PHASE1:Mm9::chr2:25127900..25127941,-: Difference between revisions

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|id=chr2:25127900..25127941,-
|id=chr2:25127900..25127941,-
|ontology_enrichment_celltype=CL:0002319!9.40e-13!43;CL:0000221!1.04e-12!44;CL:0000133!1.04e-12!44;CL:0000055!6.34e-12!50;CL:0000540!3.94e-10!33;CL:0000047!3.94e-10!33;CL:0000031!3.94e-10!33;CL:0000404!3.94e-10!33;CL:0000723!9.32e-10!91;CL:0000048!9.32e-10!91;CL:0000393!2.52e-09!39;CL:0000211!2.52e-09!39;CL:0000117!1.73e-08!23;CL:0000337!1.73e-08!23;CL:0000034!8.94e-08!97;CL:0002371!2.78e-07!118;CL:0002321!9.16e-07!70;CL:0000220!9.16e-07!70
|ontology_enrichment_celltype=CL:0002319!9.40e-13!43;CL:0000221!1.04e-12!44;CL:0000133!1.04e-12!44;CL:0000055!6.34e-12!50;CL:0000540!3.94e-10!33;CL:0000047!3.94e-10!33;CL:0000031!3.94e-10!33;CL:0000404!3.94e-10!33;CL:0000723!9.32e-10!91;CL:0000048!9.32e-10!91;CL:0000393!2.52e-09!39;CL:0000211!2.52e-09!39;CL:0000117!1.73e-08!23;CL:0000337!1.73e-08!23;CL:0000034!8.94e-08!97;CL:0002371!2.78e-07!118;CL:0002321!9.16e-07!70;CL:0000220!9.16e-07!70
|ontology_enrichment_celltype_v019_2=CL:0002319,9.40e-13,43;CL:0000221,1.04e-12,44;CL:0000133,1.04e-12,44;CL:0000540,3.94e-10,33;CL:0000047,3.94e-10,33;CL:0000031,3.94e-10,33;CL:0000404,3.94e-10,33;CL:0000723,9.32e-10,91;CL:0000048,9.32e-10,91;CL:0000393,2.52e-09,39;CL:0000211,2.52e-09,39;CL:0000117,1.73e-08,23;CL:0000337,1.73e-08,23;CL:0000034,8.94e-08,97;CL:0002321,9.16e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.14e-12!75;UBERON:0001016!4.14e-12!75;UBERON:0001017!4.69e-12!73;UBERON:0005743!4.69e-12!73;UBERON:0002020!3.73e-10!34;UBERON:0002780!1.15e-08!39;UBERON:0001890!1.15e-08!39;UBERON:0006240!1.15e-08!39;UBERON:0002791!1.54e-08!29;UBERON:0003528!1.54e-08!29;UBERON:0001893!1.54e-08!29;UBERON:0001049!3.66e-08!52;UBERON:0005068!3.66e-08!52;UBERON:0006241!3.66e-08!52;UBERON:0007135!3.66e-08!52;UBERON:0003080!4.19e-08!40;UBERON:0003056!1.53e-07!49;UBERON:0004121!2.80e-07!102;UBERON:0000924!2.80e-07!102;UBERON:0006601!2.80e-07!102;UBERON:0002346!6.03e-07!71;UBERON:0003075!6.03e-07!71;UBERON:0007284!6.03e-07!71;UBERON:0002616!7.29e-07!49;UBERON:0000956!8.02e-07!21;UBERON:0001869!8.02e-07!21;UBERON:0000203!8.02e-07!21
|ontology_enrichment_uberon=UBERON:0000073!4.14e-12!75;UBERON:0001016!4.14e-12!75;UBERON:0001017!4.69e-12!73;UBERON:0005743!4.69e-12!73;UBERON:0002020!3.73e-10!34;UBERON:0002780!1.15e-08!39;UBERON:0001890!1.15e-08!39;UBERON:0006240!1.15e-08!39;UBERON:0002791!1.54e-08!29;UBERON:0003528!1.54e-08!29;UBERON:0001893!1.54e-08!29;UBERON:0001049!3.66e-08!52;UBERON:0005068!3.66e-08!52;UBERON:0006241!3.66e-08!52;UBERON:0007135!3.66e-08!52;UBERON:0003080!4.19e-08!40;UBERON:0003056!1.53e-07!49;UBERON:0004121!2.80e-07!102;UBERON:0000924!2.80e-07!102;UBERON:0006601!2.80e-07!102;UBERON:0002346!6.03e-07!71;UBERON:0003075!6.03e-07!71;UBERON:0007284!6.03e-07!71;UBERON:0002616!7.29e-07!49;UBERON:0000956!8.02e-07!21;UBERON:0001869!8.02e-07!21;UBERON:0000203!8.02e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.14e-12,75;UBERON:0001017,4.69e-12,73;UBERON:0002020,3.73e-10,34;UBERON:0002780,1.15e-08,39;UBERON:0001890,1.15e-08,39;UBERON:0006240,1.15e-08,39;UBERON:0003528,1.54e-08,29;UBERON:0002791,1.54e-08,29;UBERON:0001893,1.54e-08,29;UBERON:0004121,1.60e-08,95;UBERON:0000924,1.60e-08,95;UBERON:0006601,1.60e-08,95;UBERON:0002346,1.61e-08,64;UBERON:0003075,1.61e-08,64;UBERON:0007284,1.61e-08,64;UBERON:0000073,2.60e-08,54;UBERON:0001049,3.66e-08,52;UBERON:0005068,3.66e-08,52;UBERON:0006241,3.66e-08,52;UBERON:0007135,3.66e-08,52;UBERON:0003080,4.19e-08,40;UBERON:0003056,1.53e-07,49;UBERON:0002616,2.91e-07,46;UBERON:0000955,7.65e-07,47;UBERON:0006238,7.65e-07,47;UBERON:0000956,8.02e-07,21;UBERON:0001869,8.02e-07,21;UBERON:0000203,8.02e-07,21
