FFCP PHASE1:Hg19::chr15:58438475..58438486,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr15:58438475..58438486,+|id=chr15:58438475..58438486,+|ontology_enrichment_celltype=CL:0002057!8.76e-65!42;CL:0000860!3.41e-60!45;CL:0000766!2.59e-48!76;CL:0002194!3.21e-45!63;CL:0000576!3.21e-45!63;CL:0000040!3.21e-45!63;CL:0000559!3.21e-45!63;CL:0002009!1.01e-43!65;CL:0000839!2.44e-40!70;CL:0000557!1.01e-39!71;CL:0000763!1.95e-31!112;CL:0000049!1.95e-31!112;CL:0000738!1.87e-26!140;CL:0002087!2.43e-24!119;CL:0002031!4.87e-21!124;CL:0000037!1.16e-20!172;CL:0000566!1.16e-20!172;CL:0002032!6.96e-20!165;CL:0000837!6.96e-20!165;CL:0000988!2.89e-19!182;CL:0002393!4.08e-12!9;CL:0002397!4.08e-12!9;CL:0000775!1.32e-09!3;CL:0000134!3.13e-08!358;CL:0002320!5.65e-08!365;CL:0000094!9.70e-08!8;CL:0000219!4.55e-07!390|ontology_enrichment_celltype_v019=CL:0002393;1.45e-30;6!CL:0002397;1.45e-30;6!CL:0000860;7.56e-21;33!CL:0002057;7.56e-21;33!CL:0000576;6.62e-17;48!CL:0000473;8.77e-16;39!CL:0000234;8.77e-16;39!CL:0000766;4.57e-14;69!CL:0002087;1.15e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,9.92e-38,42;CL:0002057,9.92e-38,42;CL:0000473,5.43e-33,48;CL:0000234,5.43e-33,48;CL:0002194,2.39e-26,59;CL:0000576,2.39e-26,59;CL:0000040,2.39e-26,59;CL:0000559,2.39e-26,59;CL:0002009,1.72e-25,61;CL:0000839,1.44e-23,66;CL:0000557,3.23e-23,67;CL:0000766,1.31e-21,72;CL:0002393,1.24e-20,9;CL:0002397,1.24e-20,9;CL:0000763,2.35e-14,108;CL:0000049,2.35e-14,108;CL:0002087,1.83e-13,115;CL:0002031,6.87e-13,120;CL:0000738,2.48e-11,136;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177|ontology_enrichment_development_v019=CL:0002057;7.01e-23;42!UBERON:0005425;8.53e-21;1!UBERON:0003056;8.02e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.90e-35!80;UBERON:0001474!3.96e-32!86;UBERON:0004765!1.85e-29!101;UBERON:0001434!1.85e-29!101;UBERON:0002390!4.24e-29!102;UBERON:0003061!4.24e-29!102;UBERON:0002193!3.98e-26!112;UBERON:0002405!5.20e-23!115;UBERON:0002204!4.11e-16!167;UBERON:0003081!1.97e-11!216;UBERON:0000941!4.66e-08!1;UBERON:0004904!4.66e-08!1;UBERON:0002464!4.66e-08!1;UBERON:0001021!4.66e-08!1;UBERON:0001785!4.66e-08!1;UBERON:0002384!1.27e-07!375|ontology_enrichment_uberon_v019=UBERON:0000941;8.53e-21;1!UBERON:0001785;8.53e-21;1!UBERON:0002464;8.53e-21;1!UBERON:0004904;8.53e-21;1!UBERON:0001021;8.53e-21;1!UBERON:0003714;4.30e-11;2!UBERON:0005162;4.30e-11;2!UBERON:0000122;4.30e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0002371,1.81e-20,76;UBERON:0001474,5.75e-19,82;UBERON:0004765,2.87e-17,90;UBERON:0002405,1.05e-16,93;UBERON:0002390,7.63e-16,98;UBERON:0003061,7.63e-16,98;UBERON:0001434,1.60e-15,100;UBERON:0002193,2.35e-14,108;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0002204,3.78e-09,167;UBERON:0003081,1.95e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,3.87796785972314,4.41197784434312,2.38711957787437,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0,3.44745680736619,3.87290810150296,0,0,0,0,2.44867113896722,0.962787081228281,2.55734850319616,0.659702600373432,0,0,0.580418477257168,2.8369261234557,1.24564449799115,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr15:58438475..58438486,+ | |||
|id=chr15:58438475..58438486,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.76e-65!42;CL:0000860!3.41e-60!45;CL:0000766!2.59e-48!76;CL:0002194!3.21e-45!63;CL:0000576!3.21e-45!63;CL:0000040!3.21e-45!63;CL:0000559!3.21e-45!63;CL:0002009!1.01e-43!65;CL:0000839!2.44e-40!70;CL:0000557!1.01e-39!71;CL:0000763!1.95e-31!112;CL:0000049!1.95e-31!112;CL:0000738!1.87e-26!140;CL:0002087!2.43e-24!119;CL:0002031!4.87e-21!124;CL:0000037!1.16e-20!172;CL:0000566!1.16e-20!172;CL:0002032!6.96e-20!165;CL:0000837!6.96e-20!165;CL:0000988!2.89e-19!182;CL:0002393!4.08e-12!9;CL:0002397!4.08e-12!9;CL:0000775!1.32e-09!3;CL:0000134!3.13e-08!358;CL:0002320!5.65e-08!365;CL:0000094!9.70e-08!8;CL:0000219!4.55e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.45e-30;6!CL:0002397;1.45e-30;6!CL:0000860;7.56e-21;