FFCP PHASE1:Mm9::chr12:3109943..3109962,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=721|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:3109943..3109962,+|id=chr12:3109943..3109962,+|ontology_enrichment_celltype=CL:0000624!2.70e-20!8;CL:0000893!2.85e-20!6;CL:0002489!2.85e-20!6;CL:0000898!2.85e-20!6;CL:0000809!2.85e-20!6;CL:0000810!2.85e-20!6;CL:0000895!2.85e-20!6;CL:0000808!2.85e-20!6;CL:0000894!2.85e-20!6;CL:0000806!2.85e-20!6;CL:0000807!2.85e-20!6;CL:0000805!2.85e-20!6;CL:0002425!2.85e-20!6;CL:0002436!2.85e-20!6;CL:0002427!2.85e-20!6;CL:0002428!2.85e-20!6;CL:0002429!2.85e-20!6;CL:0002433!2.85e-20!6;CL:0002431!2.85e-20!6;CL:0002432!2.85e-20!6;CL:0002031!1.77e-18!25;CL:0000219!4.69e-18!54;CL:0000791!5.98e-18!9;CL:0000789!5.98e-18!9;CL:0002420!5.98e-18!9;CL:0002419!5.98e-18!9;CL:0000790!5.98e-18!9;CL:0002320!5.57e-17!46;CL:0000134!5.57e-17!46;CL:0000553!8.74e-16!6;CL:0000556!8.74e-16!6;CL:0000084!1.55e-14!11;CL:0000827!1.55e-14!11;CL:0000988!6.16e-14!32;CL:0002032!6.16e-14!32;CL:0000037!6.16e-14!32;CL:0000566!6.16e-14!32;CL:0000837!6.16e-14!32;CL:0000838!2.97e-13!12;CL:0000542!3.61e-12!13;CL:0000051!3.61e-12!13;CL:0000414!5.38e-12!11;CL:0000215!3.54e-11!3;CL:0000063!7.18e-11!66;CL:0000050!2.01e-10!9;CL:0000034!1.55e-09!97;CL:0000738!4.20e-09!17;CL:0002087!4.20e-09!17;CL:0000144!6.13e-09!121;CL:0000012!6.13e-09!121;CL:0000325!1.12e-07!2;CL:0000217!1.12e-07!2;CL:0000328!1.12e-07!2;CL:0002573!1.12e-07!2;CL:0002376!1.12e-07!2;CL:0000218!1.12e-07!2;CL:0000692!1.12e-07!2;CL:0002377!1.12e-07!2;CL:0002375!1.12e-07!2;CL:0000548!1.61e-07!115;CL:0000004!1.61e-07!115;CL:0000255!1.61e-07!115;CL:0002371!3.12e-07!118;CL:0000839!4.13e-07!13;CL:0000723!5.16e-07!91;CL:0000048!5.16e-07!91|ontology_enrichment_celltype_v019_2=CL:0000553,2.39e-31,6;CL:0000556,2.39e-31,6;CL:0000050,5.93e-21,9;CL:0002320,2.00e-18,46;CL:0000134,2.00e-18,46;CL:0002031,3.29e-18,25;CL:0000219,1.44e-15,54;CL:0000839,1.56e-14,13;CL:0000988,4.16e-14,32;CL:0002032,4.16e-14,32;CL:0000037,4.16e-14,32;CL:0000837,4.16e-14,32;CL:0000763,8.18e-12,16;CL:0002027,2.91e-11,3;CL:0002006,2.91e-11,3;CL:0002024,2.91e-11,3;CL:0000893,3.58e-11,6;CL:0002489,3.58e-11,6;CL:0000898,3.58e-11,6;CL:0000809,3.58e-11,6;CL:0000810,3.58e-11,6;CL:0000895,3.58e-11,6;CL:0000808,3.58e-11,6;CL:0000894,3.58e-11,6;CL:0000806,3.58e-11,6;CL:0000807,3.58e-11,6;CL:0000805,3.58e-11,6;CL:0002425,3.58e-11,6;CL:0002436,3.58e-11,6;CL:0002427,3.58e-11,6;CL:0002428,3.58e-11,6;CL:0002429,3.58e-11,6;CL:0002433,3.58e-11,6;CL:0002431,3.58e-11,6;CL:0002432,3.58e-11,6;CL:0000049,6.01e-10,19;CL:0000213,6.23e-09,1;CL:0002078,6.23e-09,1;CL:0000115,6.23e-09,1;CL:0002262,6.23e-09,1;CL:1000398,6.23e-09,1;CL:0000723,7.58e-09,91;CL:0000048,7.58e-09,91;CL:0000624,1.59e-08,8;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1;CL:0000034,3.11e-08,97;CL:0000791,1.22e-07,9;CL:0000789,1.22e-07,9;CL:0002420,1.22e-07,9;CL:0002419,1.22e-07,9;CL:0000790,1.22e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.57e-17!46;UBERON:0002390!1.02e-07!45;UBERON:0003061!1.02e-07!45;UBERON:0002193!4.12e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-18,46;UBERON:0002371,8.18e-12,16;UBERON:0002390