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55116,30.0912811347736,25.5972657747669,25.2996838177507,24.8933322670642,21.4434310751865,15.6215031320885,19.8934515907862,12.8318823558875,14.9121435140862,80.6080902318392,22.1284488145089,32.4298641295911,25.0842032963821,30.8691978111777,20.6126473098749,21.7110891494645,20.3118840356562,22.0204623293993,78.514839268452,48.9651010638371,27.1769563740233,35.0714622451984,37.3867884079971,32.7400473904043,35.9843658291638,34.3718743771588,32.3325759208716,32.1963169240578,28.8764046851702,31.7020315684799,27.6263747274943,28.750074818227,34.0589919406766,33.076163317384,16.7780483875256,20.644693663788,20.185617737132,17.124230869136,15.8415467106396,14.451550609741,9.34073283763052,18.4356806007997,11.034586288778,28.2375921308533,29.0004898999521,34.9466263198032,32.1365450982696,36.309373547844,40.0358765616541,38.4762825132129,35.5753750547134,29.0011141749891,27.4412965228465,33.6271006172732,19.1531939232495,25.0978400458577,26.2555254433758,35.005398158873,30.7018659111524,19.1132185909389,22.0457511245617,19.8969909946925,23.753537905797,26.6153264884752,22.257908283557,23.2230938525308,17.7989923685537,18.0347372520626,21.9095097990214,21.3227159738534,19.0980128259068,24.3130681473951,23.699026141638,23.6579784145937,17.7475806159337,24.3204913746267,20.4938447451583,20.7981730717881,22.3382564834026,21.4025728261144,23.1501346065302,24.1731322645634,22.4456908663095,21.828843334848,20.3904278517416,24.5538625901814,22.0010314484072,21.2197272079256,18.485982767408,24.5628188867679,12.8922632428979,18.9375448748155,15.0002165001271,19.9406338633562
|phase1_expression=26.424559772291,4.53668029931169,8.64498554840118,11.1911758183527,9.01612313903425,19.3061162698673,16.3528848416868,27.6323912164973,5.06839399746,4.21316147379588,8.73211637950075,11.8062795313098,19.3456824822262,20.1941129587884,43.6373787978518,38.0653502692873,53.1667027377391,21.7668894097184,20.2929361736493,30.1316652776601,26.6185498172848,24.0284101906142,32.6499736423669,15.5192650109604,16.9762867989706,13.7815671387605,10.7690499039769,8.83432054012145,11.5914285868388,12.6015064879965,15.9645967671819,60.9629446521246,39.3641464054125,15.8481681015439,37.839562187417,36.2391526881513,30.421234083093,47.7126059040075,44.5361146378566,30.8879008944541,36.4703522579229,36.2014107027976,30.5871522409627,21.4024590558481,19.9712554502444,15.9685674380663,33.6428278069657,47.9655344036982,27.02140047634,27.8034755676225,30.0970806494529,48.8758718840903,10.9058693937529,10.8804321301702,16.1325023588383,31.3856511963855,25.7880095944881,34.0343580903112,34.3937983461316,44.9642332381228,46.9035238594573,49.8101462141624,64.029225320002,40.0455374190223,43.5101199529469,59.6803296554724,31.7576117149509,40.7271403640848,37.5356396556689,41.5818290061607,44.588891806493,41.9906947073591,43.7319711084195,44.0966877173835,45.9099806177352,55.1531271966013,23.1243350098716,22.8560335172486,20.5832754563366,38.6426823049468,37.0524956589759,45.8403766089949,28.1974828991395,35.4540444319958,25.2117108831737,31.2306300602088,26.9082476710305,31.1287074528252,26.3527152799481,24.5607570347053,14.2033599463822,24.9522924324602,10.1995700056163,20.5087212822371,14.9448576012964,9.40856462904405,20.0835520788405,27.7801425802234,47.2810528377221,38.1606740471167,25.4926589795792,17.9657068380045,30.5766287647975,21.3320010945999,29.4427815775251,27.6162253367857,25.7817466957539,13.5878816865681,9.06282592765101,9.94562331734326,29.6659908770092,24.6617037432834,22.3697032338377,20.0461111934988,13.9930561491489,14.702991185572,15.5732829672656,10.5557530551536,35.384422077995,16.985519244478,18.7715