FFCP PHASE1:Mm9::chr18:36356997..36357057,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100042150|HGNC=|UniProt=D3YZR3,D3YZR2|association_with_transcript=0bp_to_ENSMUST00000115712,ENSMUST00000115713_5end|description=CAGE_peak_1_at_Nrg2_5end|id=chr18:36356997..36357057,-|ontology_enrichment_celltype=CL:0000117!8.13e-09!23;CL:0000337!8.13e-09!23;CL:0002319!2.81e-08!43;CL:0000221!3.81e-08!44;CL:0000133!3.81e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-09,23;CL:0000337,1.25e-09,23;CL:0002319,2.24e-08,43;CL:0000221,5.70e-08,44;CL:0000133,5.70e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.08e-19!73;UBERON:0005743!5.08e-19!73;UBERON:0000073!3.05e-18!75;UBERON:0001016!3.05e-18!75;UBERON:0001049!4.06e-16!52;UBERON:0005068!4.06e-16!52;UBERON:0006241!4.06e-16!52;UBERON:0007135!4.06e-16!52;UBERON:0002020!3.39e-15!34;UBERON:0000955!4.07e-15!50;UBERON:0006238!4.07e-15!50;UBERON:0000033!9.29e-15!63;UBERON:0002616!1.85e-14!49;UBERON:0004121!2.32e-14!102;UBERON:0000924!2.32e-14!102;UBERON:0006601!2.32e-14!102;UBERON:0002346!9.04e-14!71;UBERON:0003075!9.04e-14!71;UBERON:0007284!9.04e-14!71;UBERON:0002791!2.52e-12!29;UBERON:0003528!2.52e-12!29;UBERON:0001893!2.52e-12!29;UBERON:0003056!5.79e-11!49;UBERON:0003080!8.31e-11!40;UBERON:0002780!3.26e-10!39;UBERON:0001890!3.26e-10!39;UBERON:0006240!3.26e-10!39;UBERON:0002619!6.98e-09!17;UBERON:0000956!8.54e-09!21;UBERON:0001869!8.54e-09!21;UBERON:0000203!8.54e-09!21;UBERON:0007811!3.26e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-20,73;UBERON:0000073,9.63e-20,54;UBERON:0001016,1.32e-19,75;UBERON:0001049,3.37e-18,52;UBERON:0005068,3.37e-18,52;UBERON:0006241,3.37e-18,52;UBERON:0007135,3.37e-18,52;UBERON:0002020,5.23e-18,34;UBERON:0002346,8.88e-17,64;UBERON:0003075,8.88e-17,64;UBERON:0007284,8.88e-17,64;UBERON:0004121,1.12e-15,95;UBERON:0000924,1.12e-15,95;UBERON:0006601,1.12e-15,95;UBERON:0000955,7.84e-15,47;UBERON:0006238,7.84e-15,47;UBERON:0003528,3.30e-14,29;UBERON:0002791,3.30e-14,29;UBERON:0001893,3.30e-14,29;UBERON:0002616,5.05e-14,46;UBERON:0010371,1.33e-12,73;UBERON:0003080,5.90e-11,40;UBERON:0003056,1.46e-10,49;UBERON:0002619,1.47e-10,17;UBERON:0002780,3.16e-10,39;UBERON:0001890,3.16e-10,39;UBERON:0006240,3.16e-10,39;UBERON:0000956,1.57e-09,21;UBERON:0001869,1.57e-09,21;UBERON:0000203,1.57e-09,21;UBERON:0003076,8.22e-09,12;UBERON:0003057,8.22e-09,12;UBERON:0002021,2.63e-08,10;UBERON:0000411,2.63e-08,10;UBERON:0001950,2.63e-08,10;UBERON:0010314,3.07e-07,92|phase1_expression=0.160148847104794,0.697950815278722,1.81999695755814,0,0,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,2.63634199468316,0,0,0.639969691173627,0.91763712426868,2.29692785646008,2.58457197695445,2.80112602491656,0,0,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0.485510353031154,0.377690453926732,0.101376931219515,0,0,6.1047043786525,7.90870257844099,12.6379434398284,1.81982348112971,2.87505128729943,0.167782606057736,0,0.672187598284928,0.257259436035947,0,0,2.83243045203437,1.05798195854407,5.07065122804943,0.677689064138264,0,0,0,0,1.49800055259202,6.53171119046643,0.622137673850866,1.08004750665353,0.630974884054146,4.28476476605705,5.96345060569357,0.979926393719632,1.0543001812006,2.75765635983006,5.50579404996943,5.87361755191863,4.6081959976873,3.56092976871523,3.11057988248193,1.04182674111352,4.74611098302348,7.31591393041184,5.34793867218835,9.42811473515737,5.97961059356232,4.28718725398191,0.227178579999552,0.377857800533928,0,0,0,0,0,0,1.26399978118577,0,0,0,0.563373679106722,0,0,0,0,0,0,0.91347103775248,0.258937883647172,1.03909497345377,0.346970653532272,0,0.691846491768175,0.753613202763113,0.117588707135705,0.251333182659351,0.247194967734374,0.578397427679647,2.65383165584962,0.161766849947409,0.220841518460394,0,0,23.7152445579353,32.4642395560855,1.27728527604296,4.43315960671905,7.7987355029143,5.59108999121485,8.38827580667007,6.40500843946077,3.39266750704734,4.86708096538374,3.83573185995496,4.1557608911912,6.00292673350703,0.407357455401265,1.7416975885413,0,1.05220927943237,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,1.49680298132921,2.17793324484245,2.15513966487376,1.55222022443409,0.215567992932842,0,0,0,0,0.348252