FFCP PHASE1:Hg19::chr2:50809613..50809617,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C335|description=CAGE_peak_at_chr2:50809613..50809617,-|id=chr2:50809613..50809617,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.31e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.74e-47!57;UBERON:0005068!1.74e-47!57;UBERON:0006241!1.74e-47!57;UBERON:0007135!1.74e-47!57;UBERON:0002616!3.81e-42!59;UBERON:0001017!3.94e-38!82;UBERON:0001893!4.39e-38!34;UBERON:0002780!5.94e-38!41;UBERON:0001890!5.94e-38!41;UBERON:0006240!5.94e-38!41;UBERON:0003080!6.17e-37!42;UBERON:0005743!4.96e-36!86;UBERON:0002791!1.80e-35!33;UBERON:0002020!1.26e-34!34;UBERON:0003528!1.26e-34!34;UBERON:0000955!1.69e-34!69;UBERON:0006238!1.69e-34!69;UBERON:0002346!1.80e-34!90;UBERON:0000073!3.65e-34!94;UBERON:0001016!3.65e-34!94;UBERON:0003075!6.57e-34!86;UBERON:0007284!6.57e-34!86;UBERON:0001869!7.84e-33!32;UBERON:0002619!1.07e-29!22;UBERON:0001950!4.44e-28!20;UBERON:0000956!7.11e-26!25;UBERON:0000203!7.11e-26!25;UBERON:0007023!3.27e-25!115;UBERON:0003056!7.10e-24!61;UBERON:0000924!9.75e-22!173;UBERON:0006601!9.75e-22!173;UBERON:0004121!5.51e-21!169;UBERON:0000033!4.43e-18!123;UBERON:0000153!6.35e-17!129;UBERON:0007811!6.35e-17!129;UBERON:0000025!6.84e-13!194;UBERON:0001872!2.89e-12!5;UBERON:0001871!5.34e-12!7;UBERON:0003076!2.02e-11!15;UBERON:0003057!2.02e-11!15;UBERON:0002298!4.82e-11!8;UBERON:0004733!1.22e-10!12;UBERON:0002028!1.22e-10!12;UBERON:0007277!1.22e-10!12;UBERON:0000200!2.99e-10!6;UBERON:0002420!3.49e-10!9;UBERON:0007245!3.49e-10!9;UBERON:0010009!3.49e-10!9;UBERON:0010011!3.49e-10!9;UBERON:0000454!3.49e-10!9;UBERON:0002308!4.16e-10!9;UBERON:0000125!4.16e-10!9;UBERON:0004732!9.03e-10!13;UBERON:0004111!6.71e-09!241;UBERON:0000369!9.93e-09!4;UBERON:0002435!9.93e-09!4;UBERON:0000204!9.93e-09!4;UBERON:0010082!9.93e-09!4;UBERON:0009663!1.52e-08!7;UBERON:0000483!8.69e-08!309;UBERON:0000119!1.24e-07!312;UBERON:0000349!1.77e-07!5;UBERON:0002680!4.36e-07!9;UBERON:0001895!4.36e-07!9;UBERON:0010092!4.36e-07!9;UBERON:0000477!5.08e-07!286|ontology_enrichment_uberon_v019=UBERON:0001871;1.80e-23;6!UBERON:0002771;5.69e-21;2!UBERON:0001950;9.57e-18;20!UBERON:0002619;2.78e-16;22!UBERON:0000956;1.66e-14;25!UBERON:0000203;1.66e-14;25!UBERON:0002114;1.83e-14;2!UBERON:0003528;2.21e-10;34!UBERON:0002020;2.21e-10;34!UBERON:0002791;1.74e-09;32!UBERON:0001869;1.74e-09;32!UBERON:0000073;1.78e-09;53!UBERON:0002616;1.78e-09;53!UBERON:0002021;2.63e-09;5!UBERON:0002108;3.22e-09;4!UBERON:0000922;1.03e-08;49!UBERON:0002780;4.50e-08;41!UBERON:0001890;4.50e-08;41!UBERON:0002037;5.73e-08;6!UBERON:0000200;6.78e-08;6!UBERON:0001893;1.49e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.02e-23,6;UBERON:0002771,6.96e-21,2;UBERON:0001950,1.04e-17,20;UBERON:0002619,3.01e-16,22;UBERON:0002114,1.60e-14,2;UBERON:0000956,1.78e-14,25;UBERON:0000203,1.78e-14,25;UBERON:0000073,