290691335,24.2437626567611,11.1835056730873,17.5668478206928,15.4990563041957,11.7510245395952,16.1750418082992,25.7958174327165,19.4417447421789,16.1773890557209,20.1300265240196,31.7905510845547,19.2944995413427,28.640131220997,20.778804455956,24.3361894601636,21.7936238639677,20.7759640918855,17.9433158487909,11.3638602178696,25.893968149578,43.9113019467933,30.6105620669094,26.3733431212501,22.7241907165435,26.6476538192488,26.611289774963,11.9003550539947,27.377135102471,22.1254113796349,30.6154956045271,29.372228145295,31.6973864117182,24.3776516565517,24.2822920961373,24.8792833523116,23.1730351813367,27.0215302470451,23.8697339492298,20.0911999359437,21.1073453982987,26.6491850962302,26.0419209143731,21.447301260467,28.6936829970524,22.5557926407896,24.4128795273653,20.4339349142547,21.7219001885794,18.3867559768587,16.2137619091711,17.6901984784652,16.4662586468288,18.2520729514106,23.5524742391823,27.6813407300275,4.62586296177317,10.0491215332147,29.4337785738623,27.6361639513922,21.1342636568233,16.3363654944907,18.902133726814,17.5007576023554,13.7613427847908,15.9757986082291,18.5988054512199,17.3092130675801,17.7417319278399,17.0775687644302,12.9682829924817,9.16049856970089,35.6575653791794,22.3927084715069,19.1603150644237,21.1797380959127,22.4984885114446,13.8868923382831,12.2678882021059,14.3181843540214,12.0889020437859,14.5608653427725,12.7474629647474,26.1946815974268,26.142346350056,30.5812472843401,26.1689556591169,24.8412474544989,32.5921090280217,27.331133057827,13.2950885955529,19.4938603363538,8.62609239164127,19.3513292787622,16.5379966750717,18.9434158460334,17.9397413521912,14.9557491622644,14.5955020231618,40.9301449424247,22.3262017725575,35.4767229270143,29.8056615326398,23.2833697844124,19.7576221935391,15.2204245329083,13.7142575372386,15.0595988961167,15.1482030224613,20.3190510247515,15.3689633860647,19.238324791341,27.142431109069,29.3709069262103,21.6376280128376,12.9690270763224,22.4770825982909,15.3547309435786,18.5246488275643,13.6334300690361,38.1764945493671,35.5299257309941,24.3428439438063,34.4115069051675,28.2954316084641,24.9107347094173,29.9559919239422,30.1023533648651,28.8560077900962,16.708708453934,15.7553494581178,32.764071074775,19.7093220817827,12.7026994688852,7.96470830039777,32.0470439724576,27.8137672407571,19.8035333743693,25.3959627877465,18.1386737286917,16.2809824695979,12.7236805317127,16.7553767840819,12.009396801561,6.32511651449993,16.5016869197099,23.1498931912576,29.1698972330723,37.2553009294333,34.5082626400864,21.4581682707151,27.2904290931168,26.4923923169415,24.6616608782825,13.1416156515678,24.3606881493393,16.9806866502321,19.1268053412117,17.5996225098537,16.7669931300273,18.9802026964987,20.3534715683876,13.9910801582328,13.7214723487777,28.1936953316457,27.6558403070718,29.0755407970447,39.1806390569757,31.0295896926727,37.9771767522828,13.5982743995084,11.6159705428636,14.5109972494645,22.9120948323627,28.3120714255116,30.0912811347736,25.5972657747669,25.2996838177507,24.8933322670642,21.4434310751865,15.6215031320885,19.8934515907862,12.8318823558875,14.9121435140862,80.6080902318392,22.1284488145089,32.4298641295911,25.0842032963821,30.8691978111777,20.6126473098749,21.7110891494645,20.3118840356562,22.0204623293993,78.514839268452,48.9651010638371,27.1769563740233,35.0714622451984,37.3867884079971,32.7400473904043,35.9843658291638,34.3718743771588,32.3325759208716,32.1963169240578,28.8764046851702,31.7020315684799,27.6263747274943,28.750074818227,34.0589919406766,33.076163317384,16.7780483875256,20.644693663788,20.185617737132,17.124230869136,15.8415467106396,14.451550609741,9.34073283763052,18.4356806007997,11.034586288778,28.2375921308533,29.0004898999521,34.9466263198032