FFCP PHASE1:Hg19::chr5:59064458..59064511,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5144|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8783|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000502575,ENST00000507116_5end|description=CAGE_peak_1_at_PDE4D_5end|id=chr5:59064458..59064511,-|ontology_enrichment_celltype=CL:0000236!2.77e-07!14;CL:0002139!7.10e-07!24|ontology_enrichment_celltype_v019=CL:0000236;2.80e-09;13!CL:0002139;1.51e-07;24|ontology_enrichment_celltype_v019_2=CL:0000236,3.80e-08,14;CL:0002139,1.04e-07,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.65e-14!115;UBERON:0001017!2.21e-10!82;UBERON:0005743!1.20e-09!86;UBERON:0000924!3.46e-09!173;UBERON:0006601!3.46e-09!173;UBERON:0000477!1.09e-08!286;UBERON:0004121!1.33e-08!169;UBERON:0000073!1.45e-08!94;UBERON:0001016!1.45e-08!94;UBERON:0000955!7.04e-08!69;UBERON:0006238!7.04e-08!69;UBERON:0002346!8.16e-08!90;UBERON:0001049!9.07e-08!57;UBERON:0005068!9.07e-08!57;UBERON:0006241!9.07e-08!57;UBERON:0007135!9.07e-08!57;UBERON:0002780!1.10e-07!41;UBERON:0001890!1.10e-07!41;UBERON:0006240!1.10e-07!41;UBERON:0002616!2.25e-07!59;UBERON:0003075!3.36e-07!86;UBERON:0007284!3.36e-07!86;UBERON:0000153!3.50e-07!129;UBERON:0007811!3.50e-07!129;UBERON:0003080!3.98e-07!42|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.66e-13,114;UBERON:0011216,5.46e-13,223;UBERON:0001017,1.01e-10,81;UBERON:0001016,2.59e-09,89;UBERON:0001049,2.93e-08,56;UBERON:0005068,2.93e-08,56;UBERON:0006241,2.93e-08,56;UBERON:0007135,2.93e-08,56;UBERON:0002780,2.98e-08,41;UBERON:0001890,2.98e-08,41;UBERON:0003080,2.98e-08,41;UBERON:0006240,2.98e-08,41;UBERON:0000955,3.44e-08,68;UBERON:0006238,3.44e-08,68;UBERON:0002346,1.50e-07,86;UBERON:0004121,1.91e-07,171;UBERON:0000924,1.91e-07,171;UBERON:0006601,1.91e-07,171;UBERON:0000073,2.12e-07,53;UBERON:0002616,2.12e-07,53;UBERON:0003075,2.42e-07,82;UBERON:0007284,2.42e-07,82;UBERON:0004921,3.56e-07,118;UBERON:0003056,6.57e-07,61|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.737201809504527,0,18.1306338868043,7.3854753903967,0.495065411840187,0,1.34465029290355,1.20538905604795,1.46062018077475,0,6.1560529038394,2.04000691244253,0.940364164434263,2.28988789704845,1.09499540058307,0.753255837568817,0.916960868975415,1.31360943119913,0.787107813136792,0,0,0.928896739896456,0,0,0.369754010166788,9.5284656713771,36.8218312142422,0.587200878669695,0,0.401088894940283,0.434021741431704,0.447830948479849,0.32389366601898,0.515151135268373,0.872389432677388,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.545812300115692,0.449446968890169,0.918251677112708,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,3.63239701580021,1.47311054395026,0,0,0,0,0,0,0,0,0,0,21.1195493353587,27.8530691743687,25.7957683620431,37.9789898084191,20.8205913258726,22.4153451582248,19.8313461835459,20.0351288452426,68.3055562931338,61.0726676945776,41.2855086375247,0,1.68152568894461,0.263384084775077,5.31116379307349,5.50215067848831,2.46721798799411,0.83593247695339,5.86660079940463,13.2565385605725,0,3.34231370655521,6.48132996444642,7.3106185212595,18.4146627360211,1.92136979588513,3.51160238411671,1.97325485524411,1.93445012450094,5.21645554323094,7.26604159494096,5.35081656179426,3.1360657141493,2.26618685395132,3.83220493601921,4.12352934579156,5.31341353240956,1.27426165729639,1.95325036156926,0,1.95747654801105,2.55973222308837,3.74792179657038,1.18388626022008,0,0,0,0,2.43806866313962,2.68280343881454,0.895037932904712,0,0,0.434539556882471,0,0,9.54801653357