FFCP PHASE1:Mm9::chr10:7445859..7445881,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23924|HGNC=|MCL_coexpression_id=7|UniProt=G3UX83|association_with_transcript=53bp_to_ENSMUST00000173400_5end|description=CAGE_peak_2_at_Katna1_5end|id=chr10:7445859..7445881,+|ontology_enrichment_celltype=CL:0000063!1.94e-12!66;CL:0000988!1.38e-10!32;CL:0002032!1.38e-10!32;CL:0000037!1.38e-10!32;CL:0000566!1.38e-10!32;CL:0000837!1.38e-10!32;CL:0000838!5.52e-08!12;CL:0002031!1.17e-07!25;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000084!2.37e-07!11;CL:0000827!2.37e-07!11;CL:0000791!3.58e-07!9;CL:0000789!3.58e-07!9;CL:0002420!3.58e-07!9;CL:0002419!3.58e-07!9;CL:0000790!3.58e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.05e-10,32;CL:0002032,1.05e-10,32;CL:0000037,1.05e-10,32;CL:0000837,1.05e-10,32;CL:0000838,5.38e-08,12;CL:0002031,9.14e-08,25;CL:0000542,1.24e-07,13;CL:0000051,1.24e-07,13;CL:0000084,2.31e-07,11;CL:0000827,2.31e-07,11;CL:0000791,3.50e-07,9;CL:0000789,3.50e-07,9;CL:0002420,3.50e-07,9;CL:0002419,3.50e-07,9;CL:0000790,3.50e-07,9;CL:0002320,8.60e-07,46;CL:0000134,8.60e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.83e-09!48;UBERON:0000072!8.43e-09!27;UBERON:0000490!2.38e-08!66;UBERON:0000065!2.75e-08!41;UBERON:0002390!3.59e-08!45;UBERON:0003061!3.59e-08!45;UBERON:0001004!5.22e-08!42;UBERON:0006562!1.22e-07!24;UBERON:0001557!1.22e-07!24;UBERON:0001042!1.22e-07!24;UBERON:0008814!1.22e-07!24;UBERON:0009145!1.22e-07!24;UBERON:0004177!1.32e-07!29;UBERON:0000344!1.68e-07!15;UBERON:0004923!2.32e-07!24;UBERON:0002370!2.67e-07!23;UBERON:0000974!2.67e-07!23;UBERON:0004807!2.67e-07!23;UBERON:0005058!2.67e-07!23;UBERON:0003351!2.67e-07!23;UBERON:0009113!2.67e-07!23;UBERON:0003295!2.67e-07!23;UBERON:0009722!2.67e-07!23;UBERON:0005562!2.67e-07!23;UBERON:0007690!2.67e-07!23;UBERON:0005911!4.49e-07!69;UBERON:0004119!4.52e-07!130;UBERON:0000925!4.52e-07!130;UBERON:0006595!4.52e-07!130;UBERON:0001007!6.27e-07!128;UBERON:0001555!6.27e-07!128;UBERON:0007026!6.27e-07!128;UBERON:0003408!6.49e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.89e-10,118;UBERON:0000925,3.89e-10,118;UBERON:0006595,3.89e-10,118;UBERON:0001007,5.53e-10,116;UBERON:0001555,5.53e-10,116;UBERON:0007026,5.53e-10,116;UBERON:0002193,1.59e-09,48;UBERON:0002405,1.59e-09,48;UBERON:0004921,2.88e-09,114;UBERON:0000072,8.18e-09,27;UBERON:0000077,1.73e-08,35;UBERON:0000490,2.06e-08,66;UBERON:0000065,2.67e-08,41;UBERON:0002390,3.17e-08,45;UBERON:0003061,3.17e-08,45;UBERON:0001004,5.08e-08,42;UBERON:0006562,1.19e-07,24;UBERON:0001557,1.19e-07,24;UBERON:0001042,1.19e-07,24;UBERON:0008814,1.19e-07,24;UBERON:0009145,1.19e-07,24;UBERON:0004177,1.28e-07,29;UBERON:0005057,1.28e-07,29;UBERON:0000344,1.64e-07,15;UBERON:0004923,2.26e-07,24;UBERON:0002370,2.60e-07,23;UBERON:0000974,2.60e-07,23;UBERON:0004807,2.60e-07,23;UBERON:0005058,2.60e-07,23;UBERON:0003351,2.60e-07,23;UBERON:0009113,2.60e-07,23;UBERON:0003295,2.60e-07,23;UBERON:0009722,2.60e-07,23;UBERON:0005562,2.60e-07,23;UBERON:0007690,2.60e-07,23;UBERON:0005911,3.95e-07,69;UBERON:0000926,6.01e-07,120;UBERON:0004120,6.01e-07,120;UBERON:0006603