FFCP PHASE1:Hg19::chr22:29108004..29108032,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11200|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16627|TSSclassifier=S|UniProt=|association_with_transcript=-61bp_to_ENST00000456369_5end|description=CAGE_peak_5_at_CHEK2_5end|id=chr22:29108004..29108032,-|ontology_enrichment_celltype=CL:0000057!2.23e-21!75;CL:0000055!4.96e-15!180;CL:0002620!2.15e-11!23;CL:0002334!1.36e-07!12|ontology_enrichment_celltype_v019=CL:0000153;1.64e-10;9!CL:0000447;1.64e-10;9!CL:0000499;5.09e-09;28!CL:0000214;8.64e-09;3!CL:0000135;2.23e-08;3!CL:0000388;2.23e-08;3!CL:0000511;3.83e-07;1!CL:0002625;3.83e-07;1!CL:0000216;3.83e-07;1|ontology_enrichment_celltype_v019_2=CL:0000153,1.63e-10,9;CL:0000447,1.63e-10,9;CL:0000499,5.51e-09,28;CL:0000214,8.67e-09,3;CL:0000135,2.64e-08,3;CL:0000388,2.64e-08,3;CL:0000511,3.95e-07,1;CL:0002625,3.95e-07,1;CL:0000216,3.95e-07,1;CL:0002550,5.89e-07,1;CL:0002581,8.27e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.09e-10;5!DOID:450;2.09e-10;5!DOID:66;2.09e-10;5!DOID:423;2.09e-10;5!DOID:0080000;2.09e-10;5!DOID:11722;2.09e-10;5|ontology_enrichment_disease_v019_2=DOID:17,2.10e-10,5;DOID:450,2.10e-10,5;DOID:66,2.10e-10,5;DOID:423,2.10e-10,5;DOID:0080000,2.10e-10,5;DOID:11722,2.10e-10,5|ontology_enrichment_uberon=UBERON:0003102!2.48e-11!95;UBERON:0000914!1.15e-08!83;UBERON:0002329!1.15e-08!83;UBERON:0003077!1.15e-08!83;UBERON:0003059!1.15e-08!83;UBERON:0007282!1.15e-08!83;UBERON:0009618!1.15e-08!83;UBERON:0007285!1.15e-08!83;UBERON:0001737!1.59e-08!9;UBERON:0003104!2.97e-08!238;UBERON:0009142!2.97e-08!238;UBERON:0000475!1.57e-07!365;UBERON:0004290!9.97e-07!70|ontology_enrichment_uberon_v019=UBERON:0004089;1.12e-11;2!UBERON:0004457;1.83e-10;9!UBERON:0000042;1.83e-10;9!UBERON:0006915;8.64e-09;3!UBERON:0007616;8.64e-09;3!UBERON:0002217;8.64e-09;3!UBERON:0002018;8.64e-09;3!UBERON:0007846;2.23e-08;3!UBERON:0000043;2.23e-08;3!UBERON:0007845;2.23e-08;3!UBERON:0003104;2.06e-07;7!UBERON:0009142;2.06e-07;7!UBERON:0001136;3.83e-07;1!UBERON:0001343;3.83e-07;1!UBERON:0004910;3.83e-07;1!UBERON:0004813;3.83e-07;1!UBERON:0001301;4.96e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004089,5.53e-12,2;UBERON:0006915,8.67e-09,3;UBERON:0007616,8.67e-09,3;UBERON:0002217,8.67e-09,3;UBERON:0002018,8.67e-09,3;UBERON:0007846,2.64e-08,3;UBERON:0000043,2.64e-08,3;UBERON:0007845,2.64e-08,3;UBERON:0004457,7.80e-08,12;UBERON:0000042,7.80e-08,12;UBERON:0001136,3.95e-07,1;UBERON:0001343,3.95e-07,1;UBERON:0004910,3.95e-07,1;UBERON:0005154,3.95e-07,1;UBERON:0005295,3.95e-07,1;UBERON:0004813,3.95e-07,1;UBERON:0005297,3.95e-07,1;UBERON:0005294,3.95e-07,1;UBERON:0010141,3.95e-07,1;UBERON:0005891,3.95e-07,1;UBERON:0001301,4.69e-07,1;UBERON:0001831,7.39e-07,1;UBERON:0001567,7.39e-07,1;UBERON:0008801,7.39e-07,1;UBERON:0005705,8.75e-07,1;UBERON:0008193,8.75e-07,1;UBERON:0010912,8.75e-07,1;UBERON:0002514,8.75e-07,1;UBERON:0003457,8.75e-07,1;UBERON:0008