FFCP PHASE1:Hg19::chr4:145567538..145567544,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64399|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14866|TSSclassifier=S|UniProt=|association_with_transcript=214bp_to_ENST00000434550_5end|coexpression_cluster_id=C606|description=CAGE_peak_13_at_HHIP_5end|id=chr4:145567538..145567544,+|ontology_enrichment_celltype=CL:0002139!5.87e-29!24;CL:0000071!2.96e-23!18;CL:0002546!2.96e-23!18;CL:0000115!1.40e-19!35;CL:0002078!5.78e-17!44;CL:1000413!2.92e-16!9;CL:0000222!4.88e-16!119;CL:0000213!2.26e-11!57;CL:0000215!2.26e-11!57;CL:0002544!3.09e-11!6;CL:0000359!1.27e-10!32;CL:0002494!1.04e-08!16;CL:0000220!2.17e-07!246;CL:0005020!2.67e-07!6;CL:0002138!2.67e-07!6;CL:0005022!2.67e-07!6;CL:0002321!3.20e-07!248;CL:0002594!3.38e-07!4;CL:0000192!4.97e-07!42;CL:0000514!4.97e-07!42|ontology_enrichment_celltype_v019=CL:0000071;5.16e-35;18!CL:1000413;3.51e-32;9!CL:0002139;5.97e-32;24!CL:0000115;4.07e-20;36!CL:0000359;4.86e-18;32!CL:0002545;1.16e-17;2!CL:0002544;7.49e-13;6!CL:0000192;6.22e-12;43!CL:0002592;8.82e-12;3!CL:0002078;3.61e-11;45!CL:1000306;5.51e-09;4!CL:0002547;5.51e-09;4!CL:0000076;7.09e-08;63!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002595;2.36e-07;5|ontology_enrichment_celltype_v019_2=CL:0000071,7.44e-35,18;CL:0002546,7.44e-35,18;CL:1000413,5.73e-32,9;CL:0002139,1.02e-31,24;CL:0000115,1.23e-20,36;CL:0000222,1.65e-20,121;CL:0000359,7.17e-19,32;CL:0002545,1.07e-17,2;CL:0002078,3.39e-16,45;CL:0000192,1.04e-13,43;CL:0000514,1.04e-13,43;CL:0002544,9.16e-13,6;CL:0000213,3.26e-12,58;CL:0000215,3.26e-12,58;CL:0002592,7.11e-12,3;CL:0000187,1.98e-10,55;CL:0000680,8.01e-10,58;CL:0000056,8.01e-10,58;CL:0000355,8.01e-10,58;CL:0000393,2.83e-09,61;CL:0000211,2.83e-09,61;CL:1000306,4.51e-09,4;CL:0002547,4.51e-09,4;CL:0000076,5.04e-09,63;CL:0002321,4.41e-08,250;CL:0002595,2.28e-07,5|ontology_enrichment_development_v019=CL:0002546;5.16e-35;18!CL:0000514;6.22e-12;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;8.67e-10;1!DOID:4549;8.67e-10;1!DOID:5861;8.67e-10;1!DOID:6496;8.67e-10;1|ontology_enrichment_disease_v019_2=DOID:3371,8.68e-10,1;DOID:4549,8.68e-10,1;DOID:5861,8.68e-10,1;DOID:6496,8.68e-10,1|ontology_enrichment_uberon=UBERON:0002049!1.10e-34!79;UBERON:0007798!1.10e-34!79;UBERON:0000055!4.48e-33!69;UBERON:0004535!6.58e-31!110;UBERON:0001981!1.19e-29!60;UBERON:0007500!1.19e-29!60;UBERON:0004537!1.19e-29!60;UBERON:0006965!1.19e-29!60;UBERON:0001009!1.26e-29!113;UBERON:0001637!3.10e-29!42;UBERON:0003509!3.10e-29!42;UBERON:0004572!3.10e-29!42;UBERON:0004872!1.34e-28!84;UBERON:0003914!1.78e-26!118;UBERON:0000025!2.01e-26!194;UBERON:0004111!5.73e-25!241;UBERON:0000477!4.04e-24!286;UBERON:0001986!2.96e-23!18;UBERON:0004638!2.96e-23!18;UBERON:0004852!2.96e-23!18;UBERON:0004573!1.85e-19!33;UBERON:0004571!1.85e-19!33;UBERON:0000