,32.1365450982696,36.309373547844,40.0358765616541,38.4762825132129,35.5753750547134,29.0011141749891,27.4412965228465,33.6271006172732,19.1531939232495,25.0978400458577,26.2555254433758,35.005398158873,30.7018659111524,19.1132185909389,22.0457511245617,19.8969909946925,23.753537905797,26.6153264884752,22.257908283557,23.2230938525308,17.7989923685537,18.0347372520626,21.9095097990214,21.3227159738534,19.0980128259068,24.3130681473951,23.699026141638,23.6579784145937,17.7475806159337,24.3204913746267,20.4938447451583,20.7981730717881,22.3382564834026,21.4025728261144,23.1501346065302,24.1731322645634,22.4456908663095,21.828843334848,20.3904278517416,24.5538625901814,22.0010314484072,21.2197272079256,18.485982767408,24.5628188867679,12.8922632428979,18.9375448748155,15.0002165001271,19.9406338633562
|short_description=p1@Ssna1
|short_description=p1@Ssna1
}}
}}

Revision as of 19:07, 14 November 2012

Short description:p1@Ssna1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ssna1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000028342, ENSMUST00000127176, ENSMUST00000133697, NM_023464, uc008irb.1, uc008irc.1_5end
EntrezGene:Ssna1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ssna1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.35
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A143.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A338.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A553.17
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.65
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.98
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I28.83
Ileum epithelium, pool1.CNhs13199.10252-104B911.59
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I360.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G639.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G847.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H144.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G936.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H236.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.97
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B733.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C247.97
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.02
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C448.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.13
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C131.39
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C534.03
Mouse Granule cells, donor1.CNhs12131.11713-123C334.39
Mouse Granule cells, donor2.CNhs12357.11731-123E344.96
Mouse Granule cells, donor3.CNhs12108.11636-122C746.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C649.81
Mouse Meningeal cells, donor3.CNhs12109.11639-122D164.03
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E743.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D259.68
Mouse Microglia, donor1.CNhs12629.11718-123C831.76
Mouse Microglia, donor2.CNhs12634.11736-123E840.73
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F541.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D944.59
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D244.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F245.91
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D655.15
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.58
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D438.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.20
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E535.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.91
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.13
Mouse Schwann, donor1.CNhs12507.11728-123D926.35
