FFCP PHASE1:Hg19::chr1:101360374..101360419,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.66e-25!180;CL:0000057!4.57e-13!75;CL:0002620!9.59e-08!23;CL:0000393!1.37e-07!60;CL:0000211!1.37e-07!60 | |ontology_enrichment_celltype=CL:0000055!5.66e-25!180;CL:0000057!4.57e-13!75;CL:0002620!9.59e-08!23;CL:0000393!1.37e-07!60;CL:0000211!1.37e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.07e-08;23 | |ontology_enrichment_celltype_v019=CL:0002620;9.07e-08;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.59e-13,76;CL:0002620,9.23e-08,23;CL:0000393,1.05e-07,61;CL:0000211,1.05e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!9.67e-07!14 | |ontology_enrichment_disease=DOID:2394!9.67e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.68e-17!94;UBERON:0001016!3.68e-17!94;UBERON:0001017!2.96e-16!82;UBERON:0005743!3.14e-16!86;UBERON:0002616!1.26e-13!59;UBERON:0000955!1.35e-13!69;UBERON:0006238!1.35e-13!69;UBERON:0001049!2.38e-12!57;UBERON:0005068!2.38e-12!57;UBERON:0006241!2.38e-12!57;UBERON:0007135!2.38e-12!57;UBERON:0000033!2.47e-12!123;UBERON:0000924!3.77e-12!173;UBERON:0006601!3.77e-12!173;UBERON:0000153!6.78e-12!129;UBERON:0007811!6.78e-12!129;UBERON:0004121!8.78e-12!169;UBERON:0002780!1.64e-11!41;UBERON:0001890!1.64e-11!41;UBERON:0006240!1.64e-11!41;UBERON:0002346!2.81e-11!90;UBERON:0003080!4.03e-11!42;UBERON:0003075!5.81e-11!86;UBERON:0007284!5.81e-11!86;UBERON:0000475!7.97e-11!365;UBERON:0003056!2.15e-10!61;UBERON:0002020!9.71e-10!34;UBERON:0003528!9.71e-10!34;UBERON:0001893!1.10e-09!34;UBERON:0001869!1.57e-09!32;UBERON:0002791!3.43e-09!33;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0000914!1.65e-07!83;UBERON:0002329!1.65e-07!83;UBERON:0003077!1.65e-07!83;UBERON:0003059!1.65e-07!83;UBERON:0007282!1.65e-07!83;UBERON:0009618!1.65e-07!83;UBERON:0007285!1.65e-07!83;UBERON:0001950!2.43e-07!20;UBERON:0002619!3.57e-07!22 | |ontology_enrichment_uberon=UBERON:0000073!3.68e-17!94;UBERON:0001016!3.68e-17!94;UBERON:0001017!2.96e-16!82;UBERON:0005743!3.14e-16!86;UBERON:0002616!1.26e-13!59;UBERON:0000955!1.35e-13!69;UBERON:0006238!1.35e-13!69;UBERON:0001049!2.38e-12!57;UBERON:0005068!2.38e-12!57;UBERON:0006241!2.38e-12!57;UBERON:0007135!2.38e-12!57;UBERON:0000033!2.47e-12!123;UBERON:0000924!3.77e-12!173;UBERON:0006601!3.77e-12!173;UBERON:0000153!6.78e-12!129;UBERON:0007811!6.78e-12!129;UBERON:0004121!8.78e-12!169;UBERON:0002780!1.64e-11!41;UBERON:0001890!1.64e-11!41;UBERON:0006240!1.64e-11!41;UBERON:0002346!2.81e-11!90;UBERON:0003080!4.03e-11!42;UBERON:0003075!5.81e-11!86;UBERON:0007284!5.81e-11!86;UBERON:0000475!7.97e-11!365;UBERON:0003056!2.15e-10!61;UBERON:0002020!9.71e-10!34;UBERON:0003528!9.71e-10!34;UBERON:0001893!1.10e-09!34;UBERON:0001869!1.57e-09!32;UBERON:0002791!3.43e-09!33;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0000914!1.65e-07!83;UBERON:0002329!1.65e-07!83;UBERON:0003077!1.65e-07!83;UBERON:0003059!1