487!4.62e-18!22;UBERON:0000119!1.73e-17!312;UBERON:0006914!3.81e-17!25;UBERON:0000483!1.30e-16!309;UBERON:0003915!2.92e-16!9;UBERON:0004700!2.92e-16!9;UBERON:0001917!2.92e-16!9;UBERON:0000490!1.02e-11!138;UBERON:0000947!3.94e-10!21;UBERON:0010191!3.94e-10!21;UBERON:0003081!1.66e-07!216;UBERON:0000948!2.79e-07!24;UBERON:0005498!2.79e-07!24;UBERON:0004140!2.79e-07!24;UBERON:0009881!2.79e-07!24;UBERON:0004141!2.79e-07!24;UBERON:0003084!2.79e-07!24;UBERON:0007005!2.79e-07!24;UBERON:0004139!2.79e-07!24;UBERON:0004291!2.79e-07!24;UBERON:0001310!3.38e-07!4|ontology_enrichment_uberon_v019=UBERON:0001637;1.16e-44;42!UBERON:0003509;1.16e-44;42!UBERON:0004572;1.16e-44;42!UBERON:0004638;5.16e-35;18!UBERON:0001986;5.16e-35;18!UBERON:0004852;5.16e-35;18!UBERON:0004573;1.62e-33;33!UBERON:0004571;1.62e-33;33!UBERON:0003915;3.51e-32;9!UBERON:0004700;3.51e-32;9!UBERON:0001917;3.51e-32;9!UBERON:0007500;7.45e-31;56!UBERON:0001981;7.45e-31;56!UBERON:0004537;7.45e-31;56!UBERON:0000487;2.02e-28;22!UBERON:0006914;7.38e-25;25!UBERON:0000055;1.15e-24;65!UBERON:0003914;8.27e-21;74!UBERON:0002049;3.59e-18;75!UBERON:0007798;3.59e-18;75!UBERON:0000947;5.60e-18;21!UBERON:0010191;5.60e-18;21!UBERON:0005800;1.16e-17;2!UBERON:0001515;1.16e-17;2!UBERON:0000490;1.04e-16;33!UBERON:0003498;8.82e-12;3!UBERON:0005985;8.82e-12;3!UBERON:0001621;8.82e-12;3!UBERON:0000025;3.90e-11;93!UBERON:0001009;1.58e-09;112!UBERON:0002171;3.25e-09;1!UBERON:0006518;3.25e-09;1!UBERON:0008949;3.25e-09;1!UBERON:0000101;3.25e-09;1!UBERON:0002167;3.25e-09;1!UBERON:0004797;5.51e-09;4!UBERON:0000415;5.51e-09;4!UBERON:0007240;5.51e-09;4!UBERON:0005742;5.51e-09;4!UBERON:0005734;5.51e-09;4!UBERON:0004664;5.51e-09;4!UBERON:0004663;5.51e-09;4!UBERON:0004535;1.10e-08;109!UBERON:0004111;7.90e-08;130!UBERON:0003834;2.36e-07;5!UBERON:0001533;2.36e-07;5!UBERON:0000119;6.60e-07;139|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.23e-52,42;UBERON:0003509,4.23e-52,42;UBERON:0004572,4.23e-52,42;UBERON:0007500,7.65e-51,59;UBERON:0001981,7.65e-51,59;UBERON:0004537,7.65e-51,59;UBERON:0006965,7.65e-51,59;UBERON:0000055,2.84e-48,68;UBERON:0002049,1.19e-41,78;UBERON:0007798,1.19e-41,78;UBERON:0004872,5.78e-39,83;UBERON:0004573,8.71e-39,33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0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0.109940516745429,0,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p13@HHIP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14866 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=214bp_to_ENST00000434550_5end | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_13_at_HHIP_5end | |||