,6.01e-07,120;UBERON:0003408,6.34e-07,24;UBERON:0002384,8.60e-07,46|phase1_expression=4.00372117761985,36.9913932097723,32.7599452360466,23.8946726932396,29.0519523368881,22.1600638923695,22.8940387783615,28.5362544805884,146.98342592634,150.26942589872,44.0030178339548,41.3219783595843,19.8592846720199,23.1664066410343,6.99530499812892,9.11138703254217,4.89693314689703,19.0854610041734,18.6475629703805,16.9755860719212,4.25216450755349,6.85107563286109,7.05239430675126,14.2393256286132,11.6998733344257,21.8208146363708,22.830385796431,23.9173068281337,7.41091335879858,7.05684363327806,8.42575940490158,8.25539875497521,9.84103660135312,0,6.93243887403059,8.6442015586416,11.4334839506927,13.811543814318,21.0960543021426,15.1821885752402,39.999741186109,15.0270006690858,18.934903768215,8.43508680436368,9.32667767219534,12.114085642671,0,1.52617609466313,1.31811709640683,0.972149495371417,0.55994568650145,0,34.5632168478937,36.9934692425786,32.601098516819,3.08711323243136,3.72493471920384,4.64104883049698,0.606949382578793,0,0.633831403506179,0,0,0.449949858640699,1.97773272513395,2.1314403448383,0,0.768436610643109,0.933206510776299,0.675029691658453,0.420649922702764,0.571301968807607,0.662605622854841,1.46988959057945,0.766763768145891,0,1.10115880999389,0.255374676170375,0.46081959976873,0.263772575460388,0.548925861614458,0.52091337055676,0.558365998002762,0,0.916789486660861,1.17851434189467,0.996601765593721,0.931997229126503,2.57469057332826,1.88928900266964,36.5229255764114,4.30211938490693,4.75979933595425,3.2382191498269,3.24888208723835,2.68816132258401,3.23022166303029,4.09032774187339,7.01422212427746,3.5333957451034,3.80277233397037,3.84979432242953,2.54805239706646,7.11066703153331,9.74209684550464,9.88103475352884,11.62706223534,3.76806803072898,30.0367945030719,2.9688427812965,2.60227990149204,2.43572382649713,2.07553947530453,2.56228488939458,5.526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| ||
|EntrezGene=23924 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=G3UX83 | |||
|association_with_transcript=53bp_to_ENSMUST00000173400_5end | |||
|description=CAGE_peak_2_at_Katna1_5end | |||
|id=chr10:7445859..7445881,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.94e-12!66;CL:0000988!1.38e-10!32;CL:0002032!1.38e-10!32;CL:0000037!1.38e-10!32;CL:0000566!1.38e-10!32;CL:0000837!1.38e-10!32;CL:0000838!5.52e-08!12;CL:0002031!1.17e-07!25;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000084!2.37e-07!11;CL:0000827!2.37e-07!11;CL:0000791!3.58e-07!9;CL:0000789!3.58e-07!9;CL:0002420!3.58e-07!9;CL:0002419!3.58e-07!9;CL:0000790!3.58e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.05e-10,32;CL:0002032,1.05e-10,32;CL:0000037,1.05e-10,32;CL:0000837,1.05e-10,32;CL:0000838,5.38e-08,12;CL:0002031,9.14e-08,25;CL:0000542,1.24e-07,13;CL:0000051,1.24e-07,13;CL:0000084,2.31e-07,11;CL:0000827,2.31e-07,11;CL:0000791,3.50e-07,9;CL:0000789,3.50e-07,9;CL:0002420,3.50e-07,9;CL:0002419,3.50e-07,9;CL:0000790,3.50e-07,9;CL:0002320,8.60e-07,46;CL:0000134,8.60e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.83e-09!48;UBERON:0000072!8.43e-09