FFCP PHASE1:Hg19::chrX:2747022..2747035,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000148!1.13e-13!10;CL:0000541!1.13e-13!10;CL:0000147!2.55e-11!14;CL:0000325!1.20e-10!39;CL:0002322!3.31e-09!5;CL:0000710!1.11e-08!20;CL:0000075!6.54e-07!27 | |ontology_enrichment_celltype=CL:0000148!1.13e-13!10;CL:0000541!1.13e-13!10;CL:0000147!2.55e-11!14;CL:0000325!1.20e-10!39;CL:0002322!3.31e-09!5;CL:0000710!1.11e-08!20;CL:0000075!6.54e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.17e-11;13!CL:0000333;7.37e-08;5 | |ontology_enrichment_celltype_v019=CL:0000136;2.17e-11;13!CL:0000333;7.37e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.85e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.33e-12;3!UBERON:0003057;1.33e-12;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.33e-12;3!UBERON:0003057;1.33e-12;3 | ||
|ontology_enrichment_disease=DOID:3095!1.03e-07!22;DOID:2994!1.03e-07!22 | |ontology_enrichment_disease=DOID:3095!1.03e-07!22;DOID:2994!1.03e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.88e-08;10 | |ontology_enrichment_disease_v019=DOID:171;1.88e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.86e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.69e-21!90;UBERON:0001049!9.14e-20!57;UBERON:0005068!9.14e-20!57;UBERON:0006241!9.14e-20!57;UBERON:0007135!9.14e-20!57;UBERON:0005743!1.78e-19!86;UBERON:0003076!2.85e-19!15;UBERON:0003057!2.85e-19!15;UBERON:0000073!3.29e-19!94;UBERON:0001016!3.29e-19!94;UBERON:0007023!7.41e-19!115;UBERON:0003075!1.16e-18!86;UBERON:0007284!1.16e-18!86;UBERON:0001017!1.98e-18!82;UBERON:0002616!1.67e-15!59;UBERON:0002298!3.45e-15!8;UBERON:0004733!3.63e-14!12;UBERON:0002028!3.63e-14!12;UBERON:0007277!3.63e-14!12;UBERON:0000955!4.87e-14!69;UBERON:0006238!4.87e-14!69;UBERON:0000924!1.65e-13!173;UBERON:0006601!1.65e-13!173;UBERON:0004732!7.05e-13!13;UBERON:0004121!1.00e-11!169;UBERON:0000033!6.20e-11!123;UBERON:0000153!1.10e-10!129;UBERON:0007811!1.10e-10!129;UBERON:0002680!2.66e-09!9;UBERON:0001895!2.66e-09!9;UBERON:0010092!2.66e-09!9;UBERON:0002308!3.19e-09!9;UBERON:0000125!3.19e-09!9;UBERON:0003056!2.11e-08!61;UBERON:0003080!2.28e-07!42;UBERON:0002240!5.61e-07!3;UBERON:0006331!7.33e-07!3;UBERON:0001896!7.47e-07!3;UBERON:0005290!7.47e-07!3;UBERON:0010096!7.47e-07!3 | |ontology_enrichment_uberon=UBERON:0002346!2.69e-21!90;UBERON:0001049!9.14e-20!57;UBERON:0005068!9.14e-20!57;UBERON:0006241!9.14e-20!57;UBERON:0007135!9.14e-20!57;UBERON:0005743!1.78e-19!86;UBERON:0003076!2.85e-19!15;UBERON:0003057!2.85e-19!15;UBERON:0000073!3.29e-19!94;UBERON:0001016!3.29e-19!94;UBERON:0007023!7.41e-19!115;UBERON:0003075!1.16e-18!86;UBERON:0007284!1.16e-18!86;UBERON:0001017!1.98e-18!82;UBERON:0002616!1.67e-15!59;UBERON:0002298!3.45e-15!8;UBERON:0004733!3.63e-14!12;UBERON:0002028!3.63e-14!12;UBERON:0007277!3.63e-14!12;UBERON:0000955!4.87e-14!69;UBERON:0006238!4.87e-14!69;UBERON:0000924!1.65e-13!173;UBERON:0006601!1.65e-13!173;UBERON:0004732!7.05e-13!13;UBERON:0004121!1.00e-11!169;UBERON:0000033!6.20e-11!123;UBERON:0000153!1.10e-10!129;UBERON:0007811!1.10e-10!129;UBERON:0002680!2.66e-09!9;UBERON:0001895!2.66e-09!9;UBERON:0010092!2.66e-09!9;UBERON:0002308!3.19e-09!9;UBERON:0000125!3.19e-09!9;UBERON:0003056!2.11e-08!61;UBERON:0003080!2.28e-07!42;UBERON:0002240!5.61e-07!3;UBERON:0006331!7.33e-07!3;UBERON:0001896!7.47e-07!3;UBERON:0005290!7.47e-07!3;UBERON:0010096!7.47e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;6.62e-23;6!UBERON:0002148;5.33e-18;2!UBERON:0006331;5.33e-18;2!UBERON:0009662;5.33e-18;2!UBERON:0002240;1.33e-12;3!UBERON:0005174;