FFCP PHASE1:Hg19::chr21:27253554..27253578,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.03e-10;22!UBERON:0003528;2.19e-09;34!UBERON:0002020;2.19e-09;34!UBERON:0002791;3.73e-09;32!UBERON:0001950;1.40e-08;20!UBERON:0001869;2.10e-08;32!UBERON:0000956;2.17e-08;25!UBERON:0000203;2.17e-08;25!UBERON:0002780;1.24e-07;41!UBERON:0001890;1.24e-07;41!UBERON:0001893;2.53e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002619;3.03e-10;22!UBERON:0003528;2.19e-09;34!UBERON:0002020;2.19e-09;34!UBERON:0002791;3.73e-09;32!UBERON:0001950;1.40e-08;20!UBERON:0001869;2.10e-08;32!UBERON:0000956;2.17e-08;25!UBERON:0000203;2.17e-08;25!UBERON:0002780;1.24e-07;41!UBERON:0001890;1.24e-07;41!UBERON:0001893;2.53e-07;34 | ||
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| ||
|short_description=p15@APP | |short_description=p15@APP | ||
}} | }} |
Revision as of 21:52, 17 November 2012
Short description: | p15@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_S41242, S41243_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 7.21e-14 | 240 |
neural tube | 4.01e-12 | 56 |
neural rod | 4.01e-12 | 56 |
future spinal cord | 4.01e-12 | 56 |
neural keel | 4.01e-12 | 56 |
brain grey matter | 1.00e-11 | 34 |
gray matter | 1.00e-11 | 34 |
regional part of cerebral cortex | 8.35e-11 | 22 |
tube | 1.46e-10 | 192 |
regional part of nervous system | 1.74e-10 | 53 |
regional part of brain | 1.74e-10 | 53 |
regional part of telencephalon | 2.84e-10 | 32 |
regional part of forebrain | 3.84e-10 | 41 |
forebrain | 3.84e-10 | 41 |
anterior neural tube | 3.84e-10 | 41 |
future forebrain | 3.84e-10 | 41 |
central nervous system | 8.57e-10 | 81 |
cerebral hemisphere | 1.92e-09 | 32 |
epithelium | 2.77e-09 | 306 |
telencephalon | 2.90e-09 | 34 |
neural plate | 4.07e-09 | 82 |
presumptive neural plate | 4.07e-09 | 82 |
neocortex | 4.35e-09 | 20 |
cell layer | 6.27e-09 | 309 |
cerebral cortex | 7.29e-09 | 25 |
pallium | 7.29e-09 | 25 |
nervous system | 7.81e-09 | 89 |
brain | 1.31e-08 | 68 |
future brain | 1.31e-08 | 68 |
ecto-epithelium | 2.39e-08 | 104 |
structure with developmental contribution from neural crest | 3.28e-08 | 132 |
neurectoderm | 3.76e-08 | 86 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.