2.04e-12,53;UBERON:0002616,2.04e-12,53;UBERON:0001049,8.46e-12,56;UBERON:0005068,8.46e-12,56;UBERON:0006241,8.46e-12,56;UBERON:0007135,8.46e-12,56;UBERON:0002791,1.38e-11,32;UBERON:0001869,1.38e-11,32;UBERON:0003528,5.68e-11,34;UBERON:0002020,5.68e-11,34;UBERON:0001893,5.68e-11,34;UBERON:0000955,9.88e-10,68;UBERON:0006238,9.88e-10,68;UBERON:0002021,2.74e-09,5;UBERON:0002780,2.82e-09,41;UBERON:0001890,2.82e-09,41;UBERON:0003080,2.82e-09,41;UBERON:0006240,2.82e-09,41;UBERON:0002108,2.97e-09,4;UBERON:0001017,2.64e-08,81;UBERON:0003075,2.64e-08,82;UBERON:0007284,2.64e-08,82;UBERON:0002037,5.54e-08,6;UBERON:0006215,5.54e-08,6;UBERON:0002346,5.98e-08,86;UBERON:0000200,7.25e-08,6;UBERON:0001016,1.50e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_at_chr2:50809613..50809617,- | |||
|id=chr2:50809613..50809617,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.31e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.74e-47!57;UBERON:0005068!1.74e-47!57;UBERON:0006241!1.74e-47!57;UBERON:0007135!1.74e-47!57;UBERON:0002616!3.81e-42!59;UBERON:0001017!3.94e-38!82;UBERON:0001893!4.39e-38!34;UBERON:0002780!5.94e-38!41;UBERON:0001890!5.94e-38!41;UBERON:0006240!5.94e-38!41;UBERON:0003080!6.17e-37!42;UBERON:0005743!4.96e-36!86;UBERON:0002791!1.80e-35!33;UBERON:0002020!1.26e-34!34;UBERON:0003528!1.26e-34!34;UBERON:0000955!1.69e-34!69;UBERON:0006238!1.69e-34!69;UBERON:0002346!1.80e-34!90;UBERON:0000073!3.65e-34!94;UBERON:0001016!3.65e-34!94;UBERON:0003075!6.57e-34!86;UBERON:0007284!6.57e-34!86;UBERON:0001869!7.84e-33!32;UBERON:0002619!1.07e-29!22;UBERON:0001950!4.44e-28!20;UBERON:0000956!7.11e-26!25;UBERON:0000203!7.11e-26!25;UBERON:0007023!3.27e-25!115;UBERON:0003056!7.10e-24!61;UBERON:0000924!9.75e-22!173;UBERON:0006601!9.75e-22!173;UBERON:0004121!5.51e-21!169;UBERON:0000033!4.43e-18!123;UBERON:0000153!6.35e-17!129;UBERON:0007811!6.35e-17!129;UBERON:0000025!6.84e-13!194;UBERON:0001872!2.89e-12!5;UBERON:0001871!5.34e-12!7;UBERON:0003076!2.02e-11!15;UBERON:0003057!2.02e-11!15;UBERON:0002298!4.82e-11!8;UBERON:0004733!1.22e-10!12;UBERON:0002028!1.22e-10!12;UBERON:0007277!1.22e-10!12;UBERON:0000200!2.99e-10!6;UBERON:0002420!3.49e-10!9;UBERON:0007245!3.49e-10!9;UBERON:0010009!3.49e-10!9;UBERON:0010011!3.49e-10!9;UBERON:0000454!3.49e-10!9;UBERON:0002308!4.16e-10!9;UBERON:0000125!4.16e-10!9;UBERON:0004732!9.03e-10!13;UBERON:0004111!6.71e-09!241;UBERON:0000369!9.93e-09!4;UBERON:0002435!9.93e-09!4;UBERON:0000204!9.93e-09!4;UBERON:0010082!9.93e-09!4;UBERON:0009663!1.52e-08!7;UBERON:0000483!8.69e-08!309;UBERON:0000119!1.24e-07!312;UBERON:0000349!1.77e-07!5;UBERON:0002680!4.36e-07!9;UBERON:0001895!4.36e-07!9;UBERON:0010092!4.36e-07!9;UBERON:0000477!5.08e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.80e-23;6!UBERON:0002771;5.69e-21;2!UBERON:0001950;9.57e-18;20!UBERON:0002619;2.78e-16;22!UBERON:0000956;1.66e-14;25!UBERON:0000203;1.66e-