.65e-07!83;UBERON:0007282!1.65e-07!83;UBERON:0009618!1.65e-07!83;UBERON:0007285!1.65e-07!83;UBERON:0001950!2.43e-07!20;UBERON:0002619!3.57e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.06e-08;32!UBERON:0001893;1.19e-08;34!UBERON:0003528;1.34e-08;34!UBERON:0002020;1.34e-08;34!UBERON:0002791;1.84e-08;32!UBERON:0002780;2.74e-08;41!UBERON:0001890;2.74e-08;41!UBERON:0000073;9.33e-08;53!UBERON:0002616;9.33e-08;53!UBERON:0000956;1.24e-07;25!UBERON:0000203;1.24e-07;25!UBERON:0001950;2.34e-07;20!UBERON:0002619;3.46e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.06e-08;32!UBERON:0001893;1.19e-08;34!UBERON:0003528;1.34e-08;34!UBERON:0002020;1.34e-08;34!UBERON:0002791;1.84e-08;32!UBERON:0002780;2.74e-08;41!UBERON:0001890;2.74e-08;41!UBERON:0000073;9.33e-08;53!UBERON:0002616;9.33e-08;53!UBERON:0000956;1.24e-07;25!UBERON:0000203;1.24e-07;25!UBERON:0001950;2.34e-07;20!UBERON:0002619;3.46e-07;22 | ||
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| ||
|short_description=p1@EXTL2 | |short_description=p1@EXTL2 | ||
}} | }} |
Revision as of 03:49, 21 November 2012
Short description: | p1@EXTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EXTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000535414, NM_001033025, NM_001439, uc001dtk.1, uc001dtl.1, uc001dtm.1, uc010ouk.1_5end |
EntrezGene: | EXTL2 |
HGNC: | 3516 |
UniProt: | F5GZK1Q05DH5Q49A43Q8N8F1Q9UBQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.59e-13 | 76 |
skin fibroblast | 9.23e-08 | 23 |
electrically responsive cell | 1.05e-07 | 61 |
electrically active cell | 1.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.64e-17 | 89 |
central nervous system | 1.31e-16 | 81 |
brain | 6.09e-14 | 68 |
future brain | 6.09e-14 | 68 |
structure with developmental contribution from neural crest | 2.87e-13 | 132 |
ectoderm-derived structure | 3.93e-13 | 171 |
ectoderm | 3.93e-13 | 171 |
presumptive ectoderm | 3.93e-13 | 171 |
neural tube | 1.03e-12 | 56 |
neural rod | 1.03e-12 | 56 |
future spinal cord | 1.03e-12 | 56 |
neural keel | 1.03e-12 | 56 |
regional part of nervous system | 2.45e-12 | 53 |
regional part of brain | 2.45e-12 | 53 |
neurectoderm | 3.28e-12 | 86 |
neural plate | 6.63e-12 | 82 |
presumptive neural plate | 6.63e-12 | 82 |
regional part of forebrain | 1.54e-11 | 41 |
forebrain | 1.54e-11 | 41 |
anterior neural tube | 1.54e-11 | 41 |
future forebrain | 1.54e-11 | 41 |
pre-chordal neural plate | 1.73e-10 | 61 |
brain grey matter | 9.23e-10 | 34 |
gray matter | 9.23e-10 | 34 |
telencephalon | 1.05e-09 | 34 |
cerebral hemisphere | 1.49e-09 | 32 |
regional part of telencephalon | 2.80e-09 | 32 |
ecto-epithelium | 4.42e-08 | 104 |
cerebral cortex | 1.25e-07 | 25 |
pallium | 1.25e-07 | 25 |
neocortex | 2.34e-07 | 20 |
regional part of cerebral cortex | 3.44e-07 | 22 |
organ system subdivision | 4.59e-07 | 223 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.