FFCP PHASE1:Mm9::chr11:60955959..60955973,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57916|HGNC=|MCL_coexpression_id=202|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137832_5end|description=CAGE_peak_2_at_Tnfrsf13b_5end|id=chr11:60955959..60955973,+|ontology_enrichment_celltype=CL:0000988!3.58e-11!32;CL:0002032!3.58e-11!32;CL:0000037!3.58e-11!32;CL:0000566!3.58e-11!32;CL:0000837!3.58e-11!32;CL:0002031!7.26e-09!25;CL:0000838!1.83e-07!12;CL:0002320!7.63e-07!46;CL:0000134!7.63e-07!46;CL:0000738!9.50e-07!17;CL:0002087!9.50e-07!17;CL:0000084!9.61e-07!11;CL:0000827!9.61e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-13,32;CL:0002032,1.36e-13,32;CL:0000037,1.36e-13,32;CL:0000837,1.36e-13,32;CL:0002031,4.20e-11,25;CL:0002320,2.44e-10,46;CL:0000134,2.44e-10,46;CL:0000838,2.75e-08,12;CL:0000219,4.33e-08,54;CL:0000553,6.02e-08,6;CL:0000556,6.02e-08,6;CL:0000542,1.54e-07,13;CL:0000051,1.54e-07,13;CL:0000049,2.26e-07,19;CL:0000084,6.62e-07,11;CL:0000827,6.62e-07,11;CL:0000738,8.32e-07,17;CL:0002087,8.32e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.15e-24!48;UBERON:0002390!7.68e-22!45;UBERON:0003061!7.68e-22!45;UBERON:0002405!8.57e-19!70;UBERON:0004177!3.65e-14!29;UBERON:0003081!1.99e-12!88;UBERON:0002370!1.32e-10!23;UBERON:0000974!1.32e-10!23;UBERON:0004807!1.32e-10!23;UBERON:0005058!1.32e-10!23;UBERON:0003351!1.32e-10!23;UBERON:0009113!1.32e-10!23;UBERON:0003295!1.32e-10!23;UBERON:0009722!1.32e-10!23;UBERON:0005562!1.32e-10!23;UBERON:0007690!1.32e-10!23;UBERON:0000065!4.77e-10!41;UBERON:0005057!6.31e-10!51;UBERON:0006562!8.83e-10!24;UBERON:0003408!8.83e-10!24;UBERON:0001557!8.83e-10!24;UBERON:0001042!8.83e-10!24;UBERON:0008814!8.83e-10!24;UBERON:0009145!8.83e-10!24;UBERON:0001004!1.65e-09!42;UBERON:0002371!2.45e-08!16;UBERON:0001474!3.49e-08!22;UBERON:0004765!3.49e-08!22;UBERON:0001434!3.49e-08!22;UBERON:0000072!1.01e-07!27;UBERON:0000926!1.17e-07!193;UBERON:0004120!1.17e-07!193;UBERON:0006603!1.17e-07!193;UBERON:0001041!4.96e-07!92;UBERON:0002384!7.63e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.94e-33,48;UBERON:0002405,8.94e-33,48;UBERON:0002390,9.62e-29,45;UBERON:0003061,9.62e-29,45;UBERON:0004177,5.27e-22,29;UBERON:0005057,5.27e-22,29;UBERON:0000077,2.87e-17,35;UBERON:0002370,4.12e-16,23;UBERON:0000974,4.12e-16,23;UBERON:0004807,4.12e-16,23;UBERON:0005058,4.12e-16,23;UBERON:0003351,4.12e-16,23;UBERON:0009113,4.12e-16,23;UBERON:0003295,4.12e-16,23;UBERON:0009722,4.12e-16,23;UBERON:0005562,4.12e-16,23;UBERON:0007690,4.12e-16,23;UBERON:0006562,2.87e-15,24;UBERON:0003408,2.87e-15,24;UBERON:0001557,2.87e-15,24;UBERON:0001042,2.87e-15,24;UBERON:0008814,2.87e-15,24;UBERON:0009145,2.87e-15,24;UBERON:0003081,2.73e-13,87;UBERON:0000072,4.06e-13,27;UBERON:0002384,2.44e-10,46;UBERON:0000926,8.67e-10,120;UBERON:0004120,8.67e-10,120;UBERON:0006603,8.67e-10,120;UBERON:0007811,7.44e-09,36;UBERON:0000065,2.61e-08,41;UBERON:0001004,5.12e-08,42;UBERON:0002371,1.28e-07,16;UBERON:0002106,3.02e-07,6;UBERON:0004457,3.02e-07,6;UBERON:0000042,3.02e-07,6;UBERON:0004854,3.02e-07,6;UBERON:0009034,3.02e-07,6;UBERON:0002095,3.02e-07,6;UBERON:0004782,3.02e-07,6;UBERON:0003281,3.02e-07,6;UBERON:0009664,3.02e-07,6;UBERON:0002296,3.02e-07,6;UBERON:0005602,3.02e-07,6;UBERON:0001179,3.02e-07,6;UBERON:0006293,3.02e-07,6;UBERON:0000153,8.29e-07,43|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.563154888606667,0.234064526321993,0.68487187290202,0.558405112967355,2.73921167889929,2.79745287740792,0.666219523631325,1.61980213911861,1.39912375625629,11.8298312009339,11.6547268564878,5.94145512517242,0.0850432901510698,1.39007331681239,2.61199789138935,1.43993180514066,