14;25!UBERON:0002114;1.83e-14;2!UBERON:0003528;2.21e-10;34!UBERON:0002020;2.21e-10;34!UBERON:0002791;1.74e-09;32!UBERON:0001869;1.74e-09;32!UBERON:0000073;1.78e-09;53!UBERON:0002616;1.78e-09;53!UBERON:0002021;2.63e-09;5!UBERON:0002108;3.22e-09;4!UBERON:0000922;1.03e-08;49!UBERON:0002780;4.50e-08;41!UBERON:0001890;4.50e-08;41!UBERON:0002037;5.73e-08;6!UBERON:0000200;6.78e-08;6!UBERON:0001893;1.49e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.02e-23,6;UBERON:0002771,6.96e-21,2;UBERON:0001950,1.04e-17,20;UBERON:0002619,3.01e-16,22;UBERON:0002114,1.60e-14,2;UBERON:0000956,1.78e-14,25;UBERON:0000203,1.78e-14,25;UBERON:0000073,2.04e-12,53;UBERON:0002616,2.04e-12,53;UBERON:0001049,8.46e-12,56;UBERON:0005068,8.46e-12,56;UBERON:0006241,8.46e-12,56;UBERON:0007135,8.46e-12,56;UBERON:0002791,1.38e-11,32;UBERON:0001869,1.38e-11,32;UBERON:0003528,5.68e-11,34;UBERON:0002020,5.68e-11,34;UBERON:0001893,5.68e-11,34;UBERON:0000955,9.88e-10,68;UBERON:0006238,9.88e-10,68;UBERON:0002021,2.74e-09,5;UBERON:0002780,2.82e-09,41;UBERON:0001890,2.82e-09,41;UBERON:0003080,2.82e-09,41;UBERON:0006240,2.82e-09,41;UBERON:0002108,2.97e-09,4;UBERON:0001017,2.64e-08,81;UBERON:0003075,2.64e-08,82;UBERON:0007284,2.64e-08,82;UBERON:0002037,5.54e-08,6;UBERON:0006215,5.54e-08,6;UBERON:0002346,5.98e-08,86;UBERON:0000200,7.25e-08,6;UBERON:0001016,1.50e-07,89 | |||
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|short_description=p@chr2:50809613..50809617,- | |||
}} |
Revision as of 18:55, 12 September 2013
Short description: | p@chr2:50809613..50809617, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:50809613..50809617, - |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.02e-23 | 6 |
middle temporal gyrus | 6.96e-21 | 2 |
neocortex | 1.04e-17 | 20 |
regional part of cerebral cortex | 3.01e-16 | 22 |
duodenum | 1.60e-14 | 2 |
cerebral cortex | 1.78e-14 | 25 |
pallium | 1.78e-14 | 25 |
regional part of nervous system | 2.04e-12 | 53 |
regional part of brain | 2.04e-12 | 53 |
neural tube | 8.46e-12 | 56 |
neural rod | 8.46e-12 | 56 |
future spinal cord | 8.46e-12 | 56 |
neural keel | 8.46e-12 | 56 |
regional part of telencephalon | 1.38e-11 | 32 |
cerebral hemisphere | 1.38e-11 | 32 |
brain grey matter | 5.68e-11 | 34 |
gray matter | 5.68e-11 | 34 |
telencephalon | 5.68e-11 | 34 |
brain | 9.88e-10 | 68 |
future brain | 9.88e-10 | 68 |
occipital lobe | 2.74e-09 | 5 |
regional part of forebrain | 2.82e-09 | 41 |
forebrain | 2.82e-09 | 41 |
anterior neural tube | 2.82e-09 | 41 |
future forebrain | 2.82e-09 | 41 |
small intestine | 2.97e-09 | 4 |
central nervous system | 2.64e-08 | 81 |
neural plate | 2.64e-08 | 82 |
presumptive neural plate | 2.64e-08 | 82 |
cerebellum | 5.54e-08 | 6 |
rhombic lip | 5.54e-08 | 6 |
neurectoderm | 5.98e-08 | 86 |
gyrus | 7.25e-08 | 6 |
nervous system | 1.50e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.