FFCP PHASE1:Hg19::chr3:77185657..77185661,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2543|description=CAGE_peak_at_chr3:77185657..77185661,+|id=chr3:77185657..77185661,+|ontology_enrichment_celltype=CL:0000047!1.63e-09!8;CL:0002319!5.77e-07!25;CL:0000540!9.04e-07!6;CL:0000031!9.04e-07!6;CL:0000404!9.04e-07!6|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!2.02e-09!10|ontology_enrichment_disease_v019=DOID:8552;1.61e-09;1|ontology_enrichment_disease_v019_2=DOID:8552,1.91e-09,1|ontology_enrichment_uberon=UBERON:0001017!1.23e-37!82;UBERON:0005743!8.37e-37!86;UBERON:0000073!1.70e-36!94;UBERON:0001016!1.70e-36!94;UBERON:0001049!1.12e-33!57;UBERON:0005068!1.12e-33!57;UBERON:0006241!1.12e-33!57;UBERON:0007135!1.12e-33!57;UBERON:0002780!3.23e-33!41;UBERON:0001890!3.23e-33!41;UBERON:0006240!3.23e-33!41;UBERON:0003080!3.41e-32!42;UBERON:0002616!3.30e-28!59;UBERON:0002346!2.41e-27!90;UBERON:0000955!1.26e-26!69;UBERON:0006238!1.26e-26!69;UBERON:0000924!4.46e-24!173;UBERON:0006601!4.46e-24!173;UBERON:0001893!6.81e-24!34;UBERON:0001869!7.67e-24!32;UBERON:0003075!3.76e-23!86;UBERON:0007284!3.76e-23!86;UBERON:0002791!8.15e-23!33;UBERON:0003056!4.56e-22!61;UBERON:0004121!8.57e-21!169;UBERON:0002020!3.64e-20!34;UBERON:0003528!3.64e-20!34;UBERON:0000956!9.36e-20!25;UBERON:0000203!9.36e-20!25;UBERON:0000153!1.41e-17!129;UBERON:0007811!1.41e-17!129;UBERON:0000033!3.53e-17!123;UBERON:0002619!1.27e-16!22;UBERON:0001950!2.80e-16!20;UBERON:0001894!1.39e-11!7;UBERON:0006222!1.39e-11!7;UBERON:0007023!2.06e-08!115;UBERON:0001872!2.88e-08!5;UBERON:0003296!9.35e-08!4;UBERON:0010133!9.35e-08!4;UBERON:0001871!7.95e-07!7|ontology_enrichment_uberon_v019=UBERON:0001905;1.80e-18;2!UBERON:0002757;1.80e-18;2!UBERON:0010134;1.80e-18;2!UBERON:0005408;1.80e-18;2!UBERON:0001899;1.80e-18;2!UBERON:0000922;4.23e-13;49!UBERON:0001950;5.59e-10;20!UBERON:0003296;1.08e-09;4!UBERON:0010133;1.08e-09;4!UBERON:0002784;1.08e-09;4!UBERON:0007029;1.61e-09;1!UBERON:0002619;4.28e-09;22!UBERON:0000956;5.05e-08;25!UBERON:0000203;5.05e-08;25!UBERON:0002780;6.37e-08;41!UBERON:0001890;6.37e-08;41!UBERON:0002021;1.13e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.89e-18,2;UBERON:0002757,1.89e-18,2;UBERON:0010134,1.89e-18,2;UBERON:0005408,1.89e-18,2;UBERON:0001899,1.89e-18,2;UBERON:0001017,1.95e-10,81;UBERON:0001950,6.15e-10,20;UBERON:0007029,1.06e-09,1;UBERON:0003296,1.10e-09,4;UBERON:0010133,1.10e-09,4;UBERON:0002784,1.10e-09,4;UBERON:0001016,3.08e-09,89;UBERON:0002780,3.52e-09,41;UBERON:0001890,3.52e-09,41;UBERON:0003080,3.52e-09,41;UBERON:0006240,3.52e-09,41;UBERON:0002619,4.67e-09,22;UBERON:0001049,1.85e-08,56;UBERON:0005068,1.85e-08,56;UBERON:0006241,1.85e-08,56;UBERON:0007135,1.85e-08,56;UBERON:0000956,5.45e-08,25;UBERON:0000203,5.45e-08,25;UBERON:0002021,1.36e-07,5;UBERON:0000073,5.80e-07,53;UBERON:0002616,5.80e-07,53|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.61246251376468,0,0,0,0,0,0,0.336672227908132,0.750711119231785,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0.689486746482929,2.04123229368278,0,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,1.16348177330109,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0,3.62972148145992,3.67287313956588,0.063186579628488,0.150323419414493,0.103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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2543 | |||