|id=chr4:145567538..145567544,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.87e-29!24;CL:0000071!2.96e-23!18;CL:0002546!2.96e-23!18;CL:0000115!1.40e-19!35;CL:0002078!5.78e-17!44;CL:1000413!2.92e-16!9;CL:0000222!4.88e-16!119;CL:0000213!2.26e-11!57;CL:0000215!2.26e-11!57;CL:0002544!3.09e-11!6;CL:0000359!1.27e-10!32;CL:0002494!1.04e-08!16;CL:0000220!2.17e-07!246;CL:0005020!2.67e-07!6;CL:0002138!2.67e-07!6;CL:0005022!2.67e-07!6;CL:0002321!3.20e-07!248;CL:0002594!3.38e-07!4;CL:0000192!4.97e-07!42;CL:0000514!4.97e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000071;5.16e-35;18!CL:1000413;3.51e-32;9!CL:0002139;5.97e-32;24!CL:0000115;4.07e-20;36!CL:0000359;4.86e-18;32!CL:0002545;1.16e-17;2!CL:0002544;7.49e-13;6!CL:0000192;6.22e-12;43!CL:0002592;8.82e-12;3!CL:0002078;3.61e-11;45!CL:1000306;5.51e-09;4!CL:0002547;5.51e-09;4!CL:0000076;7.09e-08;63!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002595;2.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,7.44e-35,18;CL:0002546,7.44e-35,18;CL:1000413,5.73e-32,9;CL:0002139,1.02e-31,24;CL:0000115,1.23e-20,36;CL:0000222,1.65e-20,121;CL:0000359,7.17e-19,32;CL:0002545,1.07e-17,2;CL:0002078,3.39e-16,45;CL:0000192,1.04e-13,43;CL:0000514,1.04e-13,43;CL:0002544,9.16e-13,6;CL:0000213,3.26e-12,58;CL:0000215,3.26e-12,58;CL:0002592,7.11e-12,3;CL:0000187,1.98e-10,55;CL:0000680,8.01e-10,58;CL:0000056,8.01e-10,58;CL:0000355,8.01e-10,58;CL:0000393,2.83e-09,61;CL:0000211,2.83e-09,61;CL:1000306,4.51e-09,4;CL:0002547,4.51e-09,4;CL:0000076,5.04e-09,63;CL:0002321,4.41e-08,250;CL:0002595,2.28e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;5.16e-35;18!CL:0000514;6.22e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.67e-10;1!DOID:4549;8.67e-10;1!DOID:5861;8.67e-10;1!DOID:6496;8.67e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.68e-10,1;DOID:4549,8.68e-10,1;DOID:5861,8.68e-10,1;DOID:6496,8.68e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;1.16e-44;42!UBERON:0003509;1.16e-44;42!UBERON:0004572;1.16e-44;42!UBERON:0004638;5.16e-35;18!UBERON:0001986;5.16e-35;18!UBERON:0004852;5.16e-35;18!UBERON:0004573;1.62e-33;33!UBERON:0004571;1.62e-33;33!UBERON:0003915;3.51e-32;9!UBERON:0004700;3.51e-32;9!UBERON:0001917;3.51e-32;9!UBERON:0007500;7.45e-31;56!UBERON:0001981;7.45e-31;56!UBERON:0004537;7.45e-31;56!UBERON:0000487;2.02e-28;22!UBERON:0006914;7.38e-25;25!UBERON:0000055;1.15e-24;65!UBERON:0003914;8.27e-21;74!UBERON:0002049;3.59e-18;75!UBERON:0007798;3.59e-18;75!UBERON:0000947;5.60e-18;21!UBERON:0010191;5.60e-18;21!UBERON:0005800;1.16e-17;2!UBERON:0001515;1.16e-17;2!UBERON:0000490;1.04e-16;33!UBERON:0003498;8.82e-12;3!UBERON:0005985;8.82e-12;3!UBERON:0001621;8.82e-12;3!UBERON:0000025;3.90e-11;93!UBERON:0001009;1.58e-09;112!UBERON:0002171;3.25e-09;1!UBERON:0006518;3.25e-09;1!UBERON:0008949;3.25e-09;1!UBERON:0000101;3.25e-09;1!UBERON:0002167;3.25e-09;1!UBERON:0004797;5.51e-09;4!UBERON:0000415;5.51e-09;4!UBERON:0007240;5.51e-09;4!UBERON:0005742;5.51e-09;4!UBERON:0005734;5.51e-09;4!UBERON:0004664;5.51e-09;4!UBERON:0004663;5.51e-09;4!UBERON:0004535;1.10e-08;109!UBERON:0004111;7.90e-08;130!UBERON:0003834;2.36e-07;5!UBERON:0001533;2.36e-07;5!UBERON:0000119;6.60e-07;139 