Mouse Schwann, donor2.CNhs12573.11746-123F924.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C820.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E347.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I838.16
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G227.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G325.78
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.59
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D79.95
adrenal gland, embryo E14.CNhs11038.406-44C529.67
adrenal gland, embryo E16.CNhs11004.1254-43D624.66
adrenal gland, embryo E17.CNhs11043.1263-45I122.37
adrenal gland, embryo E18.CNhs11026.1262-18F520.05
adrenal gland, neonate N00.CNhs11191.1311-23C113.99
adrenal gland, neonate N25.CNhs11223.1377-27I314.70
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H110.56
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F516.99
bone (os femoris), neonate N16.CNhs11225.1525-43A618.77
bone (os femoris), neonate N20.CNhs11195.1350-25C324.24
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I215.50
colon, adult.CNhs10468.36-18H711.75
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.18
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.44
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F131.79
cortex, adult.CNhs10473.12-14D519.29
cortex, neonate N30.CNhs11107.1392-42F228.64
diencephalon, adult.CNhs10482.20-12F220.78
diencephalon, neonate N30.CNhs11201.1388-42B224.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.78
epididymis, adult.CNhs10490.58-23B217.94
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C625.89
eyeball, embryo E14.CNhs10521.399-16E243.91
eyeball, embryo E15.CNhs10593.426-16C930.61
eyeball, embryo E17.CNhs11023.1261-18D426.37
eyeball, neonate N00.CNhs11207.633-15C622.72
eyeball, neonate N01.CNhs11140.1532-43E726.65
eyeball, neonate N02.CNhs11205.1551-44G826.61
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E227.38
forelimb, embryo E12.CNhs10600.359-14H222.13
forelimb, embryo E13.CNhs10589.384-1E230.62
forelimb, embryo E14.CNhs10577.413-26A829.37
forelimb, embryo E15.CNhs11007.437-20E731.70
forelimb, embryo E17.CNhs10598.1517-43C424.38
forelimb, embryo E18.CNhs11008.1520-43B524.28
gonad, embryo E13.CNhs11044.1564-45I624.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.17
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.02
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.87
heart, embryo E11.CNhs10586.331-24E920.09
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I926.65
heart, embryo E14.CNhs10597.403-26D426.04
heart, embryo E15.CNhs11017.431-16C821.45
heart, embryo E16.CNhs11021.457-17C628.69
heart, embryo E17.CNhs11025.479-18E522.56
heart, embryo E18.CNhs11030.1283-20G324.41
heart, neonate N00.CNhs11213.639-21E320.43
heart, neonate N03.CNhs11221.1349-25I221.72
heart, neonate N10.CNhs11118.749-24G118.39
heart, neonate N16.CNhs11209.782-15G116.21
heart, neonate N20.CNhs11127.821-26I617.69
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E823.55
hippocampus, neonate N00.CNhs11228.627-43G127.68
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I529.43
intestine, embryo E13.CNhs11010.381-16D527.64
intestine, embryo E15.CNhs10602.976-16D821.13
intestine, embryo E16.CNhs10585.463-22H416.34
intestine, embryo E17.CNhs10582.482-18D318.90
intestine, embryo E18.CNhs10526.1289-20F717.50
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E915.98
intestine, neonate N06.CNhs11102.688-20B818.60
intestine, neonate N07.CNhs11095.720-20F217.31
intestine, neonate N10.CNhs11098.755-23A517.74
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E312.97
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I935.66
kidney, embryo E15.CNhs10997.434-16F822.39
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I221.18
