FFCP PHASE1:Mm9::chr11:97914729..97914781,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217154|HGNC=|MCL_coexpression_id=1|UniProt=Q8R1B0,A2A549|association_with_transcript=0bp_to_ENSMUST00000017544,NM_146028,uc007lfl.1_5end|description=CAGE_peak_1_at_Stac2_5end|id=chr11:97914729..97914781,-|ontology_enrichment_celltype=CL:0000221!2.83e-11!44;CL:0000133!2.83e-11!44;CL:0002319!3.26e-11!43;CL:0000117!3.69e-11!23;CL:0000337!3.69e-11!23;CL:0000540!7.45e-10!33;CL:0000047!7.45e-10!33;CL:0000031!7.45e-10!33;CL:0000404!7.45e-10!33;CL:0000055!5.94e-09!50;CL:0000393!4.32e-08!39;CL:0000211!4.32e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-13,23;CL:0000337,2.30e-13,23;CL:0000221,3.63e-12,44;CL:0000133,3.63e-12,44;CL:0002319,4.48e-12,43;CL:0000540,1.50e-10,33;CL:0000047,1.50e-10,33;CL:0000031,1.50e-10,33;CL:0000404,1.50e-10,33;CL:0000393,1.82e-07,39;CL:0000211,1.82e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.05e-22!102;UBERON:0000924!1.05e-22!102;UBERON:0006601!1.05e-22!102;UBERON:0000073!1.55e-21!75;UBERON:0001016!1.55e-21!75;UBERON:0001017!4.40e-21!73;UBERON:0005743!4.40e-21!73;UBERON:0000033!1.83e-19!63;UBERON:0001049!3.97e-18!52;UBERON:0005068!3.97e-18!52;UBERON:0006241!3.97e-18!52;UBERON:0007135!3.97e-18!52;UBERON:0000955!1.79e-17!50;UBERON:0006238!1.79e-17!50;UBERON:0002020!2.08e-17!34;UBERON:0002346!4.94e-17!71;UBERON:0003075!4.94e-17!71;UBERON:0007284!4.94e-17!71;UBERON:0002616!9.22e-17!49;UBERON:0002791!1.04e-14!29;UBERON:0003528!1.04e-14!29;UBERON:0001893!1.04e-14!29;UBERON:0003056!4.38e-14!49;UBERON:0003080!5.19e-12!40;UBERON:0000956!9.98e-12!21;UBERON:0001869!9.98e-12!21;UBERON:0000203!9.98e-12!21;UBERON:0002780!2.26e-11!39;UBERON:0001890!2.26e-11!39;UBERON:0006240!2.26e-11!39;UBERON:0002619!1.23e-09!17;UBERON:0007811!2.25e-08!86;UBERON:0000153!9.15e-08!94;UBERON:0003076!3.20e-07!12;UBERON:0003057!3.20e-07!12;UBERON:0002021!3.21e-07!10;UBERON:0000411!3.21e-07!10;UBERON:0001950!3.21e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.84e-26,95;UBERON:0000924,6.84e-26,95;UBERON:0006601,6.84e-26,95;UBERON:0001016,2.33e-25,75;UBERON:0001017,8.86e-25,73;UBERON:0000073,1.72e-24,54;UBERON:0002346,6.75e-24,64;UBERON:0003075,6.75e-24,64;UBERON:0007284,6.75e-24,64;UBERON:0001049,1.04e-22,52;UBERON:0005068,1.04e-22,52;UBERON:0006241,1.04e-22,52;UBERON:0007135,1.04e-22,52;UBERON:0010371,3.17e-22,73;UBERON:0002020,2.34e-21,34;UBERON:0000955,2.47e-19,47;UBERON:0006238,2.47e-19,47;UBERON:0002616,1.89e-18,46;UBERON:0003528,6.76e-18,29;UBERON:0002791,6.76e-18,29;UBERON:0001893,6.76e-18,29;UBERON:0003056,2.17e-16,49;UBERON:0003080,7.35e-15,40;UBERON:0000956,1.30e-14,21;UBERON:0001869,1.30e-14,21;UBERON:0000203,1.30e-14,21;UBERON:0002780,4.83e-14,39;UBERON:0001890,4.83e-14,39;UBERON:0006240,4.83e-14,39;UBERON:0010314,6.14e-12,92;UBERON:0002619,6.28e-12,17;UBERON:0003076,7.82e-09,12;UBERON:0003057,7.82e-09,12;UBERON:0002021,7.86e-09,10;UBERON:0000411,7.86e-09,10;UBERON:0001950,7.86e-09,10|phase1_expression=0.480446541314382,1.74487703819681,2.72999543633722,0,0,1.51091344720701,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0.666219523631325,1.01237633694913,0.699561878128147,5.36285681109004,4.9361196098066,3.39511721438424,6.63337663178344,0,0,4.31979541542198,3.44113921