907,8.75e-07,1;UBERON:0008001,8.75e-07,1;UBERON:0007213,8.75e-07,1;UBERON:0009891,8.75e-07,1;UBERON:0007914,8.75e-07,1;UBERON:0009292,8.75e-07,1;UBERON:0003099,8.75e-07,1;UBERON:0007375,8.75e-07,1;UBERON:0003323,8.75e-07,1;UBERON:0010258,8.75e-07,1;UBERON:0007842,8.75e-07,1;UBERON:0009494,8.75e-07,1;UBERON:0010042,8.75e-07,1;UBERON:0010045,8.75e-07,1;UBERON:0010259,8.75e-07,1;UBERON:0010359,8.75e-07,1;UBERON:0009526,8.75e-07,1;UBERON:0002397,8.75e-07,1;UBERON:0003113,8.75e-07,1;UBERON:0003277,8.75e-07,1;UBERON:0001709,8.75e-07,1;UBERON:0004066,8.75e-07,1;UBERON:0002244,8.75e-07,1;UBERON:0005620,8.75e-07,1;UBERON:0004362,8.75e-07,1;UBERON:0010364,8.75e-07,1;UBERON:0010046,8.75e-07,1;UBERON:0005868,8.75e-07,1;UBERON:0007238,8.75e-07,1;UBERON:0004288,8.75e-07,1;UBERON:0004068,8.75e-07,1;UBERON:0010334,8.75e-07,1;UBERON:0003852,8.75e-07,1;UBERON:0010253,8.75e-07,1|phase1_expression=1.81678379270557,0.642301571672949,0.281908808191942,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,3.00802746381534,2.89693037921647,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0.302714855289863,1.15235184896,1.87457145467037,0.936480230490962,0.570471821544449,0.298897361103602,0.704606991862589,0.323745888736263,0,0.408308342509787,0.368502951935304,0.826606249406124,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,1.06778694409284,2.11931901159562,0.300091096084402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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16627 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-61bp_to_ENST00000456369_5end | |||
|description=CAGE_peak_5_at_CHEK2_5end | |||
|id=chr22:29108004..29108032,- | |||
|ontology_enrichment_celltype=CL:0000057!2.23e-21!75;CL:0000055!4.96e-15!180;CL:0002620!2.15e-11!23;CL:0002334!1.36e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.64e-10;9!CL:0000447;1.64e-10;9!CL:0000499;5.09e-09;28!CL:0000214;8.64e-09;3!CL:0000135;2.23e-08;3!CL:0000388;2.23e-08;3!CL:0000511;3.83e-07;1!CL:0002625;3.83e-07;1!CL:0000216;3.83e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.63e-10,9;CL:0000447,1.63e-10,9;CL:0000499,5.51e-09,28;CL:0000214,8.67e-09,3;CL:0000135,2.64e-08,3;CL:0000388,2.64e-08,3;CL:0000511,3.95e-07,1;CL:0002625,3.95e-07,1;CL:0000216,3.95e-07,1;CL:0002550,5.89e-07,1;CL:0002581,8.27e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.09e-10;5!DOID:450;2.09e-10;5!DOID:66;2.09e-10;5!DOID:423;2.09e-10;5!DOID:0080000;2.09e-10;5!DOID:11722;2.09e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.10e-10,5;DOID:450,2.10e-10,5;DOID:66,2.10e-10,5;DOID:423,2.10e-10,5;DOID:0080000,2.10e-10,5;DOID:11722,2.10e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.48e-11!95;UBERON:0000914!1.15e-08!83;UBERON:0002329!1.15e-08!83;UBERON:0003077!1.15e-08!83;UBERON:0003059!1.15e-08!83;UBERON:0007282!1.15e-08!83;UBERON:0009618!1.15e-08!83;UBERON:0007285!1.15e-08!83;UBERON:0001737!1.59e-08!9;UBERON:0003104!2.97e-08!238;