166522167,0,0.796137067273973,7.02213187313235,6.43369767786788,9.37739548005456,0.828503090142008,0.703578179943289,0,0,0.590292695242212,0.154267112887378,0.232533944750408,0,0.233530684734339,0.493679549740441,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,5.25724871410318,2.16099685996497,0.330418782983798,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.38992817423824,1.79763881730844,0,0.398282546508734,1.32767530667157,0.571242563048644,0,0.203651327845314,1.16371492300575,0.631222379012867,0.316182685621286,0.295220295959204,0.156998727841375,0.370191491765402,0,0.166845105716094,0.589676985339609,0.899448449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| ||
|EntrezGene=100042150 | |||
|HGNC= | |||
|UniProt=D3YZR3,D3YZR2 | |||
|association_with_transcript=0bp_to_ENSMUST00000115712,ENSMUST00000115713_5end | |||
|description=CAGE_peak_1_at_Nrg2_5end | |||
|id=chr18:36356997..36357057,- | |||
|ontology_enrichment_celltype=CL:0000117!8.13e-09!23;CL:0000337!8.13e-09!23;CL:0002319!2.81e-08!43;CL:0000221!3.81e-08!44;CL:0000133!3.81e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-09,23;CL:0000337,1.25e-09,23;CL:0002319,2.24e-08,43;CL:0000221,5.70e-08,44;CL:0000133,5.70e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.08e-19!73;UBERON:0005743!5.08e-19!73;UBERON:0000073!3.05e-18!75;UBERON:0001016!3.05e-18!75;UBERON:0001049!4.06e-16!52;UBERON:0005068!4.06e-16!52;UBERON:0006241!4.06e-16!52;UBERON:0007135!4.06e-16!52;UBERON:0002020!3.39e-15!34;UBERON:0000955!4.07e-15!50;UBERON:0006238!4.07e-15!50;UBERON:0000033!9.29e-15!63;UBERON:0002616!1.85e-14!49;UBERON:0004121!2.32e-14!102;UBERON:0000924!2.32e-14!102;UBERON:0006601!2.32e-14!102;UBERON:0002346!9.04e-14!71;UBERON:0003075!9.04e-14!71;UBERON:0007284!9.04e-14!71;UBERON:0002791!2.52e-12!29;UBERON:0003528!2.52e-12!29;UBERON:0001893!2.52e-12!29;UBERON:0003056!5.79e-11!49;UBERON:0003080!8.31e-11!40;UBERON:0002780!3.26e-10!39;UBERON:0001890!3.26e-10!39;UBERON:0006240!3.26e-10!39;UBERON:0002619!6.98e-09!17;UBERON:0000956!8.54e-09!21;UBERON:0001869!8.54e-09!21;UBERON:0000203!8.54e-09!21;UBERON:0007811!3.26e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-20,73;UBERON:0000073,9.63e-20,54;UBERON:0001016,1.32e-19,75;UBERON:0001049,3.37e-18,52;UBERON:0005068,3.37e-18,52;UBERON:0006241,3.37e-18,52;UBERON:0007135,3.37e-18,52;UBERON:0002020,5.23e-18,34;UBERON:0002346,8.88e-17,64;UBERON:0003075,8.88e-17,64;UBERON:0007284,8.88e-17,64;UBERON:0004121,1.12e-15,95;UBERON:0000924,1.12e-15,95;UBERON:0006601,1.12e-15,95;UBERON:0000955,7.84e-15,47;UBERON:0006238,7.84e-15,47;UBERON:0003528,3.30e-14,29;UBERON:0002791,3.30e-14,29;UBERON:0001893,3.30e-14,29;UBERON:0002616,5.05e-14,46;UBERON:0010371,1.33e-12,73;UBERON:0003080,5.90e-11,40;UBERON:0003056,1.46e-10,49;UBERON:0002619,1.47e-10,17;UBERON:0002780,3.16e-10,39;UBERON:0001890,3.16e-10,39;UBERON:0006240,3.16e-10,39;UBERON:0000956,1.57e-09,21;UBERON:0001869,1.57e-09,21;UBERON:0000203,1.57e-09,21;UBERON:0003076,8.22e-09,12;UBERON:0003057,8.22e-09,12;UBERON:0002021,2.63e-08,10;UBERON:0000411,2.63e-08,10;UBERON:0001950,2.63e-08,10;UBERON:0010314,3.07e-07,92 | |||
|phase1_expression=0.160148847104794,0.697950815278722,1.81999695755814,0,0,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,2.63634199468316,0,0,0.639969691173627,0.91763712426868,2.29692785646008,2.58457197695445,2.80112602491656,0,0,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0.485510353031154,0.377690453926732,0.101376931219515,0,0,6.1047043786525,7.90870257844099,12.6379434398284,1.81982348112971,2.87505128729943,0.167782606057736,0,0.672187598284928,0.257259436035947,0,0,2.83243045203437,1.05798195854407,5.07065122804943,0.677689064138264,0,0,0,0,1.49800055259202,6.53171119046643,0.622137673850866,1.08004750665353,0.630974884054146,4.28476476605705,5.96345060569357,0.979926393719632,1.0543001812006,2.75765635983006,5.50579404996943,5.87361755191863,4.6081959976873,3.56092976871523,3.11057988248193,1.04182674111352,4.74611098302348,7.31591393041184,5.34793867218835,9.42811473515737,5.97961059356232,4.28718725398191,0.227178579999552,0.377857800533928,0,0,0,0,0,0,1.26399978118577,0,0,0,0.563373679106722,0,0,0,0,0,0,0.91347