600755,2.8711598205751,2.58457197695445,4.30942465371778,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,3.12956537739216,1.74420125104357,7.90870257844099,4.08302788055995,0.979904951377538,0,6.37573903019398,0,0,0.514518872071894,0.85960031981627,0,4.04632921719196,4.7609188134483,3.80298842103708,1.0165335962074,0.889294796111139,14.3983954765024,15.8218618010716,12.7886420690298,2.09720077362883,1.53687322128622,4.76972216618997,9.18040380655497,5.8890989178387,10.5690864229407,9.718215801871,3.91970557487853,3.25874601462004,4.5960939330501,23.1243350098716,25.6651549551227,21.8121277223866,1.97829431595291,1.73826522844578,0.52091337055676,36.0146068711781,12.9435400307286,17.2662019987795,11.1958862479994,8.25755748634797,7.64237727883732,1.06016670666458,2.94729084416464,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0.519572009205738,0,1.12674735821344,0,0,0,0,0,0,1.02765491747154,4.14300613835475,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,0.578397427679647,1.76922110389975,0.808834249737046,0.883366073841574,1.45462575940567,0,9.9545470983926,5.44561437714983,0.766371165625774,0,0,0,36.0995440965623,11.4375150704657,11.5602003943835,45.3681475701842,27.872984849006,14.7529511637288,12.8170597823529,0.407357455401265,0.746441823660558,0.505445516867349,3.36706969418358,0.650602214813519,0.919608417733892,1.80062129805349,1.80845781402858,1.63287597963187,3.97152532883034,4.49768277886698,5.17406741478031,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,2.05782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0.5401861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| ||
|EntrezGene=217154 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8R1B0,A2A549 | |||
|association_with_transcript=0bp_to_ENSMUST00000017544,NM_146028,uc007lfl.1_5end | |||
|description=CAGE_peak_1_at_Stac2_5end | |||
|id=chr11:97914729..97914781,- | |||
|ontology_enrichment_celltype=CL:0000221!2.83e-11!44;CL:0000133!2.83e-11!44;CL:0002319!3.26e-11!43;CL:0000117!3.69e-11!23;CL:0000337!3.69e-11!23;CL:0000540!7.45e-10!33;CL:0000047!7.45e-10!33;CL:0000031!7.45e-10!33;CL:0000404!7.45e-10!33;CL:0000055!5.94e-09!50;CL:0000393!4.32e-08!39;CL:0000211!4.32e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-13,23;CL:0000337,2.30e-13,23;CL:0000221,3.63e-12,44;CL:0000133,3.63e-12,44;CL:0002319,4.48e-12,43;CL:0000540,1.50e-10,33;CL:0000047,1.50e-10,33;CL:0000031,1.50e-10,33;CL:0000404,1.50e-10,33;CL:0000393,1.82e-07,39;CL:0000211,1.82e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.05e-22!102;UBERON:0000924!1.05e-22!102;UBERON:0006601!1.05e-22!102;UBERON:0000073!1.55e-21!75;UBERON:0001016!1.55e-21!75;UBERON:0001017!4.40e-21!73;UBERON:0005743!4.40e-21!73;UBERON:0000033!1.83e-19!63;UBERON:0001049!3.97e-18!52;UBERON:0005068!3.97e-18!52;UBERON:0006241!3.97e-18!52;UBERON:0007135!3.97e-18!52;UBERON:0000955!1.79e-17!50;UBERON:0006238!1.79e-17!50;UBERON:0002020!2.08e-17!34;UBERON:0002346!4.94e-17!71;UBERON:0003075!4.94e-17!71;UBERON:0007284!4.94e-17!71;UBERON:0002616!9.22e-17!49;UBERON:0002791!1.04e-14!29;UBERON:0003528!1.04e-14!29;UBERON:0001893!1.04e-14!29;UBERON:0003056!4.38e-14!49;UBERON:0003080!5.19e-12!40;UBERON:0000956!9.98e-12!21;UBERON:0001869!9.98e-12!21;UBERON:0000203