UBERON:0009142!2.97e-08!238;UBERON:0000475!1.57e-07!365;UBERON:0004290!9.97e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004089;1.12e-11;2!UBERON:0004457;1.83e-10;9!UBERON:0000042;1.83e-10;9!UBERON:0006915;8.64e-09;3!UBERON:0007616;8.64e-09;3!UBERON:0002217;8.64e-09;3!UBERON:0002018;8.64e-09;3!UBERON:0007846;2.23e-08;3!UBERON:0000043;2.23e-08;3!UBERON:0007845;2.23e-08;3!UBERON:0003104;2.06e-07;7!UBERON:0009142;2.06e-07;7!UBERON:0001136;3.83e-07;1!UBERON:0001343;3.83e-07;1!UBERON:0004910;3.83e-07;1!UBERON:0004813;3.83e-07;1!UBERON:0001301;4.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004089,5.53e-12,2;UBERON:0006915,8.67e-09,3;UBERON:0007616,8.67e-09,3;UBERON:0002217,8.67e-09,3;UBERON:0002018,8.67e-09,3;UBERON:0007846,2.64e-08,3;UBERON:0000043,2.64e-08,3;UBERON:0007845,2.64e-08,3;UBERON:0004457,7.80e-08,12;UBERON:0000042,7.80e-08,12;UBERON:0001136,3.95e-07,1;UBERON:0001343,3.95e-07,1;UBERON:0004910,3.95e-07,1;UBERON:0005154,3.95e-07,1;UBERON:0005295,3.95e-07,1;UBERON:0004813,3.95e-07,1;UBERON:0005297,3.95e-07,1;UBERON:0005294,3.95e-07,1;UBERON:0010141,3.95e-07,1;UBERON:0005891,3.95e-07,1;UBERON:0001301,4.69e-07,1;UBERON:0001831,7.39e-07,1;UBERON:0001567,7.39e-07,1;UBERON:0008801,7.39e-07,1;UBERON:0005705,8.75e-07,1;UBERON:0008193,8.75e-07,1;UBERON:0010912,8.75e-07,1;UBERON:0002514,8.75e-07,1;UBERON:0003457,8.75e-07,1;UBERON:0008907,8.75e-07,1;UBERON:0008001,8.75e-07,1;UBERON:0007213,8.75e-07,1;UBERON:0009891,8.75e-07,1;UBERON:0007914,8.75e-07,1;UBERON:0009292,8.75e-07,1;UBERON:0003099,8.75e-07,1;UBERON:0007375,8.75e-07,1;UBERON:0003323,8.75e-07,1;UBERON:0010258,8.75e-07,1;UBERON:0007842,8.75e-07,1;UBERON:0009494,8.75e-07,1;UBERON:0010042,8.75e-07,1;UBERON:0010045,8.75e-07,1;UBERON:0010259,8.75e-07,1;UBERON:0010359,8.75e-07,1;UBERON:0009526,8.75e-07,1;UBERON:0002397,8.75e-07,1;UBERON:0003113,8.75e-07,1;UBERON:0003277,8.75e-07,1;UBERON:0001709,8.75e-07,1;UBERON:0004066,8.75e-07,1;UBERON:0002244,8.75e-07,1;UBERON:0005620,8.75e-07,1;UBERON:0004362,8.75e-07,1;UBERON:0010364,8.75e-07,1;UBERON:0010046,8.75e-07,1;UBERON:0005868,8.75e-07,1;UBERON:0007238,8.75e-07,1;UBERON:0004288,8.75e-07,1;UBERON:0004068,8.75e-07,1;UBERON:0010334,8.75e-07,1;UBERON:0003852,8.75e-07,1;UBERON:0010253,8.75e-07,1 | |||
|phase1_expression=1.81678379270557,0.642301571672949,0.281908808191942,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,3.00802746381534,2.89693037921647,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0.302714855289863,1.15235184896,1.87457145467037,0.936480230490962,0.570471821544449,0.298897361103602,0.704606991862589,0.323745888736263,0,0.408308342509787,0.368502951935304,0.826606249406124,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,1.06778694409284,2.11931901159562,0.300091096084402,1.64884046781502,0.515281080091258,0.558350568994769,0,0.389748020644795,0.252433774244115,0.736399189138395,1.2931684545505,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