FFCP PHASE1:Hg19::chr18:47376197..47376227,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002ldz.2_5end | |||
|coexpression_cluster_id=C2462 | |||
|description=CAGE_peak_2_at_MYO5B_5end | |||
|id=chr18:47376197..47376227,- | |||
|ontology_enrichment_celltype=CL:0000066!5.91e-60!254;CL:0002076!4.77e-16!43;CL:0000223!2.61e-15!59;CL:0000076!6.33e-13!62;CL:0000220!1.99e-12!246;CL:0002321!2.69e-12!248;CL:0000082!4.23e-09!19;CL:0000077!1.19e-07!19;CL:0002368!2.38e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.90e-14;42!CL:0000082;7.26e-12;19!CL:0002368;3.38e-10;13!CL:1000507;3.95e-09;10!CL:1000494;3.95e-09;10!CL:0000077;5.77e-09;19!CL:1000497;1.89e-08;17!CL:0002518;1.89e-08;17!CL:0000066;5.92e-08;253!CL:0002202;8.29e-08;9!CL:0002632;8.29e-08;9!CL:0002251;2.14e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.44e-63,253;CL:0002076,5.76e-19,42;CL:0000223,3.14e-16,58;CL:0000076,6.03e-12,63;CL:0000082,7.96e-12,19;CL:0002368,5.66e-10,13;CL:1000507,3.87e-09,10;CL:1000494,3.87e-09,10;CL:0000077,4.37e-09,19;CL:1000497,1.77e-08,17;CL:0002518,1.77e-08,17;CL:0002202,9.83e-08,9;CL:0002632,9.83e-08,9;CL:0002251,2.37e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.39e-16;29!CL:0000223;1.10e-08;58!UBERON:0006595;3.89e-08;86!UBERON:0001041;5.80e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.15e-36!106;DOID:0050687!9.04e-31!143;DOID:162!1.48e-20!235;DOID:14566!3.61e-20!239;DOID:299!8.58e-10!25;DOID:0050615!3.02e-07!16;DOID:1324!4.56e-07!15;DOID:1749!6.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;2.05e-13;25!DOID:305;5.86e-11;106!DOID:1749;1.45e-09;14!DOID:1324;5.51e-09;15!DOID:0050615;3.33e-08;16!DOID:0050687;3.61e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.72e-44,106;DOID:0050687,1.73e-36,143;DOID:162,3.45e-24,235;DOID:14566,5.16e-23,239;DOID:299,1.98e-13,25;DOID:1749,1.25e-09,14;DOID:1324,6.56e-09,15;DOID:0050615,3.90e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.70e-22!169;UBERON:0000925!6.70e-22!169;UBERON:0006595!6.70e-22!169;UBERON:0001007!6.82e-19!155;UBERON:0001555!6.82e-19!155;UBERON:0007026!6.82e-19!155;UBERON:0004921!3.17e-17!129;UBERON:0004185!3.17e-17!129;UBERON:0008947!4.27e-15!38;UBERON:0003258!4.27e-15!38;UBERON:0000065!5.14e-15!53;UBERON:0000077!4.10e-14!130;UBERON:0000072!8.49e-14!46;UBERON:0000063!3.50e-13!97;UBERON:0001004!1.01e-12!72;UBERON:0005911!3.51e-12!82;UBERON:0001041!6.97e-12!98;UBERON:0000481!1.60e-11!347;UBERON:0005177!2.51e-11!107;UBERON:0001048!3.35e-11!168;UBERON:0000466!5.13e-10!126;UBERON:0003104!6.28e-10!238;UBERON:0009142!6.28e-10!238;UBERON:0000064!6.31e-10!219;UBERON:0005153!1.03e-09!37;UBERON:0000464!1.37e-09!104;UBERON:0000922!1.37e-09!612;UBERON:0000467!1.37e-09!625;UBERON:0002050!1.53e-09!605;UBERON:0005423!1.53e-09!605;UBERON:0000480!1.88e-09!626;UBERON:0000923!2.69e-09!604;UBERON:0005291!2.69e-09!604;UBERON:0006598!2.69e-09!604;UBERON:0002532!2.69e-09!604;UBERON:0004802!4.23e-09!19;UBERON:0000115!4.23e-09!19;UBERON:0000062!5.46e-09!511;UBERON:0000468!1.06e-08!659;UBERON:0005178!1.43e-08!34;UBERON:0002224!1.43e-08!34;UBERON:0006554!1.44e-08!44;UBERON:0002048!1.66e-08!22;UBERON:0000117!1.66e-08!22;UBERON:0000171!1.66e-08!22;UBERON:0000170!1.66e-08!22;UBERON:0005597!1.66e-08!22;UBERON:0000118!1.66e-08!22;UBERON:0001737!2.81e-08!9;UBERON:0009569!3.00e-08!113;UBERON:0001008!3.95e-08!45;UBERON:0004807!3.98e-08!28;UBERON:0005181!4.72e-08!35;UBERON:0005157!2.48e-07!51;UBERON:0002113!5.