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.906676722619,1.57057123192139,1.76469446409304,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,4.36234775750115,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,3.6251303710604,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.578397427679647,0.884610551949874,0.161766849947409,2.42925670306433,0.969750506270444,0,0,0.209446706813455,1.53274233125155,1.43778149407104,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0,2.86136032403214,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,2.80885274925294,0.772043721344145,0.852490498186778,0.414251545071004,0,0,0.23674473558521,0.590292695242212,0,0,0,0.350296027101508,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0.50925170356284,0.28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| ||
|EntrezGene=57916 | |||
|HGNC= | |||
|MCL_coexpression_id=202 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137832_5end | |||
|description=CAGE_peak_2_at_Tnfrsf13b_5end | |||
|id=chr11:60955959..60955973,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.58e-11!32;CL:0002032!3.58e-11!32;CL:0000037!3.58e-11!32;CL:0000566!3.58e-11!32;CL:0000837!3.58e-11!32;CL:0002031!7.26e-09!25;CL:0000838!1.83e-07!12;CL:0002320!7.63e-07!46;CL:0000134!7.63e-07!46;CL:0000738!9.50e-07!17;CL:0002087!9.50e-07!17;CL:0000084!9.61e-07!11;CL:0000827!9.61e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-13,32;CL:0002032,1.36e-13,32;CL:0000037,1.36e-13,32;CL:0000837,1.36e-13,32;CL:0002031,4.20e-11,25;CL:0002320,2.44e-10,46;CL:0000134,2.44e-10,46;CL:0000838,2.75e-08,12;CL:0000219,4.33e-08,54;CL:0000553,6.02e-08,6;CL:0000556,6.02e-08,6;CL:0000542,1.54e-07,13;CL:0000051,1.54e-07,13;CL:0000049,2.26e-07,19;CL:0000084,6.62e-07,11;CL:0000827,6.62e-07,11;CL:0000738,8.32e-07,17;CL:0002087,8.32e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.15e-24!48;UBERON:0002390!7.68e-22!45;UBERON:0003061!7.68e-22!45;UBERON:0002405!8.57e-19!70;UBERON:0004177!3.65e-14!29;UBERON:0003081!1.99e-12!88;UBERON:0002370!1.32e-10!23;UBERON:0000974!1.32e-10!23;UBERON:0004807!1.32e-10!23;UBERON:0005058!1.32e-10!23;UBERON:0003351!1.32e-10!23;UBERON:0009113!1.32e-10!23;UBERON:0003295!1.32e-10!23;UBERON:0009722!1.32e-10!23;UBERON:0005562!1.32e-10!23;UBERON:0007690!1.32e-10!23;UBERON:0000065!4.77e-10!41;UBERON:0005057!6.31e-10!51;UBERON:0006562!8.83e-10!24;UBERON:0003408!8.83e-10!24;UBERON:0001557!8.83e-10!24;UBERON:0001042!8.83e-10!24;UBERON:0008814!8.83e-10!24;UBERON:0009145!8.83e-10!24;UBERON:0001004!1.65e-09!42;UBERON:0002371!2.45e-08!16;UBERON:0001474!3.49e-08!22;UBERON:0004765!3.49e-08!22;UBERON:0001434!3.49e-08!22;UBERON:0000072!1.01e-07!27;UBERON:0000926!1.17e-07!193;UBERON:0004120!1.17e-07!193;UBERON:0006603!1.17e-07!193;UBERON:0001041!4.96e-07!92;UBERON:0002384!7.63e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.94e-33,48;UBERON:0002405,8.94e-33,48;UBERON:0002390,9.62e-29,45;UBERON:0003061,9.62e-29,45;UBERON:0004177,5.27e-22,29;UBERON:0005057,5.27e-22,29;UBERON:0000077,2.87e-17,35;UBERON:0002370,4.12e-16,23;UBERON:0000974,4.12e-16,23;UBERON:0004807,4.12e-16,23;UBERON:0005058,4.12e-16,23;UBERON:0003351,4.12e-16,23;UBERON:0009113,4.12e-16,23;UBERON:0003295,4.12e-16,23;UBERON:0009722,4.12e-16,23;UBERON:0005562,4.12e-16,23;UBERON:0007690,4.12e-16,23;UBERON:0006562,2.87e-15,24;UBERON:0003408,2.87e-15,24;UBERON:0001557,2.87e-15,24;UBERON:0001042,2.87e-15,24;UBERON:0008814,2.87e-15,24;UBERON:0009145,2.87e-15,24;UBERON:0003081,2.73e-13,87;UBERON:0000072,4.06e-13,27;UBERON:0002384,2.44e-10,46;UBERON:0000926,8.67e-10,120;UBERON:0004120,8.67e-10,120;UBERON:0006603,8.67e-10,120;UBERON:0007811,7.44e-09,36;UBERON:0000065,2.61e-08,41;UBERON:0001