kidney, embryo E18.CNhs11001.1288-20C722.50
kidney, neonate N00.CNhs11214.646-21G713.89
kidney, neonate N10.CNhs11206.758-6D512.27
kidney, neonate N20.CNhs11113.832-19I114.32
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H114.56
liver, adult pregnant day01.CNhs10466.508-5B212.75
liver, embryo E12.CNhs10601.355-15F826.19
liver, embryo E13.CNhs10524.378-3H626.14
liver, embryo E14.CNhs10594.409-16E130.58
liver, embryo E15.CNhs10520.433-16D726.17
liver, embryo E16.CNhs10523.462-17F524.84
liver, embryo E17.CNhs10510.481-18A332.59
liver, embryo E18.CNhs10579.499-43G427.33
liver, neonate N00.CNhs11117.641-24F413.30
liver, neonate N03.CNhs11123.1345-25G219.49
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A318.94
liver, neonate N25.CNhs11198.1368-26H117.94
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B114.60
lung, embryo E12.CNhs10522.354-16G240.93
lung, embryo E14.CNhs10604.404-26F822.33
lung, embryo E15.CNhs11020.432-17C535.48
lung, embryo E16.CNhs10998.458-17B629.81
lung, embryo E17.CNhs10605.480-44A623.28
lung, embryo E18.CNhs10583.1287-20I619.76
lung, neonate N00.CNhs11224.640-42C615.22
lung, neonate N06.CNhs11212.683-20E513.71
lung, neonate N07.CNhs11111.715-19A315.06
lung, neonate N10.CNhs11219.750-23E615.15
lung, neonate N20.CNhs11109.822-18A420.32
lung, neonate N25.CNhs11119.1359-25C715.37
lung, neonate N30.CNhs11133.1394-42H219.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A129.37
mammary gland, adult lactating day02.CNhs10480.595-22B621.64
mammary gland, adult pregnant day19.CNhs10476.588-5H212.97
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A315.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E138.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.53
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D734.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.30
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.96
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.86
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I715.76
ovary, embryo E18.CNhs11040.505-44H732.76
ovary, neonate N00.CNhs11217.1299-22I419.71
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F432.05
pancreas, embryo E15.CNhs11042.1556-45F227.81
pancreas, embryo E16.CNhs11003.460-26E519.80
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G916.28
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B612.01
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E629.17
pituitary gland, embryo E13.CNhs11009.370-44C737.26
pituitary gland, embryo E14.CNhs11037.398-44A534.51
pituitary gland, embryo E15.CNhs10592.427-16B921.46
pituitary gland, embryo E16.CNhs11036.449-43F627.29
pituitary gland, embryo E17.CNhs11039.1265-44F526.49
pituitary gland, neonate N00.CNhs11190.1308-22E924.66
placenta, adult pregnant day10.CNhs10472.539-13I713.14
placenta, adult pregnant day17.CNhs10464.577-18G324.36
prostate, adult.CNhs10470.859-1F816.98
skin, adult.CNhs10492.30-1C319.13
skin, neonate N00.CNhs11124.650-25G417.60
skin, neonate N03.CNhs11215.662-22H316.77
skin, neonate N06.CNhs11097.693-20I518.98
skin, neonate N10.CNhs11108.762-6C420.35
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C913.72
spleen, adult.CNhs10465.25-2G228.19
spleen, embryo E16.CNhs11035.461-43C127.66
spleen, embryo E18.CNhs11011.1271-21F229.08
spleen, neonate N10.CNhs11116.752-24D139.18
spleen, neonate N20.CNhs11112.824-19H131.03
spleen, neonate N25.CNhs11099.1354-25G337.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.51
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E328.31
stomach, embryo E15.CNhs10603.1252-16G830.09
stomach, embryo E16.CNhs11022.459-17D425.60
stomach, embryo E17.CNhs11006.1035-18D525.30
stomach, embryo E18.CNhs10999.1286-20C624.89