,7.43e-10,45;UBERON:0003061,7.43e-10,45;UBERON:0002193,3.37e-09,48;UBERON:0002405,3.37e-09,48;UBERON:0002394,6.23e-09,1;UBERON:0001281,6.23e-09,1;UBERON:0000353,6.23e-09,1;UBERON:0003497,6.23e-09,1;UBERON:0003909,6.23e-09,1;UBERON:0003928,6.23e-09,1;UBERON:0003835,6.23e-09,1;UBERON:0003513,6.23e-09,1;UBERON:0001280,6.23e-09,1;UBERON:0004647,6.23e-09,1;UBERON:0002294,6.23e-09,1;UBERON:0001173,6.23e-09,1;UBERON:0004912,6.23e-09,1;UBERON:0005171,6.23e-09,1;UBERON:0001474,1.38e-08,22;UBERON:0004765,1.38e-08,22;UBERON:0001434,1.38e-08,22|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,1.63845168425395,1.19852577757853,1.11681022593471,0.856003649656029,0.262261207256992,0,18.2227740650843,15.3903613188192,3.15462165358238,3.29074640653773,5.09267582157636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.604572480854284,5.50742528533188,1.72084775396277,0,0,0,0,0,0,0.779358013808606,2.82671659608272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,3.60891682921744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:3109943..3109962,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=721 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:3109943..3109962,+ | |||
|id=chr12:3109943..3109962,+ | |||
|ontology_enrichment_celltype=CL:0000624!2.70e-20!8;CL:0000893!2.85e-20!6;CL:0002489!2.85e-20!6;CL:0000898!2.85e-20!6;CL:0000809!2.85e-20!6;CL:0000810!2.85e-20!6;CL:0000895!2.85e-20!6;CL:0000808!2.85e-20!6;CL:0000894!2.85e-20!6;CL:0000806!2.85e-20!6;CL:0000807!2.85e-20!6;CL:0000805!2.85e-20!6;CL:0002425!2.85e-20!6;CL:0002436!2.85e-20!6;CL:0002427!2.85e-20!6;CL:0002428!2.85e-20!6;CL:0002429!2.85e-20!6;CL:0002433!2.85e-20!6;CL:0002431!2.85e-20!6;CL:0002432!2.85e-20!6;CL:0002031!1.77e-18!25;CL:0000219!4.69e-18!54;CL:0000791!5.98e-18!9;CL:0000789!5.98e-18!9;CL:0002420!5.98e-18!9;CL:0002419!5.98e-18!9;CL:0000790!5.98e-18!9;CL:0002320!5.57e-17!46;CL:0000134!5.57e-17!46;CL:0000553!8.74e-16!6;CL:0000556!8.74e-16!6;CL:0000084!1.55e-14!11;CL:0000827!1.55e-14!11;CL:0000988!6.16e-14!32;CL:0002032!6.16e-14!32;CL:0000037!6.16e-14!32;CL:0000566!6.16e-14!32;CL:0000837!6.16e-14!32;CL:0000838!2.97e-13!12;CL:0000542!3.61e-12!13;CL:0000051!3.61e-12!13;CL:0000414!5.38e-12!11;CL:0000215!3.54e-11!3;CL:0000063!7.18e-11!66;CL:0000050!2.01e-10!9;CL:0000034!1.55e-09!97;CL:0000738!4.20e-09!17;CL:0002087!4.20e-09!17;CL:0000144!6.13e-09!121;CL:0000012!6.13e-09!121;CL:0000325!1.12e-07!2;CL:0000217!1.12e-07!2;CL:0000328!1.12e-07!2;CL:0002573!1.12e-07!2;CL:0002376!1.12e-07!2;CL:0000218!1.12e-07!2;CL:0000692!1.12e-07!2;CL:0002377!1.12e-07!2;CL:0002375!1.12e-07!2;CL:0000548!1.61e-07!115;CL:0000004!1.61e-07!115;CL:0000255!1.61e-07!115;CL:0002371!3.12e-07!118;CL:0000839!4.13e-07!13;CL:0000723!5.16e-07!91;CL:0000048!5.16e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.39e-31,6;CL:0000556,2.39e-31,6;CL:0000050,5.93e-21,9;CL:0002320,2.00e-18,46;CL:0000134,2.00e-18,46;CL:0002031,3.29e-18,25;CL:0000219,1.44e-15,54;CL:0000839,1.56e-14,13;CL:0000988,4.16e-14,32;CL:0002032,4.16e-14,32;CL:0000037,4.16e-14,32;CL:0000837,4.16e-14,32;CL:0000763,8.18e-12,16;CL:0002027,2.91e-11,3;CL:0002006,2.91e-11,3;CL:0002024,2.91e-11,3;CL:0000