004,5.12e-08,42;UBERON:0002371,1.28e-07,16;UBERON:0002106,3.02e-07,6;UBERON:0004457,3.02e-07,6;UBERON:0000042,3.02e-07,6;UBERON:0004854,3.02e-07,6;UBERON:0009034,3.02e-07,6;UBERON:0002095,3.02e-07,6;UBERON:0004782,3.02e-07,6;UBERON:0003281,3.02e-07,6;UBERON:0009664,3.02e-07,6;UBERON:0002296,3.02e-07,6;UBERON:0005602,3.02e-07,6;UBERON:0001179,3.02e-07,6;UBERON:0006293,3.02e-07,6;UBERON:0000153,8.29e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.563154888606667,0.234064526321993,0.68487187290202,0.558405112967355,2.73921167889929,2.79745287740792,0.666219523631325,1.61980213911861,1.39912375625629,11.8298312009339,11.6547268564878,5.94145512517242,0.0850432901510698,1.39007331681239,2.61199789138935,1.43993180514066,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.906676722619,1.57057123192139,1.76469446409304,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,4.36234775750115,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,3.6251303710604,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.578397427679647,0.884610551949874,0.161766849947409,2.42925670306433,0.969750506270444,0,0,0.209446706813455,1.53274233125155,1.43778149407104,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0,2.86136032403214,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,2.80885274925294,0.772043721344145,0.852490498186778,0.414251545071004,0,0,0.23674473558521,0.590292695242212,0,0,0,0.350296027101508,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,0,0,0.936113019343682,0,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0.704070744865506,0.167506257441816,0.714130922658041,0.585400943573396,0.945810864637146,0.44292937929755,0.797273843287435,0.327726629431476,1.03610989119537,0.867894351489069,1.50791283939272,0.54390568381871,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0.49465875882444,0.484393280087717,0.120625849856312,0.238744688006273,0,0,0,2.05045056957423,0.619160603889667,1.11116716421827,3.01389531207506,3.69074414846768,2.74533807847827,2.20971958992012,1.81936888020755,2.3493995546752,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,6.32022241256356,1.01362607645082,0.616265742988964,2.33857481360031,2.8644271306797,4.37098980518783,4.80781798079875,6.05527061415767,6.25991989678515,7.31585343887998,7.36031151498936,6.1398464866044,7.02346443974405,7.83075244616512,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0.824140228955577,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0,0.476293691283074,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Tnfrsf13b | |||
}} |
Revision as of 20:14, 12 September 2013
Short description: | p2@Tnfrsf13b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tnfrsf13b_5end |
Coexpression cluster: | MCL_coexpression_mm9:202 |
Association with transcript: | 0bp_to_ENSMUST00000137832_5end |
EntrezGene: | Tnfrsf13b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.36e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.36e-13 | 32 |
hematopoietic stem cell | 1.36e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.36e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 4.20e-11 | 25 |
connective tissue cell | 2.44e-10 | 46 |
mesenchymal cell | 2.44e-10 | 46 |
lymphoid lineage restricted progenitor cell | 2.75e-08 | 12 |
motile cell | 4.33e-08 | 54 |
megakaryocyte progenitor cell | 6.02e-08 | 6 |
megakaryocyte | 6.02e-08 | 6 |
lymphocyte | 1.54e-07 | 13 |
common lymphoid progenitor | 1.54e-07 | 13 |
common myeloid progenitor | 2.26e-07 | 19 |
T cell | 6.62e-07 | 11 |
pro-T cell | 6.62e-07 | 11 |
leukocyte | 8.32e-07 | 17 |
nongranular leukocyte | 8.32e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.