|description=CAGE_peak_at_chr3:77185657..77185661,+ | |||
|id=chr3:77185657..77185661,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.63e-09!8;CL:0002319!5.77e-07!25;CL:0000540!9.04e-07!6;CL:0000031!9.04e-07!6;CL:0000404!9.04e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.02e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:8552;1.61e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-37!82;UBERON:0005743!8.37e-37!86;UBERON:0000073!1.70e-36!94;UBERON:0001016!1.70e-36!94;UBERON:0001049!1.12e-33!57;UBERON:0005068!1.12e-33!57;UBERON:0006241!1.12e-33!57;UBERON:0007135!1.12e-33!57;UBERON:0002780!3.23e-33!41;UBERON:0001890!3.23e-33!41;UBERON:0006240!3.23e-33!41;UBERON:0003080!3.41e-32!42;UBERON:0002616!3.30e-28!59;UBERON:0002346!2.41e-27!90;UBERON:0000955!1.26e-26!69;UBERON:0006238!1.26e-26!69;UBERON:0000924!4.46e-24!173;UBERON:0006601!4.46e-24!173;UBERON:0001893!6.81e-24!34;UBERON:0001869!7.67e-24!32;UBERON:0003075!3.76e-23!86;UBERON:0007284!3.76e-23!86;UBERON:0002791!8.15e-23!33;UBERON:0003056!4.56e-22!61;UBERON:0004121!8.57e-21!169;UBERON:0002020!3.64e-20!34;UBERON:0003528!3.64e-20!34;UBERON:0000956!9.36e-20!25;UBERON:0000203!9.36e-20!25;UBERON:0000153!1.41e-17!129;UBERON:0007811!1.41e-17!129;UBERON:0000033!3.53e-17!123;UBERON:0002619!1.27e-16!22;UBERON:0001950!2.80e-16!20;UBERON:0001894!1.39e-11!7;UBERON:0006222!1.39e-11!7;UBERON:0007023!2.06e-08!115;UBERON:0001872!2.88e-08!5;UBERON:0003296!9.35e-08!4;UBERON:0010133!9.35e-08!4;UBERON:0001871!7.95e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.80e-18;2!UBERON:0002757;1.80e-18;2!UBERON:0010134;1.80e-18;2!UBERON:0005408;1.80e-18;2!UBERON:0001899;1.80e-18;2!UBERON:0000922;4.23e-13;49!UBERON:0001950;5.59e-10;20!UBERON:0003296;1.08e-09;4!UBERON:0010133;1.08e-09;4!UBERON:0002784;1.08e-09;4!UBERON:0007029;1.61e-09;1!UBERON:0002619;4.28e-09;22!UBERON:0000956;5.05e-08;25!UBERON:0000203;5.05e-08;25!UBERON:0002780;6.37e-08;41!UBERON:0001890;6.37e-08;41!UBERON:0002021;1.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.89e-18,2;UBERON:0002757,1.89e-18,2;UBERON:0010134,1.89e-18,2;UBERON:0005408,1.89e-18,2;UBERON:0001899,1.89e-18,2;UBERON:0001017,1.95e-10,81;UBERON:0001950,6.15e-10,20;UBERON:0007029,1.06e-09,1;UBERON:0003296,1.10e-09,4;UBERON:0010133,1.10e-09,4;UBERON:0002784,1.10e-09,4;UBERON:0001016,3.08e-09,89;UBERON:0002780,3.52e-09,41;UBERON:0001890,3.52e-09,41;UBERON:0003080,3.52e-09,41;UBERON:0006240,3.52e-09,41;UBERON:0002619,4.67e-09,22;UBERON:0001049,1.85e-08,56;UBERON:0005068,1.85e-08,56;UBERON:0006241,1.85e-08,56;UBERON:0007135,1.85e-08,56;UBERON:0000956,5.45e-08,25;UBERON:0000203,5.45e-08,25;UBERON:0002021,1.36e-07,5;UBERON:0000073,5.80e-07,53;UBERON:0002616,5.80e-07,53 