!9.98e-12!21;UBERON:0002780!2.26e-11!39;UBERON:0001890!2.26e-11!39;UBERON:0006240!2.26e-11!39;UBERON:0002619!1.23e-09!17;UBERON:0007811!2.25e-08!86;UBERON:0000153!9.15e-08!94;UBERON:0003076!3.20e-07!12;UBERON:0003057!3.20e-07!12;UBERON:0002021!3.21e-07!10;UBERON:0000411!3.21e-07!10;UBERON:0001950!3.21e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.84e-26,95;UBERON:0000924,6.84e-26,95;UBERON:0006601,6.84e-26,95;UBERON:0001016,2.33e-25,75;UBERON:0001017,8.86e-25,73;UBERON:0000073,1.72e-24,54;UBERON:0002346,6.75e-24,64;UBERON:0003075,6.75e-24,64;UBERON:0007284,6.75e-24,64;UBERON:0001049,1.04e-22,52;UBERON:0005068,1.04e-22,52;UBERON:0006241,1.04e-22,52;UBERON:0007135,1.04e-22,52;UBERON:0010371,3.17e-22,73;UBERON:0002020,2.34e-21,34;UBERON:0000955,2.47e-19,47;UBERON:0006238,2.47e-19,47;UBERON:0002616,1.89e-18,46;UBERON:0003528,6.76e-18,29;UBERON:0002791,6.76e-18,29;UBERON:0001893,6.76e-18,29;UBERON:0003056,2.17e-16,49;UBERON:0003080,7.35e-15,40;UBERON:0000956,1.30e-14,21;UBERON:0001869,1.30e-14,21;UBERON:0000203,1.30e-14,21;UBERON:0002780,4.83e-14,39;UBERON:0001890,4.83e-14,39;UBERON:0006240,4.83e-14,39;UBERON:0010314,6.14e-12,92;UBERON:0002619,6.28e-12,17;UBERON:0003076,7.82e-09,12;UBERON:0003057,7.82e-09,12;UBERON:0002021,7.86e-09,10;UBERON:0000411,7.86e-09,10;UBERON:0001950,7.86e-09,10 | |||
|phase1_expression=0.480446541314382,1.74487703819681,2.72999543633722,0,0,1.51091344720701,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0.666219523631325,1.01237633694913,0.699561878128147,5.36285681109004,4.9361196098066,3.39511721438424,6.63337663178344,0,0,4.31979541542198,3.44113921600755,2.8711598205751,2.58457197695445,4.30942465371778,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,3.12956537739216,1.74420125104357,7.90870257844099,4.08302788055995,0.979904951377538,0,6.37573903019398,0,0,0.514518872071894,0.85960031981627,0,4.04632921719196,4.7609188134483,3.80298842103708,1.0165335962074,0.889294796111139,14.3983954765024,15.8218618010716,12.7886420690298,2.09720077362883,1.53687322128622,4.76972216618997,9.18040380655497,5.8890989178387,10.5690864229407,9.718215801871,3.91970557487853,3.25874601462004,4.5960939330501,23.1243350098716,25.6651549551227,21.8121277223866,1.97829431595291,1.73826522844578,0.52091337055676,36.0146068711781,12.9435400307286,17.2662019987795,11.1958862479994,8.25755748634797,7.64237727883732,1.06016670666458,2.94729084416464,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0.519572009205738,0,1.12674735821344,0,0,0,0,0,0,1.02765491747154,4.14300613835475,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,0.578397427679647,1.76922110389975,0.808834249737046,0.883366073841574,1.45462575940567,0,9.9545470983926,5.44561437714983,0.766371165625774,0,0,0,36.0995440965623,11.4375150704657,11.5602003943835,45.3681475701842,27.872984849006,14.7529511637288,12.8170597823529,0.407357455401265,0.746441823660558,0.505445516867349,3.36706969418358,0.650602214813519,0.919608417733892,1.80062129805349,1.80845781402858,1.63287597963187,3.97152532883034,4.49768277886698,5.17406741478031,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,2.05782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0.540186184383045,1.42046841351126,0.787056926989615,