stomach, neonate N03.CNhs11193.1340-24B821.44
stomach, neonate N07.CNhs11210.718-18A915.62
stomach, neonate N25.CNhs11104.1355-25E419.89
stomach, neonate N30.CNhs11134.1386-42I112.83
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G580.61
testis, embryo E13.CNhs11031.389-23F522.13
testis, embryo E15.CNhs11034.443-27C532.43
testis, embryo E16.CNhs11033.470-26G525.08
testis, embryo E17.CNhs11029.486-18I530.87
testis, embryo E18.CNhs11027.503-18G520.61
testis, neonate N00.CNhs11189.1300-22B721.71
testis, neonate N07.CNhs11222.726-26I420.31
testis, neonate N10.CNhs11204.763-44D922.02
testis, neonate N20.CNhs11110.839-18H378.51
testis, neonate N30.CNhs11130.1391-42E248.97
thymus, adult.CNhs10471.38-12B527.18
thymus, embryo E14.CNhs11041.402-44I435.07
thymus, embryo E15.CNhs11005.430-45I237.39
thymus, embryo E16.CNhs11002.456-26C532.74
thymus, embryo E17.CNhs10581.478-18C135.98
thymus, embryo E18.CNhs10595.1273-19G434.37
thymus, neonate N02.CNhs11181.1541-43F832.33
thymus, neonate N03.CNhs11137.2104-43C732.20
thymus, neonate N06.CNhs11197.681-26C428.88
thymus, neonate N07.CNhs11211.713-19D331.70
thymus, neonate N10.CNhs11194.748-24E427.63
thymus, neonate N20.CNhs11186.820-7A228.75
thymus, neonate N25.CNhs11125.1362-25G734.06
thymus, neonate N30.CNhs11132.1393-42G233.08
tongue, adult.CNhs10499.32-1B416.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.12
urinary bladder, adult.CNhs10481.879-12E415.84
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D518.44
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A638.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I833.63
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H225.10
whole body, embryo E14.5.CNhs10578.420-27D226.26
whole body, embryo E14.CNhs10519.395-14B135.01
whole body, embryo E16.CNhs10514.453-14F230.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.70
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.75
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.32
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.00
whole body, embryo E17.5.CNhs10513.490-9F921.22
whole body, embryo E17.CNhs10517.475-3I518.49
whole body, embryo E18.CNhs10516.493-3B324.56
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C618.94
whole body, neonate N06.CNhs10515.692-21D115.00
whole body, neonate N10.CNhs10518.761-6B419.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell9.40e-1343
ectodermal cell1.04e-1244
neurectodermal cell1.04e-1244
neuron3.94e-1033
neuronal stem cell3.94e-1033
neuroblast3.94e-1033
electrically signaling cell3.94e-1033
somatic stem cell9.32e-1091
multi fate stem cell9.32e-1091
electrically responsive cell2.52e-0939
electrically active cell2.52e-0939
CNS neuron (sensu Vertebrata)1.73e-0823
neuroblast (sensu Vertebrata)1.73e-0823
stem cell8.94e-0897
embryonic cell9.16e-0770

Uber anatomy
Ontology termp-valuen
nervous system4.14e-1275
central nervous system4.69e-1273
gray matter3.73e-1034
regional part of forebrain1.15e-0839
forebrain1.15e-0839
future forebrain1.15e-0839
brain grey matter1.54e-0829
regional part of telencephalon1.54e-0829
telencephalon1.54e-0829
ectoderm-derived structure1.60e-0895
ectoderm1.60e-0895
presumptive ectoderm1.60e-0895
neurectoderm1.61e-0864
neural plate1.61e-0864
presumptive neural plate1.61e-0864
regional part of nervous system2.60e-0854
neural tube3.66e-0852
neural rod3.66e-0852
future spinal cord3.66e-0852
neural keel3.66e-0852
anterior neural tube4.19e-0840
pre-chordal neural plate1.53e-0749
regional part of brain2.91e-0746
brain7.65e-0747
future brain7.65e-0747
cerebral cortex8.02e-0721
cerebral hemisphere8.02e-0721
pallium8.02e-0721







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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