1.33e-12;3!UBERON:0001137;1.33e-12;3!UBERON:0000988;2.52e-12;3!UBERON:0001896;2.52e-12;3!UBERON:0005290;2.52e-12;3!UBERON:0004733;1.39e-11;12!UBERON:0002028;1.39e-11;12!UBERON:0004732;1.04e-10;13!UBERON:0002038;7.22e-10;1!UBERON:0009661;7.22e-10;1!UBERON:0002950;7.22e-10;1!UBERON:0001891;7.22e-10;1!UBERON:0000125;4.32e-09;9!UBERON:0002308;4.32e-09;9!UBERON:0000013;7.37e-08;5!UBERON:0002410;7.37e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002298;6.62e-23;6!UBERON:0002148;5.33e-18;2!UBERON:0006331;5.33e-18;2!UBERON:0009662;5.33e-18;2!UBERON:0002240;1.33e-12;3!UBERON:0005174;1.33e-12;3!UBERON:0001137;1.33e-12;3!UBERON:0000988;2.52e-12;3!UBERON:0001896;2.52e-12;3!UBERON:0005290;2.52e-12;3!UBERON:0004733;1.39e-11;12!UBERON:0002028;1.39e-11;12!UBERON:0004732;1.04e-10;13!UBERON:0002038;7.22e-10;1!UBERON:0009661;7.22e-10;1!UBERON:0002950;7.22e-10;1!UBERON:0001891;7.22e-10;1!UBERON:0000125;4.32e-09;9!UBERON:0002308;4.32e-09;9!UBERON:0000013;7.37e-08;5!UBERON:0002410;7.37e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,4.70e-23,6;UBERON:0003076,2.68e-20,15;UBERON:0003057,2.68e-20,15;UBERON:0002148,6.35e-18,2;UBERON:0006331,6.35e-18,2;UBERON:0009662,6.35e-18,2;UBERON:0002240,9.95e-13,3;UBERON:0005174,9.95e-13,3;UBERON:0001137,9.95e-13,3;UBERON:0001896,1.59e-12,3;UBERON:0005290,1.59e-12,3;UBERON:0010096,1.59e-12,3;UBERON:0000988,2.83e-12,3;UBERON:0004733,1.18e-11,12;UBERON:0002028,1.18e-11,12;UBERON:0007277,1.18e-11,12;UBERON:0004732,8.95e-11,13;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1;UBERON:0000125,5.34e-09,9;UBERON:0002308,5.34e-09,9;UBERON:0001049,1.24e-08,56;UBERON:0005068,1.24e-08,56;UBERON:0006241,1.24e-08,56;UBERON:0007135,1.24e-08,56;UBERON:0000013,7.25e-08,5;UBERON:0002410,7.25e-08,5;UBERON:0001016,8.16e-08,89;UBERON:0002346,9.40e-07,86 | |||
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| ||
|short_description=p4@GYG2 | |short_description=p4@GYG2 | ||
}} | }} |
Revision as of 11:25, 20 November 2012
Short description: | p4@GYG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GYG2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 30bp_to_ENST00000522988_5end |
EntrezGene: | GYG2 |
HGNC: | 4700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.85e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
brainstem | 4.70e-23 | 6 |
posterior neural tube | 2.68e-20 | 15 |
chordal neural plate | 2.68e-20 | 15 |
locus ceruleus | 6.35e-18 | 2 |
brainstem nucleus | 6.35e-18 | 2 |
hindbrain nucleus | 6.35e-18 | 2 |
spinal cord | 9.95e-13 | 3 |
dorsal region element | 9.95e-13 | 3 |
dorsum | 9.95e-13 | 3 |
medulla oblongata | 1.59e-12 | 3 |
myelencephalon | 1.59e-12 | 3 |
future myelencephalon | 1.59e-12 | 3 |
pons | 2.83e-12 | 3 |
segmental subdivision of hindbrain | 1.18e-11 | 12 |
hindbrain | 1.18e-11 | 12 |
presumptive hindbrain | 1.18e-11 | 12 |
segmental subdivision of nervous system | 8.95e-11 | 13 |
substantia nigra | 1.17e-09 | 1 |
midbrain nucleus | 1.17e-09 | 1 |
regional part of midbrain | 1.17e-09 | 1 |
midbrain | 1.17e-09 | 1 |
presumptive midbrain | 1.17e-09 | 1 |
midbrain neural tube | 1.17e-09 | 1 |
neural nucleus | 5.34e-09 | 9 |
nucleus of brain | 5.34e-09 | 9 |
neural tube | 1.24e-08 | 56 |
neural rod | 1.24e-08 | 56 |
future spinal cord | 1.24e-08 | 56 |
neural keel | 1.24e-08 | 56 |
sympathetic nervous system | 7.25e-08 | 5 |
autonomic nervous system | 7.25e-08 | 5 |
nervous system | 8.16e-08 | 89 |
neurectoderm | 9.40e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.86e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.