40e-07!27;UBERON:0003918!5.40e-07!27;UBERON:0005095!5.40e-07!27;UBERON:0007687!5.40e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;7.73e-17;37!UBERON:0000065;7.52e-15;44!UBERON:0004807;6.15e-14;22!UBERON:0004802;7.26e-12;19!UBERON:0000115;7.26e-12;19!UBERON:0001737;2.67e-11;9!UBERON:0001557;2.67e-11;9!UBERON:0006554;6.69e-11;30!UBERON:0001008;6.69e-11;30!UBERON:0005911;2.34e-10;36!UBERON:0002113;3.53e-10;24!UBERON:0011143;3.53e-10;24!UBERON:0005409;1.16e-09;22!UBERON:0002048;1.44e-09;22!UBERON:0000117;1.44e-09;22!UBERON:0000171;1.44e-09;22!UBERON:0000170;1.44e-09;22!UBERON:0004211;3.95e-09;10!UBERON:0009773;3.95e-09;10!UBERON:0001231;3.95e-09;10!UBERON:0004810;3.95e-09;10!UBERON:0001004;1.13e-08;65!UBERON:0005178;1.81e-08;34!UBERON:0002224;1.81e-08;34!UBERON:0000489;2.07e-08;29!UBERON:0005181;2.73e-08;35!UBERON:0000160;2.03e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-21,160;UBERON:0000925,6.04e-21,160;UBERON:0006595,6.04e-21,160;UBERON:0008947,1.89e-19,38;UBERON:0003258,1.89e-19,38;UBERON:0001007,1.12e-18,145;UBERON:0001555,1.12e-18,145;UBERON:0007026,1.12e-18,145;UBERON:0000065,1.38e-16,54;UBERON:0004921,2.48e-16,118;UBERON:0000072,4.57e-16,47;UBERON:0001004,9.49e-14,74;UBERON:0005177,1.31e-13,101;UBERON:0004802,7.96e-12,19;UBERON:0000115,7.96e-12,19;UBERON:0001041,1.37e-11,87;UBERON:0001737,2.56e-11,9;UBERON:0005911,3.73e-10,82;UBERON:0005153,1.26e-09,37;UBERON:0004807,1.32e-09,28;UBERON:0002048,1.56e-09,22;UBERON:0000117,1.56e-09,22;UBERON:0000171,1.56e-09,22;UBERON:0000170,1.56e-09,22;UBERON:0005597,1.56e-09,22;UBERON:0000118,1.56e-09,22;UBERON:0005178,1.67e-09,34;UBERON:0002224,1.67e-09,34;UBERON:0009569,1.84e-09,112;UBERON:0001048,3.53e-09,160;UBERON:0004810,3.87e-09,10;UBERON:0005181,4.74e-09,35;UBERON:0002113,4.75e-09,26;UBERON:0003918,4.75e-09,26;UBERON:0011143,4.75e-09,26;UBERON:0005095,4.75e-09,26;UBERON:0007687,4.75e-09,26;UBERON:0006554,3.66e-08,47;UBERON:0005409,5.38e-08,25;UBERON:0001008,7.59e-08,48;UBERON:0000489,1.40e-07,31;UBERON:0005157,1.42e-07,47;UBERON:0000160,1.73e-07,17 | |||
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| |||
|short_description=p2@MYO5B | |||
}} |
Revision as of 17:39, 11 September 2013
Short description: | p2@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MYO5B_5end |
Coexpression cluster: | C2462_cervical_small_colon_clear_embryonic_renal_mucinous |
Association with transcript: | 0bp_to_uc002ldz.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.44e-63 | 253 |
endo-epithelial cell | 5.76e-19 | 42 |
endodermal cell | 3.14e-16 | 58 |
squamous epithelial cell | 6.03e-12 | 63 |
epithelial cell of lung | 7.96e-12 | 19 |
respiratory epithelial cell | 5.66e-10 | 13 |
kidney tubule cell | 3.87e-09 | 10 |
nephron tubule epithelial cell | 3.87e-09 | 10 |
mesothelial cell | 4.37e-09 | 19 |
kidney cell | 1.77e-08 | 17 |
kidney epithelial cell | 1.77e-08 | 17 |
epithelial cell of tracheobronchial tree | 9.83e-08 | 9 |
epithelial cell of lower respiratory tract | 9.83e-08 | 9 |
epithelial cell of alimentary canal | 2.37e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.72e-44 | 106 |
cell type cancer | 1.73e-36 | 143 |
cancer | 3.45e-24 | 235 |
disease of cellular proliferation | 5.16e-23 | 239 |
adenocarcinoma | 1.98e-13 | 25 |
squamous cell carcinoma | 1.25e-09 | 14 |
lung cancer | 6.56e-09 | 15 |
respiratory system cancer | 3.90e-08 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.