FFCP PHASE1:Hg19::chr12:107487338..107487358,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1407|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2384|TSSclassifier=S|UniProt=|association_with_transcript=-47bp_to_ENST00000550633_5end|description=CAGE_peak_2_at_CRY1_5end|id=chr12:107487338..107487358,-|ontology_enrichment_celltype=CL:0000791!6.65e-11!18;CL:0000789!6.65e-11!18;CL:0002420!6.65e-11!18;CL:0002419!6.65e-11!18;CL:0000790!6.65e-11!18;CL:0000084!1.90e-10!25;CL:0000827!1.90e-10!25;CL:0000037!1.81e-08!172;CL:0000566!1.81e-08!172;CL:0000738!2.17e-08!140;CL:0000625!1.10e-07!11;CL:0000988!3.41e-07!182|ontology_enrichment_celltype_v019=CL:0000791;2.10e-11;18!CL:0000789;2.10e-11;18!CL:0002419;2.10e-11;18!CL:0000084;1.38e-10;25!CL:0000625;8.90e-08;11|ontology_enrichment_celltype_v019_2=CL:0000791,6.17e-11,18;CL:0000789,6.17e-11,18;CL:0002420,6.17e-11,18;CL:0002419,6.17e-11,18;CL:0000790,6.17e-11,18;CL:0000084,2.50e-10,25;CL:0000827,2.50e-10,25;CL:0000037,1.31e-08,168;CL:0000738,1.63e-08,136;CL:0000625,1.04e-07,11;CL:0000988,1.54e-07,177;CL:0002032,7.96e-07,161;CL:0000837,7.96e-07,161|ontology_enrichment_development_v019=CL:0000790;2.10e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.94e-19!115;UBERON:0002616!1.02e-08!59;UBERON:0001049!1.40e-08!57;UBERON:0005068!1.40e-08!57;UBERON:0006241!1.40e-08!57;UBERON:0007135!1.40e-08!57;UBERON:0001017!1.59e-08!82;UBERON:0000073!3.36e-08!94;UBERON:0001016!3.36e-08!94;UBERON:0005743!7.95e-08!86;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0001893!1.45e-07!34;UBERON:0003080!1.55e-07!42;UBERON:0002791!1.78e-07!33;UBERON:0002780!2.27e-07!41;UBERON:0001890!2.27e-07!41;UBERON:0006240!2.27e-07!41;UBERON:0000955!3.57e-07!69;UBERON:0006238!3.57e-07!69;UBERON:0001869!7.69e-07!32|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.38e-19,114;UBERON:0001016,1.07e-08,89;UBERON:0000073,1.32e-08,53;UBERON:0002616,1.32e-08,53;UBERON:0001049,1.89e-08,56;UBERON:0005068,1.89e-08,56;UBERON:0006241,1.89e-08,56;UBERON:0007135,1.89e-08,56;UBERON:0001017,2.42e-08,81;UBERON:0003528,1.19e-07,34;UBERON:0002020,1.19e-07,34;UBERON:0001893,1.38e-07,34;UBERON:0002780,2.11e-07,41;UBERON:0001890,2.11e-07,41;UBERON:0003080,2.11e-07,41;UBERON:0006240,2.11e-07,41;UBERON:0002791,3.63e-07,32;UBERON:0000955,5.43e-07,68;UBERON:0006238,5.43e-07,68;UBERON:0001869,7.36e-07,32|phase1_expression=1.63510541343501,1.71280419112787,3.38290569830331,2.00146596706261,2.23480547213644,0.872338524100369,2.53299878168311,1.26343974685366,0.783556884599516,0.982935746006035,0.697801167972428,0.873765488520689,1.05506791291381,0.495065411840187,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,1.96993692922861,1.22400414746552,2.19418305034661,2.86235987131057,2.18999080116615,3.76627918784408,1.83392173795083,1.88831355734875,1.49550484495991,2.75354993794233,5.75744097145819,3.09632246632152,0,0.6024118375565,1.47901604066715,0,0,4.40400659002271,8.30993112797816,8.02177789880567,5.4252717678963,1.79132379391939,3.56283032620878,1.03030227053675,2.32637182047304,3.40088349319928,3.63876091781724,2.78914844286822,4.52284676824008,4.02618282163635,4.60307827715441,3.84241059793651,4.25668013799453,3.10271112662957,2.5819387343353,0,3.57660445130949,3.82068610080984,2.02251136000576,4.89734227793444,4.49300637906531,5.11469700639233,1.9791078011203,2.39356389145958,4.68847225585964,2.90209238628584,3.40431134814684,4.9825779919646,3.76872997885115,4.17186334736161,3.9093992046921,3.63239701580021,2.20966581592539,3.48108626184973,1.90129757680748,1.70083439972035,3.56419697364239,1.68492946719743,0.901061357049038,0.803627933485401,1.71007646244749,1.9891667719909,2.37463399894024,1.75996244461323,2.73069305631066,3.55803701545422,3.41384178053206,1.20118796110804,1.72425731986345,2.64417949113945,0.954053754535364,7.96898156753228,5.28513470433845,9.55683070313072,6.60856642895129,11.7706798226123,4.47752944117631,19.0808477010418,18.4715058492107,18.2985334109563,6.68745981562712,15.3183465317787,11.3627473376336,9.74133642039557,3.45372416344038,10.0166008541445,11.2982286237647,12.1861738694257,7.04502258491213,6.89314542067355,3.78207180588455,3.86890024900188,3.18783394308558,14.0872235003957,10.4340922954988,12.5442628565972,3.17266159553185,13.7959377696692,10.6524508099615,7.59059076058509,7.32700452945422,7.1619179924206,8.55406840003537,8.88393202558859,5.88738411310325,9.99445812418767,4.97232229292435,9.03240796613151,16.1285394579786,16.3138519427939,15.2065624076939,2.43806866313962,0.670700859703636,1.53435074212236,0.722878304769133,1.50401373190767,1.88300474649071,1.5905718941022,3.40644409211845,2.55244006342983,3.54767035940102,2.3715392137144,5.30465255765736,0.364295288292542,0.741568885568859,0.97364218096405,1.0447784237956,1.46253756570752,7.3932093534656,4.0039643754609,4.82894751728434,0.39752481473341,0.860234595106124,1.73570250803797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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1407 