!27;UBERON:0000490!2.38e-08!66;UBERON:0000065!2.75e-08!41;UBERON:0002390!3.59e-08!45;UBERON:0003061!3.59e-08!45;UBERON:0001004!5.22e-08!42;UBERON:0006562!1.22e-07!24;UBERON:0001557!1.22e-07!24;UBERON:0001042!1.22e-07!24;UBERON:0008814!1.22e-07!24;UBERON:0009145!1.22e-07!24;UBERON:0004177!1.32e-07!29;UBERON:0000344!1.68e-07!15;UBERON:0004923!2.32e-07!24;UBERON:0002370!2.67e-07!23;UBERON:0000974!2.67e-07!23;UBERON:0004807!2.67e-07!23;UBERON:0005058!2.67e-07!23;UBERON:0003351!2.67e-07!23;UBERON:0009113!2.67e-07!23;UBERON:0003295!2.67e-07!23;UBERON:0009722!2.67e-07!23;UBERON:0005562!2.67e-07!23;UBERON:0007690!2.67e-07!23;UBERON:0005911!4.49e-07!69;UBERON:0004119!4.52e-07!130;UBERON:0000925!4.52e-07!130;UBERON:0006595!4.52e-07!130;UBERON:0001007!6.27e-07!128;UBERON:0001555!6.27e-07!128;UBERON:0007026!6.27e-07!128;UBERON:0003408!6.49e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.89e-10,118;UBERON:0000925,3.89e-10,118;UBERON:0006595,3.89e-10,118;UBERON:0001007,5.53e-10,116;UBERON:0001555,5.53e-10,116;UBERON:0007026,5.53e-10,116;UBERON:0002193,1.59e-09,48;UBERON:0002405,1.59e-09,48;UBERON:0004921,2.88e-09,114;UBERON:0000072,8.18e-09,27;UBERON:0000077,1.73e-08,35;UBERON:0000490,2.06e-08,66;UBERON:0000065,2.67e-08,41;UBERON:0002390,3.17e-08,45;UBERON:0003061,3.17e-08,45;UBERON:0001004,5.08e-08,42;UBERON:0006562,1.19e-07,24;UBERON:0001557,1.19e-07,24;UBERON:0001042,1.19e-07,24;UBERON:0008814,1.19e-07,24;UBERON:0009145,1.19e-07,24;UBERON:0004177,1.28e-07,29;UBERON:0005057,1.28e-07,29;UBERON:0000344,1.64e-07,15;UBERON:0004923,2.26e-07,24;UBERON:0002370,2.60e-07,23;UBERON:0000974,2.60e-07,23;UBERON:0004807,2.60e-07,23;UBERON:0005058,2.60e-07,23;UBERON:0003351,2.60e-07,23;UBERON:0009113,2.60e-07,23;UBERON:0003295,2.60e-07,23;UBERON:0009722,2.60e-07,23;UBERON:0005562,2.60e-07,23;UBERON:0007690,2.60e-07,23;UBERON:0005911,3.95e-07,69;UBERON:0000926,6.01e-07,120;UBERON:0004120,6.01e-07,120;UBERON:0006603,6.01e-07,120;UBERON:0003408,6.34e-07,24;UBERON:0002384,8.60e-07,46 | |||
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| |||
|short_description=p2@Katna1 | |||
}} |
Revision as of 17:20, 12 September 2013
Short description: | p2@Katna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Katna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 53bp_to_ENSMUST00000173400_5end |
EntrezGene: | Katna1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.05e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.05e-10 | 32 |
hematopoietic stem cell | 1.05e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.05e-10 | 32 |
lymphoid lineage restricted progenitor cell | 5.38e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 9.14e-08 | 25 |
lymphocyte | 1.24e-07 | 13 |
common lymphoid progenitor | 1.24e-07 | 13 |
T cell | 2.31e-07 | 11 |
pro-T cell | 2.31e-07 | 11 |
mature alpha-beta T cell | 3.50e-07 | 9 |
alpha-beta T cell | 3.50e-07 | 9 |
immature T cell | 3.50e-07 | 9 |
mature T cell | 3.50e-07 | 9 |
immature alpha-beta T cell | 3.50e-07 | 9 |
connective tissue cell | 8.60e-07 | 46 |
mesenchymal cell | 8.60e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.