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0.56530794192401,3.35599548967925,3.57653454522088,1.04497483268405,0.258416759169329,0,0.66944122552934,1.20848795132744,0.760272105718513,0.24406205754817,2.57364156242108,5.67099363517232,2.14319347881791,0.44905874525234,0.788280363383256,0,0,1.46561395144326,0,0,0,0,1.8994576749687,0.132409180813219,2.0078563452417,0,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.70445216541493,1.01056513432752,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,0,0.170093705276516,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0.924100740528266,1.59691809095107,0,1.11194531462352,0.715624433709956,0,0,0,0,0,0,1.56989728039846,0,0,0,1.61745985258653,3.17020642346017,0.421258456238981,0,0,0,0,0,0,0.551365343546124,1.32687795048244,2.19225442626881,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,4.58931858795801,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0.109940516745429,0,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@HHIP | |||
}} |
Revision as of 02:38, 13 September 2013
Short description: | p13@HHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_HHIP_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | 214bp_to_ENST00000434550_5end |
EntrezGene: | HHIP |
HGNC: | 14866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 7.44e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.44e-35 | 18 |
endothelial cell of artery | 5.73e-32 | 9 |
endothelial cell of vascular tree | 1.02e-31 | 24 |
endothelial cell | 1.23e-20 | 36 |
mesodermal cell | 1.65e-20 | 121 |
vascular associated smooth muscle cell | 7.17e-19 | 32 |
thoracic aorta endothelial cell | 1.07e-17 | 2 |
meso-epithelial cell | 3.39e-16 | 45 |
smooth muscle cell | 1.04e-13 | 43 |
smooth muscle myoblast | 1.04e-13 | 43 |
aortic endothelial cell | 9.16e-13 | 6 |
lining cell | 3.26e-12 | 58 |
barrier cell | 3.26e-12 | 58 |
smooth muscle cell of the coronary artery | 7.11e-12 | 3 |
muscle cell | 1.98e-10 | 55 |
muscle precursor cell | 8.01e-10 | 58 |
myoblast | 8.01e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-10 | 58 |
electrically responsive cell | 2.83e-09 | 61 |
electrically active cell | 2.83e-09 | 61 |
fibroblast of tunica adventitia of artery | 4.51e-09 | 4 |
fibroblast of the aortic adventitia | 4.51e-09 | 4 |
squamous epithelial cell | 5.04e-09 | 63 |
embryonic cell | 4.41e-08 | 250 |
smooth muscle cell of the subclavian artery | 2.28e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.68e-10 | 1 |
extraosseous chondrosarcoma | 8.68e-10 | 1 |
myxoid chondrosarcoma | 8.68e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 8.68e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.