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2384 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000550633_5end | |||
|description=CAGE_peak_2_at_CRY1_5end | |||
|id=chr12:107487338..107487358,- | |||
|ontology_enrichment_celltype=CL:0000791!6.65e-11!18;CL:0000789!6.65e-11!18;CL:0002420!6.65e-11!18;CL:0002419!6.65e-11!18;CL:0000790!6.65e-11!18;CL:0000084!1.90e-10!25;CL:0000827!1.90e-10!25;CL:0000037!1.81e-08!172;CL:0000566!1.81e-08!172;CL:0000738!2.17e-08!140;CL:0000625!1.10e-07!11;CL:0000988!3.41e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.10e-11;18!CL:0000789;2.10e-11;18!CL:0002419;2.10e-11;18!CL:0000084;1.38e-10;25!CL:0000625;8.90e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.17e-11,18;CL:0000789,6.17e-11,18;CL:0002420,6.17e-11,18;CL:0002419,6.17e-11,18;CL:0000790,6.17e-11,18;CL:0000084,2.50e-10,25;CL:0000827,2.50e-10,25;CL:0000037,1.31e-08,168;CL:0000738,1.63e-08,136;CL:0000625,1.04e-07,11;CL:0000988,1.54e-07,177;CL:0002032,7.96e-07,161;CL:0000837,7.96e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-19!115;UBERON:0002616!1.02e-08!59;UBERON:0001049!1.40e-08!57;UBERON:0005068!1.40e-08!57;UBERON:0006241!1.40e-08!57;UBERON:0007135!1.40e-08!57;UBERON:0001017!1.59e-08!82;UBERON:0000073!3.36e-08!94;UBERON:0001016!3.36e-08!94;UBERON:0005743!7.95e-08!86;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0001893!1.45e-07!34;UBERON:0003080!1.55e-07!42;UBERON:0002791!1.78e-07!33;UBERON:0002780!2.27e-07!41;UBERON:0001890!2.27e-07!41;UBERON:0006240!2.27e-07!41;UBERON:0000955!3.57e-07!69;UBERON:0006238!3.57e-07!69;UBERON:0001869!7.69e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.38e-19,114;UBERON:0001016,1.07e-08,89;UBERON:0000073,1.32e-08,53;UBERON:0002616,1.32e-08,53;UBERON:0001049,1.89e-08,56;UBERON:0005068,1.89e-08,56;UBERON:0006241,1.89e-08,56;UBERON:0007135,1.89e-08,56;UBERON:0001017,2.42e-08,81;UBERON:0003528,1.19e-07,34;UBERON:0002020,1.19e-07,34;UBERON:0001893,1.38e-07,34;UBERON:0002780,2.11e-07,41;UBERON:0001890,2.11e-07,41;UBERON:0003080,2.11e-07,41;UBERON:0006240,2.11e-07,41;UBERON:0002791,3.63e-07,32;UBERON:0000955,5.43e-07,68;UBERON:0006238,5.43e-07,68;UBERON:0001869,7.36e-07,32 | |||
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| |||
|short_description=p2@CRY1 | |||
}} |
Revision as of 20:40, 10 September 2013
Short description: | p2@CRY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CRY1_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000550633_5end |
EntrezGene: | CRY1 |
HGNC: | 2384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.17e-11 | 18 |
alpha-beta T cell | 6.17e-11 | 18 |
immature T cell | 6.17e-11 | 18 |
mature T cell | 6.17e-11 | 18 |
immature alpha-beta T cell | 6.17e-11 | 18 |
T cell | 2.50e-10 | 25 |
pro-T cell | 2.50e-10 | 25 |
hematopoietic stem cell | 1.31e-08 | 168 |
leukocyte | 1.63e-08 | 136 |
CD8-positive, alpha-beta T cell | 1.04e-07 | 11 |
hematopoietic cell | 1.54e-07 | 177 |
hematopoietic oligopotent progenitor cell | 7.96e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.96e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.38e-19 | 114 |
nervous system | 1.07e-08 | 89 |
regional part of nervous system | 1.32e-08 | 53 |
regional part of brain | 1.32e-08 | 53 |
neural tube | 1.89e-08 | 56 |
neural rod | 1.89e-08 | 56 |
future spinal cord | 1.89e-08 | 56 |
neural keel | 1.89e-08 | 56 |
central nervous system | 2.42e-08 | 81 |
brain grey matter | 1.19e-07 | 34 |
gray matter | 1.19e-07 | 34 |
telencephalon | 1.38e-07 | 34 |
regional part of forebrain | 2.11e-07 | 41 |
forebrain | 2.11e-07 | 41 |
anterior neural tube | 2.11e-07 | 41 |
future forebrain | 2.11e-07 | 41 |
regional part of telencephalon | 3.63e-07 | 32 |
brain | 5.43e-07 | 68 |
future brain | 5.43e-07 | 68 |
cerebral hemisphere | 7.36e-07 | 32 |
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