FFCP PHASE1:Hg19::chr4:3344434..3344441,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002553!1.77e-08!1 | |ontology_enrichment_celltype=CL:0002553!1.77e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.39e-66;1!CL:0000082;4.91e-15;19!CL:0000062;1.21e-08;9 | |ontology_enrichment_celltype_v019=CL:0002553;2.39e-66;1!CL:0000082;4.91e-15;19!CL:0000062;1.21e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.39e-66,1;CL:0000082,4.91e-15,19;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.96e-10;29!UBERON:0001041;5.96e-10;30!CL:0000335;2.63e-07;11 | |ontology_enrichment_development_v019=UBERON:0008947;2.96e-10;29!UBERON:0001041;5.96e-10;30!CL:0000335;2.63e-07;11 | ||
|ontology_enrichment_disease=DOID:0050615!1.28e-10!16;DOID:3347!1.91e-08!1;DOID:0050619!4.71e-08!1;DOID:1357!4.71e-08!1;DOID:1324!1.40e-07!15 | |ontology_enrichment_disease=DOID:0050615!1.28e-10!16;DOID:3347!1.91e-08!1;DOID:0050619!4.71e-08!1;DOID:1357!4.71e-08!1;DOID:1324!1.40e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:3347;4.66e-66;1!DOID:1324;1.04e-18;15!DOID:5409;7.35e-18;4!DOID:0050615;1.27e-17;16!DOID:201;2.74e-12;6!DOID:0060100;2.74e-12;6!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |ontology_enrichment_disease_v019=DOID:3347;4.66e-66;1!DOID:1324;1.04e-18;15!DOID:5409;7.35e-18;4!DOID:0050615;1.27e-17;16!DOID:201;2.74e-12;6!DOID:0060100;2.74e-12;6!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3347,4.66e-66,1;DOID:1324,1.04e-18,15;DOID:5409,7.35e-18,4;DOID:0050615,1.27e-17,16;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002619!5.51e-27!22;UBERON:0000956!1.11e-23!25;UBERON:0000203!1.11e-23!25;UBERON:0001950!7.42e-19!20;UBERON:0001869!2.63e-18!32;UBERON:0002791!1.02e-17!33;UBERON:0002020!3.65e-17!34;UBERON:0003528!3.65e-17!34;UBERON:0001893!3.65e-17!34;UBERON:0002780!4.26e-17!41;UBERON:0001890!4.26e-17!41;UBERON:0006240!4.26e-17!41;UBERON:0003080!1.18e-16!42;UBERON:0001954!1.04e-14!2;UBERON:0003022!1.04e-14!2;UBERON:0002421!1.04e-14!2;UBERON:0002600!1.04e-14!2;UBERON:0001049!3.42e-14!57;UBERON:0005068!3.42e-14!57;UBERON:0006241!3.42e-14!57;UBERON:0007135!3.42e-14!57;UBERON:0002616!1.20e-13!59;UBERON:0000349!5.34e-13!5;UBERON:0002346!1.39e-11!90;UBERON:0000955!3.43e-11!69;UBERON:0006238!3.43e-11!69;UBERON:0000025!5.02e-11!194;UBERON:0003056!5.92e-11!61;UBERON:0001017!7.42e-11!82;UBERON:0003075!2.13e-10!86;UBERON:0007284!2.13e-10!86;UBERON:0005743!2.98e-10!86;UBERON:0000073!4.47e-09!94;UBERON:0001016!4.47e-09!94;UBERON:0007023!1.53e-08!115;UBERON:0004111!4.39e-08!241;UBERON:0001301!4.40e-08!1;UBERON:0001871!4.68e-08!7;UBERON:0001764!4.71e-08!1;UBERON:0001825!4.71e-08!1;UBERON:0002022!6.19e-08!1;UBERON:0002902!9.94e-08!1;UBERON:0009899!9.94e-08!1;UBERON:0002581!1.14e-07!1 | |ontology_enrichment_uberon=UBERON:0002619!5.51e-27!22;UBERON:0000956!1.11e-23!25;UBERON:0000203!1.11e-23!25;UBERON:0001950!7.42e-19!20;UBERON:0001869!2.63e-18!32;UBERON:0002791!1.02e-17!33;UBERON:0002020!3.65e-17!34;UBERON:0003528!3.65e-17!34;UBERON:0001893!3.65e-17!34;UBERON:0002780!4.26e-17!41;UBERON:0001890!4.26e-17!41;UBERON:0006240!4.26e-17!41;UBERON:0003080!1.18e-16!42;UBERON:0001954!1.04e-14!2;UBERON:0003022!1.04e-14!2;UBERON:0002421!1.04e-14!2;UBERON:0002600!1.04e-14!2;UBERON:0001049!3.42e-14!57;UBERON:0005068!3.42e-14!57;UBERON:0006241!3.42e-14!57;UBERON:0007135!3.42e-14!57;UBERON:0002616!1.20e-13!59;UBERON:0000349!5.34e-13!5;UBERON:0002346!1.39e-11!90;UBERON:0000955!3.43e-11!69;UBERON:0006238!3.43e-11!69;UBERON:0000025!5.02e-11!194;UBERON:0003056!5.92e-11!61;UBERON:0001017!7.42e-11!82;UBERON:0003075!2.13e-10!86;UBERON:0007284!2.13e-10!86;UBERON:0005743!2.98e-10!86;UBERON:0000073!4.47e-09!94;UBERON:0001016!4.47e-09!94;UBERON:0007023!1.53e-08!115;UBERON:0004111!4.39e-08!241;UBERON:0001301!4.40e-08!1;UBERON:0001871!4.68e-08!7;UBERON:0001764!4.71e-08!1;UBERON:0001825!4.71e-08!1;UBERON:0002022!6.19e-08!1;UBERON:0002902!9.94e-08!1;UBERON:0009899!9.94e-08!1;UBERON:0002581!1.14e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;4.91e-15;19!UBERON:0000115;4.91e-15;19!UBERON:0002048;3.77e-13;22!UBERON:0004807;3.77e-13;22!UBERON:0000117;3.77e-13;22!UBERON:0000171;3.77e-13;22!UBERON:0000170;3.77e-13;22!UBERON:0000072;2.68e-09;37!UBERON:0005181;2.68e-09;35!UBERON:0005911;1.20e-08;36!UBERON:0005178;5.42e-08;34!UBERON:0002224;5.42e-08;34!UBERON:0000065;4.33e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0004802;4.91e-15;19!UBERON:0000115;4.91e-15;19!UBERON:0002048;3.77e-13;22!UBERON:0004807;3.77e-13;22!UBERON:0000117;3.77e-13;22!UBERON:0000171;3.77e-13;22!UBERON:0000170;3.77e-13;22!UBERON:0000072;2.68e-09;37!UBERON:0005181;2.68e-09;35!UBERON:0005911;1.20e-08;36!UBERON:0005178;5.42e-08;34!UBERON:0002224;5.42e-08;34!UBERON:0000065;4.33e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,4.91e-15,19;UBERON:0000115,4.91e-15,19;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0004807,1.40e-10,28;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0000072,9.72e-07,47;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p@chr4:3344434..3344441,+ | |short_description=p@chr4:3344434..3344441,+ | ||
}} | }} |
Revision as of 09:53, 18 November 2012
Short description: | p@chr4:3344434..3344441, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:3344434..3344441, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.39e-66 | 1 |
epithelial cell of lung | 4.91e-15 | 19 |
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 4.91e-15 | 19 |
lung epithelium | 4.91e-15 | 19 |
lung | 3.77e-13 | 22 |
respiratory tube | 3.77e-13 | 22 |
respiration organ | 3.77e-13 | 22 |
pair of lungs | 3.77e-13 | 22 |
lung primordium | 3.77e-13 | 22 |
lung bud | 3.77e-13 | 22 |
respiratory system epithelium | 1.40e-10 | 28 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
epithelial bud | 2.82e-08 | 37 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
segment of respiratory tract | 9.72e-07 | 47 |
epithelial fold | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 4.66e-66 | 1 |
lung cancer | 1.04e-18 | 15 |
lung small cell carcinoma | 7.35e-18 | 4 |
respiratory system cancer | 1.27e-17 | 16 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.