33!CL:0002057;7.56e-21;33!CL:0000576;6.62e-17;48!CL:0000473;8.77e-16;39!CL:0000234;8.77e-16;39!CL:0000766;4.57e-14;69!CL:0002087;1.15e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.92e-38,42;CL:0002057,9.92e-38,42;CL:0000473,5.43e-33,48;CL:0000234,5.43e-33,48;CL:0002194,2.39e-26,59;CL:0000576,2.39e-26,59;CL:0000040,2.39e-26,59;CL:0000559,2.39e-26,59;CL:0002009,1.72e-25,61;CL:0000839,1.44e-23,66;CL:0000557,3.23e-23,67;CL:0000766,1.31e-21,72;CL:0002393,1.24e-20,9;CL:0002397,1.24e-20,9;CL:0000763,2.35e-14,108;CL:0000049,2.35e-14,108;CL:0002087,1.83e-13,115;CL:0002031,6.87e-13,120;CL:0000738,2.48e-11,136;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.01e-23;42!UBERON:0005425;8.53e-21;1!UBERON:0003056;8.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.90e-35!80;UBERON:0001474!3.96e-32!86;UBERON:0004765!1.85e-29!101;UBERON:0001434!1.85e-29!101;UBERON:0002390!4.24e-29!102;UBERON:0003061!4.24e-29!102;UBERON:0002193!3.98e-26!112;UBERON:0002405!5.20e-23!115;UBERON:0002204!4.11e-16!167;UBERON:0003081!1.97e-11!216;UBERON:0000941!4.66e-08!1;UBERON:0004904!4.66e-08!1;UBERON:0002464!4.66e-08!1;UBERON:0001021!4.66e-08!1;UBERON:0001785!4.66e-08!1;UBERON:0002384!1.27e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.53e-21;1!UBERON:0001785;8.53e-21;1!UBERON:0002464;8.53e-21;1!UBERON:0004904;8.53e-21;1!UBERON:0001021;8.53e-21;1!UBERON:0003714;4.30e-11;2!UBERON:0005162;4.30e-11;2!UBERON:0000122;4.30e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0002371,1.81e-20,76;UBERON:0001474,5.75e-19,82;UBERON:0004765,2.87e-17,90;UBERON:0002405,1.05e-16,93;UBERON:0002390,7.63e-16,98;UBERON:0003061,7.63e-16,98;UBERON:0001434,1.60e-15,100;UBERON:0002193,2.35e-14,108;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0002204,3.78e-09,167;UBERON:0003081,1.95e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,3.87796785972314,4.41197784434312,2.38711957787437,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0,3.44745680736619,3.87290810150296,0,0,0,0,2.44867113896722,0.962787081228281,2.55734850319616,0.659702600373432,0,0,0.580418477257168,2.8369261234557,1.24564449799115,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:58438475..58438486,+ | |||
}} |
Revision as of 07:35, 11 September 2013
Short description: | p@chr15:58438475..58438486, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:58438475..58438486, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.92e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-38 | 42 |
defensive cell | 5.43e-33 | 48 |
phagocyte | 5.43e-33 | 48 |
monopoietic cell | 2.39e-26 | 59 |
monocyte | 2.39e-26 | 59 |
monoblast | 2.39e-26 | 59 |
promonocyte | 2.39e-26 | 59 |
macrophage dendritic cell progenitor | 1.72e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.44e-23 | 66 |
granulocyte monocyte progenitor cell | 3.23e-23 | 67 |
myeloid leukocyte | 1.31e-21 | 72 |
intermediate monocyte | 1.24e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.24e-20 | 9 |
myeloid cell | 2.35e-14 | 108 |
common myeloid progenitor | 2.35e-14 | 108 |
nongranular leukocyte | 1.83e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.87e-13 | 120 |
leukocyte | 2.48e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.72e-21 | 1 |
cranial nerve | 7.72e-21 | 1 |
nerve trunk | 7.72e-21 | 1 |
nerve connecting eye with brain | 7.72e-21 | 1 |
nerve | 7.72e-21 | 1 |
retinal neural layer | 7.72e-21 | 1 |
presumptive neural retina | 7.72e-21 | 1 |
bone marrow | 1.81e-20 | 76 |
bone element | 5.75e-19 | 82 |
skeletal element | 2.87e-17 | 90 |
immune system | 1.05e-16 | 93 |
hematopoietic system | 7.63e-16 | 98 |
blood island | 7.63e-16 | 98 |
skeletal system | 1.60e-15 | 100 |
hemolymphoid system | 2.35e-14 | 108 |
neural tissue | 4.09e-11 | 2 |
multi cell component structure | 4.09e-11 | 2 |
neuron projection bundle | 4.09e-11 | 2 |
musculoskeletal system | 3.78e-09 | 167 |
lateral plate mesoderm | 1.95e-07 | 203 |
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