103775248,0.258937883647172,1.03909497345377,0.346970653532272,0,0.691846491768175,0.753613202763113,0.117588707135705,0.251333182659351,0.247194967734374,0.578397427679647,2.65383165584962,0.161766849947409,0.220841518460394,0,0,23.7152445579353,32.4642395560855,1.27728527604296,4.43315960671905,7.7987355029143,5.59108999121485,8.38827580667007,6.40500843946077,3.39266750704734,4.86708096538374,3.83573185995496,4.1557608911912,6.00292673350703,0.407357455401265,1.7416975885413,0,1.05220927943237,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,1.49680298132921,2.17793324484245,2.15513966487376,1.55222022443409,0.215567992932842,0,0,0,0,0.348252166522167,0,0.796137067273973,7.02213187313235,6.43369767786788,9.37739548005456,0.828503090142008,0.703578179943289,0,0,0.590292695242212,0.154267112887378,0.232533944750408,0,0.233530684734339,0.493679549740441,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,5.25724871410318,2.16099685996497,0.330418782983798,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.38992817423824,1.79763881730844,0,0.398282546508734,1.32767530667157,0.571242563048644,0,0.203651327845314,1.16371492300575,0.631222379012867,0.316182685621286,0.295220295959204,0.156998727841375,0.370191491765402,0,0.166845105716094,0.589676985339609,0.899448449539415,0.405720242777006,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,2.87536413054709,0,0.624075346229121,0,0,0,4.24932337383191,1.89491411770485,0.977789858652155,0.848725428875941,1.17345124144251,0.502518772325447,0.714130922658041,0.195133647857799,0.472905432318573,0.8858587585951,0.956728611944923,2.13022309130459,2.24490476425664,5.93061140184197,1.50791283939272,0,0,0.551873492609465,6.10092241953609,5.15731421005694,0,0,0,1.56175497718655,0.861693590931196,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,1.75353514746787,0.790575555893047,10.9249247583414,1.84522110770749,0.890328018336276,1.62886959353576,3.95928295134085,0,1.21390318077491,0.302323556964751,0.188605079755898,0,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,2.10837217149998,0,0.680879211507576,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0.704015124191131,0.21183207086382,0.661585194164886,0.65954501176592,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.874442509889552,4.07935664423121,1.02522528478712,2.06386867963222,1.29636169158798,0.941842285023455,0.683471138605126,1.14389086603261,0.509935289981566,0.419854356970974,0.552799895217695,0,1.10717597753397,0.406638934253697,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.518459893167171,4.97071450469541,0,0.598066184175915,0.66183396182839,0.777804753376191,0.774958940866387,0.675824501963113,0.704143431874524,1.17183946359555,0.943734099831398,0.241584120826006,0,2.8441000856536,0,0.205421914329655,0.51968329191118,0.716106782669926,0.39736270956253,0.240390899039938,0.295379054349154,0.403865799792591,0.685861259894999,0.100826185136841,1.07203668813728,2.50150788264857,2.33753804363138,0.453460767230423,0,0,0,1.73870634628971,1.50145980360946,1.09890974560359,1.07184189539533,0,5.64751842617067,4.14292712856459,4.01026859407578,4.1244763762485,6.85082519770642,6.0431511791176,2.70009000092722,5.40385443869065,5.43770890781046,5.69536342927002,0.103787347584177,1.19707462020309,0.341467211508268,1.45864030240976,0,0.551530525350042,1.55572709461131,0.618105171716683,2.56735367673452,1.26348605881899,1.2673964994512,0.943131706930381,0.468207537349412,1.15245274328765,1.32101578597911,0,1.15884325944855,1.35036454324594,1.23625770240992,1.32479028120958,1.02860775715625,1.242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| |||
|short_description=p1@Nrg2 | |||
}} |
Revision as of 16:03, 13 September 2013
Short description: | p1@Nrg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrg2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000115712, ENSMUST00000115713_5end |
EntrezGene: | Nrg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.25e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-09 | 23 |
neural cell | 2.24e-08 | 43 |
ectodermal cell | 5.70e-08 | 44 |
neurectodermal cell | 5.70e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.