893,3.58e-11,6;CL:0002489,3.58e-11,6;CL:0000898,3.58e-11,6;CL:0000809,3.58e-11,6;CL:0000810,3.58e-11,6;CL:0000895,3.58e-11,6;CL:0000808,3.58e-11,6;CL:0000894,3.58e-11,6;CL:0000806,3.58e-11,6;CL:0000807,3.58e-11,6;CL:0000805,3.58e-11,6;CL:0002425,3.58e-11,6;CL:0002436,3.58e-11,6;CL:0002427,3.58e-11,6;CL:0002428,3.58e-11,6;CL:0002429,3.58e-11,6;CL:0002433,3.58e-11,6;CL:0002431,3.58e-11,6;CL:0002432,3.58e-11,6;CL:0000049,6.01e-10,19;CL:0000213,6.23e-09,1;CL:0002078,6.23e-09,1;CL:0000115,6.23e-09,1;CL:0002262,6.23e-09,1;CL:1000398,6.23e-09,1;CL:0000723,7.58e-09,91;CL:0000048,7.58e-09,91;CL:0000624,1.59e-08,8;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1;CL:0000034,3.11e-08,97;CL:0000791,1.22e-07,9;CL:0000789,1.22e-07,9;CL:0002420,1.22e-07,9;CL:0002419,1.22e-07,9;CL:0000790,1.22e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.57e-17!46;UBERON:0002390!1.02e-07!45;UBERON:0003061!1.02e-07!45;UBERON:0002193!4.12e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-18,46;UBERON:0002371,8.18e-12,16;UBERON:0002390,7.43e-10,45;UBERON:0003061,7.43e-10,45;UBERON:0002193,3.37e-09,48;UBERON:0002405,3.37e-09,48;UBERON:0002394,6.23e-09,1;UBERON:0001281,6.23e-09,1;UBERON:0000353,6.23e-09,1;UBERON:0003497,6.23e-09,1;UBERON:0003909,6.23e-09,1;UBERON:0003928,6.23e-09,1;UBERON:0003835,6.23e-09,1;UBERON:0003513,6.23e-09,1;UBERON:0001280,6.23e-09,1;UBERON:0004647,6.23e-09,1;UBERON:0002294,6.23e-09,1;UBERON:0001173,6.23e-09,1;UBERON:0004912,6.23e-09,1;UBERON:0005171,6.23e-09,1;UBERON:0001474,1.38e-08,22;UBERON:0004765,1.38e-08,22;UBERON:0001434,1.38e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,1.63845168425395,1.19852577757853,1.11681022593471,0.856003649656029,0.262261207256992,0,18.2227740650843,15.3903613188192,3.15462165358238,3.29074640653773,5.09267582157636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.604572480854284,5.50742528533188,1.72084775396277,0,0,0,0,0,0,0.779358013808606,2.82671659608272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,3.60891682921744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:3109943..3109962,+ | |||
}} |
Revision as of 22:41, 12 September 2013
Short description: | p@chr12:3109943..3109962, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:3109943..3109962, + |
Coexpression cluster: | MCL_coexpression_mm9:721 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.00e-18 | 46 |
bone marrow | 8.18e-12 | 16 |
hematopoietic system | 7.43e-10 | 45 |
blood island | 7.43e-10 | 45 |
hemolymphoid system | 3.37e-09 | 48 |
immune system | 3.37e-09 | 48 |
bile duct | 6.23e-09 | 1 |
hepatic sinusoid | 6.23e-09 | 1 |
parenchyma | 6.23e-09 | 1 |
abdomen blood vessel | 6.23e-09 | 1 |
sinusoid | 6.23e-09 | 1 |
digestive system duct | 6.23e-09 | 1 |
abdominal segment blood vessel | 6.23e-09 | 1 |
trunk blood vessel | 6.23e-09 | 1 |
liver parenchyma | 6.23e-09 | 1 |
liver lobule | 6.23e-09 | 1 |
biliary system | 6.23e-09 | 1 |
biliary tree | 6.23e-09 | 1 |
biliary bud | 6.23e-09 | 1 |
hepatic duct | 6.23e-09 | 1 |
bone element | 1.38e-08 | 22 |
skeletal element | 1.38e-08 | 22 |
skeletal system | 1.38e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.