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.61246251376468,0,0,0,0,0,0,0.336672227908132,0.750711119231785,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0.689486746482929,2.04123229368278,0,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,1.16348177330109,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0,3.62972148145992,3.67287313956588,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,1.12990370390266,0.137041924646751,0,0.379864775735272,0,0,0,0,0,7.67395194311635,1.71594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.182248669974074,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.248385611765534,0,0.124980407962107,0,0.285465333544967,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0.327628914576042,0.848662649770126,0.637724760305049,2.23084375666204,0,0,0,0,0.705351887381368,0.3062454773532,0.321146125482298,0,0.159633859057151,1.02558182120378,5.79764901309952,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.826747186004736,0.126831620387814,3.82882366312754,0,0,0.175871244359621,0.127762427639595,9.64263304580916,5.71682327772001,0.606965604236632,0.227662191351298,0,0.115233987555779,0,0.271878931907327,0.0657727735628491,0,0,0,0.314231179832004,0,3.65263488203798,0,0,0.214429632529969,0.316027223465453,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0,0,0,0,0,1.94284397223656,0,0,0.594600453887843,0,1.53916723443601,0,0,0.655678681511872,0.470317296361523,0,0.235676547101626,0,0.297046400327086,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.473314686579554,0,4.36350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0.179650404213174,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr3:77185657..77185661,+ | |||
}} |
Revision as of 01:25, 13 September 2013
Short description: | p@chr3:77185657..77185661, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:77185657..77185661, + |
Coexpression cluster: | C2543_pineal_parietal_occipital_temporal_hippocampus_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.89e-18 | 2 |
regional part of epithalamus | 1.89e-18 | 2 |
secretory circumventricular organ | 1.89e-18 | 2 |
circumventricular organ | 1.89e-18 | 2 |
epithalamus | 1.89e-18 | 2 |
central nervous system | 1.95e-10 | 81 |
neocortex | 6.15e-10 | 20 |
surface | 1.06e-09 | 1 |
gland of diencephalon | 1.10e-09 | 4 |
neuroendocrine gland | 1.10e-09 | 4 |
regional part of diencephalon | 1.10e-09 | 4 |
nervous system | 3.08e-09 | 89 |
regional part of forebrain | 3.52e-09 | 41 |
forebrain | 3.52e-09 | 41 |
anterior neural tube | 3.52e-09 | 41 |
future forebrain | 3.52e-09 | 41 |
regional part of cerebral cortex | 4.67e-09 | 22 |
neural tube | 1.85e-08 | 56 |
neural rod | 1.85e-08 | 56 |
future spinal cord | 1.85e-08 | 56 |
neural keel | 1.85e-08 | 56 |
cerebral cortex | 5.45e-08 | 25 |
pallium | 5.45e-08 | 25 |
occipital lobe | 1.36e-07 | 5 |
regional part of nervous system | 5.80e-07 | 53 |
regional part of brain | 5.80e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.91e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.