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,24.1833440848746,1.3377599609307,0,0.793351699990633,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.948339504765408,0.685491075658373,3.38123207019241,1.22190796707189,0.387904974335251,0.350679099451593,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,0.189491411770485,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.863424909329478,0,4.52373851817817,5.4390568381871,3.93411418415229,20.4193192265502,25.5275438080589,22.8562788854796,0,0,0,1.17131623288992,1.50796378412959,0.716906393857656,2.00518806674155,2.26461224631066,1.61924280669958,0.292255857911312,0.790575555893047,45.6276269318966,0.141940085208269,1.06839362200353,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,6.80879211507576,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.493647061806363,0,2.11204537257339,0.63549621259146,0.441056796109924,0.98931751764888,0.484393280087717,0.542816324353403,0.596861720015682,1.47726809770555,0,19.0988061070825,2.22132145037209,0.206386867963223,0.370389054739423,1.31857919903284,1.6403307326523,1.14389086603261,0,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,2.25477175473676,0.598066184175915,0.330916980914195,0.972255941720238,0.904118764344118,1.68956125490778,1.87771581833206,4.55715346953825,4.61381115473128,0.966336483304024,0.864090018773596,0.632022241256357,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0.192423683280659,0,1.58711268530648,0.665957860122194,1.61484941897056,1.17519231454855,0.19318959403219,3.19060208267009,0.549454872801795,0.428736758158132,2.00628841614145,9.03602948187307,12.4287813856938,6.87474616127276,10.8267504876523,15.7568979547248,16.6186657425734,14.1754725048679,25.2179873805563,20.3914084042892,28.9945774581019,0.518936737920883,1.59609949360412,0.682934423016537,1.45864030240976,1.88651846365184,0.919217542250071,1.33348036680969,1.03017528619447,0.320919209591815,2.27427490587418,1.2673964994512,1.69763707247469,2.24739617927718,1.21647789569252,1.7230640686684,0.952587382566147,1.0429589335037,1.35036454324594,1.64834360321323,0.588795680537589,1.02860775715625,1.4198064492747,1.43061713968393,0.872078499793971,1.03520318456864,1.77690676572521,1.09756783723664,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,1.57607171800902,0.409231043169689,1.70430525304563,0.578719832943424,1.74867404556562,1.16965804222704,1.718968432386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| |||
|short_description=p1@Stac2 | |||
}} |
Revision as of 21:46, 12 September 2013
Short description: | p1@Stac2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stac2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000017544, NM_146028, uc007lfl.1_5end |
EntrezGene: | Stac2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.30e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-13 | 23 |
ectodermal cell | 3.63e-12 | 44 |
neurectodermal cell | 3.63e-12 | 44 |
neural cell | 4.48e-12 | 43 |
neuron | 1.50e-10 | 33 |
neuronal stem cell | 1.50e-10 | 33 |
neuroblast | 1.50e-10 | 33 |
electrically signaling cell | 1.50e-10 | 33 |
electrically responsive cell | 1.82e-07 | 39 |
electrically active cell | 1.82e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.