FFCP PHASE1:Hg19::chr6:130031298..130031345,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21035 | |||
|TSSclassifier=S | |||
|UniProt=Q8N392 | |||
|association_with_transcript=24bp_to_ENST00000275189,NM_033515,uc003qbr.2,uc011ebw.1_5end | |||
|description=CAGE_peak_1_at_ARHGAP18_5end | |||
|id=chr6:130031298..130031345,- | |||
|ontology_enrichment_celltype=CL:0000557!3.48e-13!71;CL:0000839!8.80e-13!70;CL:0000766!4.84e-12!76;CL:0002009!5.71e-11!65;CL:0002194!6.27e-11!63;CL:0000576!6.27e-11!63;CL:0000040!6.27e-11!63;CL:0000559!6.27e-11!63;CL:0000763!6.90e-10!112;CL:0000049!6.90e-10!112;CL:0002139!7.60e-10!24;CL:0000071!1.06e-08!18;CL:0002546!1.06e-08!18;CL:0000115!1.40e-08!35;CL:0000213!2.36e-08!57;CL:0000215!2.36e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.30e-10;39!CL:0000234;3.30e-10;39!CL:0002139;7.72e-10;24!CL:0000860;7.86e-09;33!CL:0002057;7.86e-09;33!CL:0000071;1.08e-08;18!CL:0000115;1.46e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.05e-13,67;CL:0000839,5.27e-13,66;CL:0000766,3.34e-12,72;CL:0002009,3.70e-11,61;CL:0002194,3.94e-11,59;CL:0000576,3.94e-11,59;CL:0000040,3.94e-11,59;CL:0000559,3.94e-11,59;CL:0000763,6.95e-10,108;CL:0000049,6.95e-10,108;CL:0002139,7.59e-10,24;CL:0000071,1.06e-08,18;CL:0002546,1.06e-08,18;CL:0000115,1.48e-08,36;CL:0000213,2.31e-08,58;CL:0000215,2.31e-08,58;CL:0000473,3.14e-08,48;CL:0000234,3.14e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002546;1.08e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.98e-15!448;UBERON:0004120!1.98e-15!448;UBERON:0006603!1.98e-15!448;UBERON:0003081!1.24e-13!216;UBERON:0002371!7.58e-12!80;UBERON:0002193!1.39e-10!112;UBERON:0002405!4.58e-10!115;UBERON:0002390!5.36e-10!102;UBERON:0003061!5.36e-10!102;UBERON:0000467!2.08e-09!625;UBERON:0001474!2.79e-09!86;UBERON:0000480!3.27e-09!626;UBERON:0004765!7.84e-09!101;UBERON:0001434!7.84e-09!101;UBERON:0001986!1.06e-08!18;UBERON:0004638!1.06e-08!18;UBERON:0004852!1.06e-08!18;UBERON:0000468!5.47e-08!659;UBERON:0002204!6.42e-08!167;UBERON:0004535!7.22e-08!110;UBERON:0000487!8.95e-08!22;UBERON:0001009!2.19e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.08e-08;18!UBERON:0001986;1.08e-08;18!UBERON:0004852;1.08e-08;18!UBERON:0000487;9.35e-08;22 | |||
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| |||
|short_description=p1@ARHGAP18 | |||
}} |
Revision as of 17:55, 13 September 2013
Short description: | p1@ARHGAP18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ARHGAP18_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000275189, NM_033515, uc003qbr.2, uc011ebw.1_5end |
EntrezGene: | ARHGAP18 |
HGNC: | 21035 |
UniProt: | Q8N392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.05e-13 | 67 |
myeloid lineage restricted progenitor cell | 5.27e-13 | 66 |
myeloid leukocyte | 3.34e-12 | 72 |
macrophage dendritic cell progenitor | 3.70e-11 | 61 |
monopoietic cell | 3.94e-11 | 59 |
monocyte | 3.94e-11 | 59 |
monoblast | 3.94e-11 | 59 |
promonocyte | 3.94e-11 | 59 |
myeloid cell | 6.95e-10 | 108 |
common myeloid progenitor | 6.95e-10 | 108 |
endothelial cell of vascular tree | 7.59e-10 | 24 |
blood vessel endothelial cell | 1.06e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.06e-08 | 18 |
endothelial cell | 1.48e-08 | 36 |
lining cell | 2.31e-08 | 58 |
barrier cell | 2.31e-08 | 58 |
defensive cell | 3.14e-08 | 48 |
phagocyte | 3.14e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.79e-15 | 203 |
mesoderm | 5.31e-15 | 315 |
mesoderm-derived structure | 5.31e-15 | 315 |
presumptive mesoderm | 5.31e-15 | 315 |
bone marrow | 5.57e-12 | 76 |
immune system | 9.93e-11 | 93 |
hemolymphoid system | 1.30e-10 | 108 |
hematopoietic system | 4.86e-10 | 98 |
blood island | 4.86e-10 | 98 |
bone element | 2.44e-09 | 82 |
skeletal element | 3.92e-09 | 90 |
blood vessel endothelium | 1.06e-08 | 18 |
endothelium | 1.06e-08 | 18 |
cardiovascular system endothelium | 1.06e-08 | 18 |
skeletal system | 1.65e-08 | 100 |
cardiovascular system | 8.56e-08 | 109 |
simple squamous epithelium | 8.95e-08 | 22 |
musculoskeletal system | 1.43e-07 | 167 |
embryonic structure | 2.42e-07 | 564 |
circulatory system | 2.59e-07 | 112 |
germ layer | 6.37e-07 | 560 |
germ layer / neural crest | 6.37e-07 | 560 |
embryonic tissue | 6.37e-07 | 560 |
presumptive structure | 6.37e-07 | 560 |
germ layer / neural crest derived structure | 6.37e-07 | 560 |
epiblast (generic) | 6.37e-07 | 560 |
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