0,0.709840800239063,0.337169380156203,0.723033089650446,1.32352767278873,0.435758888184812,0.474541238222193,0.808987848960987,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0.542621605391443,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,1.10391690523754,0.234282829985426,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.841980283299221,0.128139149255701,2.04682899626681,0,1.48418066444991,0,0.532685175939381,0.574890092096664,1.03850885836724,0.929683027679674,0,0,0,0.68888668898764,0.182091168006717,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.290012154876366,0,0,0,0.751941714077915,0.435050081742686,0.255679882248303,0,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.539617372749944,1.37268514868027,0.235624804691373,0,1.58510321173008,0.842516912477962,0,0.243713489631284,0,0.545999645631943,0.989838023675989,0,0,0,1.31535265576129,0,0,0.202910376962704,0,0,0,0.294747123039363,0,0,4.85547561184627,4.28083360847872,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,2.62090002363045,0,0.290268993867255,0.438535902517113,0.164230914106418,0,0,0.677942222341597,0.137041924646751,0,0,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0.393915911536118,0.0824158583811665,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,7.88864293064517,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.895528817321244,0.233713309847224,1.10961172300523,0.378806010550178,0.251567901752575,0,0,0.302461847526478,0.466311601748341,0.295710299979268,0.477890301491107,0,0.310525913752519,0,0,0,0,0.380805212168795,0,0.545545977607678,0.107410557042488,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0,0.91064876540519,0.266107110487916,0,0.171488009437418,0,0,3.30942754475111,0,0.39246546425257,0,0,0,0,0,0.714765441766563,0,0,0,0,0.207216164163037,0.3414369541879,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,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| |||
|short_description=p5@CHEK2 | |||
}} |
Revision as of 11:21, 12 September 2013
Short description: | p5@CHEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CHEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000456369_5end |
EntrezGene: | CHEK2 |
HGNC: | 16627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.63e-10 | 9 |
carbohydrate secreting cell | 1.63e-10 | 9 |
stromal cell | 5.51e-09 | 28 |
synovial cell | 8.67e-09 | 3 |
fibrocyte | 2.64e-08 | 3 |
tendon cell | 2.64e-08 | 3 |
androgen binding protein secreting cell | 3.95e-07 | 1 |
seminiferous tubule epithelial cell | 3.95e-07 | 1 |
Sertoli cell | 3.95e-07 | 1 |
fibroblast of the conjuctiva | 5.89e-07 | 1 |
perirenal preadipocyte | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.10e-10 | 5 |
myotonic disease | 2.10e-10 | 5 |
muscle tissue disease | 2.10e-10 | 5 |
myopathy | 2.10e-10 | 5 |
muscular disease | 2.10e-10 | 5 |
myotonic dystrophy | 2.10e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.