085,7.09534071880205,7.90513071238134,6.81091192588106,0,0.370784442784429,0.324547393654683,0,0,0,0,0.371457501329565,2.18638648103376,1.72046919021225,2.77712401286075,1.13061588384802,1.67799774483962,1.6507082516404,1.67195973229448,7.23566925674121,9.24992282985447,18.4096337020569,4.02829317109147,4.56163263431108,2.68468263302986,6.25027236587977,3.24056779152704,12.2340627749189,9.20570427767296,6.53146586803269,1.53316637465883,4.74632829784064,4.21364011039937,1.31780417436063,0,0,0,0.12663051166458,0.794455084879313,0.286836620748814,0,0,0,0.24666754841716,0.933633106199299,2.42479209725439,2.94231425604226,5.44886739521753,2.30470369792,0.234321431833797,0,2.2818872861778,0,0.469737994575059,0.647491777472526,0.421352420106746,1.22492502752936,0.491337269247072,1.23990937410919,0,0.247266929278557,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0.232387885739037,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,2.76269842704961,0.464367928031979,0.721879481669586,6.38856720215157,5.22612539242115,6.02527574708705,6.17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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000502575,ENST00000507116_5end | |||
|description=CAGE_peak_1_at_PDE4D_5end | |||
|id=chr5:59064458..59064511,- | |||
|ontology_enrichment_celltype=CL:0000236!2.77e-07!14;CL:0002139!7.10e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.80e-09;13!CL:0002139;1.51e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.80e-08,14;CL:0002139,1.04e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.65e-14!115;UBERON:0001017!2.21e-10!82;UBERON:0005743!1.20e-09!86;UBERON:0000924!3.46e-09!173;UBERON:0006601!3.46e-09!173;UBERON:0000477!1.09e-08!286;UBERON:0004121!1.33e-08!169;UBERON:0000073!1.45e-08!94;UBERON:0001016!1.45e-08!94;UBERON:0000955!7.04e-08!69;UBERON:0006238!7.04e-08!69;UBERON:0002346!8.16e-08!90;UBERON:0001049!9.07e-08!57;UBERON:0005068!9.07e-08!57;UBERON:0006241!9.07e-08!57;UBERON:0007135!9.07e-08!57;UBERON:0002780!1.10e-07!41;UBERON:0001890!1.10e-07!41;UBERON:0006240!1.10e-07!41;UBERON:0002616!2.25e-07!59;UBERON:0003075!3.36e-07!86;UBERON:0007284!3.36e-07!86;UBERON:0000153!3.50e-07!129;UBERON:0007811!3.50e-07!129;UBERON:0003080!3.98e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@PDE4D | |||
}} |
Revision as of 16:02, 13 September 2013
Short description: | p1@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502575, ENST00000507116_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.80e-08 | 14 |
endothelial cell of vascular tree | 1.04e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.66e-13 | 114 |
organ system subdivision | 5.46e-13 | 223 |
central nervous system | 1.01e-10 | 81 |
nervous system | 2.59e-09 | 89 |
neural tube | 2.93e-08 | 56 |
neural rod | 2.93e-08 | 56 |
future spinal cord | 2.93e-08 | 56 |
neural keel | 2.93e-08 | 56 |
regional part of forebrain | 2.98e-08 | 41 |
forebrain | 2.98e-08 | 41 |
anterior neural tube | 2.98e-08 | 41 |
future forebrain | 2.98e-08 | 41 |
brain | 3.44e-08 | 68 |
future brain | 3.44e-08 | 68 |
neurectoderm | 1.50e-07 | 86 |
ectoderm-derived structure | 1.91e-07 | 171 |
ectoderm | 1.91e-07 | 171 |
presumptive ectoderm | 1.91e-07 | 171 |
regional part of nervous system | 2.12e-07 | 53 |
regional part of brain | 2.12e-07 | 53 |
neural plate | 2.42e-07 | 82 |
presumptive neural plate | 2.42e-07 | 82 |
subdivision of digestive tract | 3.56e-07 | 118 |
pre-chordal neural plate | 6.57e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.