FFCP PHASE1:Mm9::chr19:5085483..5085501,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=381199|HGNC=|MCL_coexpression_id=1|UniProt=D3Z5V1,D3YTM7|association_with_transcript=0bp_to_ENSMUST00000140389,ENSMUST00000151413_5end|description=CAGE_peak_1_at_Tmem151a_5end|id=chr19:5085483..5085501,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.98e-13!52;UBERON:0005068!9.98e-13!52;UBERON:0006241!9.98e-13!52;UBERON:0007135!9.98e-13!52;UBERON:0000073!5.15e-12!75;UBERON:0001016!5.15e-12!75;UBERON:0001017!6.13e-12!73;UBERON:0005743!6.13e-12!73;UBERON:0000955!6.69e-12!50;UBERON:0006238!6.69e-12!50;UBERON:0002020!2.09e-11!34;UBERON:0002616!2.09e-11!49;UBERON:0002346!4.28e-09!71;UBERON:0003075!4.28e-09!71;UBERON:0007284!4.28e-09!71;UBERON:0002791!5.67e-09!29;UBERON:0003528!5.67e-09!29;UBERON:0001893!5.67e-09!29;UBERON:0000025!6.60e-09!114;UBERON:0000033!8.47e-09!63;UBERON:0004111!2.17e-08!122;UBERON:0002021!4.64e-08!10;UBERON:0000411!4.64e-08!10;UBERON:0001950!4.64e-08!10;UBERON:0003080!5.06e-08!40;UBERON:0004121!9.95e-08!102;UBERON:0000924!9.95e-08!102;UBERON:0006601!9.95e-08!102;UBERON:0002780!1.46e-07!39;UBERON:0001890!1.46e-07!39;UBERON:0006240!1.46e-07!39;UBERON:0002619!2.50e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.95e-13,54;UBERON:0001049,2.55e-12,52;UBERON:0005068,2.55e-12,52;UBERON:0006241,2.55e-12,52;UBERON:0007135,2.55e-12,52;UBERON:0001016,2.27e-11,75;UBERON:0001017,2.75e-11,73;UBERON:0002020,5.82e-11,34;UBERON:0000955,7.73e-10,47;UBERON:0006238,7.73e-10,47;UBERON:0010314,1.18e-09,92;UBERON:0002616,2.30e-09,46;UBERON:0002346,4.75e-09,64;UBERON:0003075,4.75e-09,64;UBERON:0007284,4.75e-09,64;UBERON:0000025,1.32e-08,114;UBERON:0003528,1.63e-08,29;UBERON:0002791,1.63e-08,29;UBERON:0001893,1.63e-08,29;UBERON:0002021,3.23e-08,10;UBERON:0000411,3.23e-08,10;UBERON:0001950,3.23e-08,10;UBERON:0004111,5.25e-08,122;UBERON:0003080,9.77e-08,40;UBERON:0004121,1.79e-07,95;UBERON:0000924,1.79e-07,95;UBERON:0006601,1.79e-07,95;UBERON:0002780,2.81e-07,39;UBERON:0001890,2.81e-07,39;UBERON:0006240,2.81e-07,39;UBERON:0002619,3.32e-07,17|phase1_expression=1.60148847104794,11.5161884520989,7.27998783023258,3.93203474698879,4.50806156951712,3.18970616632591,3.03696432774183,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0,0.42438965179803,37.0788745058664,0,0.522399578277871,1.91990907352088,2.06468352960453,1.72269589234506,2.15380998079537,3.01659725760245,1.52018735565099,1.26015064879965,1.99557459589774,0,0.61506478758457,0,0.866554859253824,0.166234645358492,2.45003227514843,0,0,0,0,0.683045484958446,0,90.0162248525378,102.492077462929,19.2724089769766,14.8654355426127,0.65407546914134,11.4236815021925,9.72149495371417,3.49966054063406,1.43752564364972,0,0,0.336093799142464,0,8.02293631828519,21.6582278756526,10.5204559646991,15.869729378161,17.747279298173,1.0165335962074,2.66788438833342,11.6986963246582,9.88866362566974,7.8152812644071,14.9800055259202,15.3687322128622,0.207379224616955,0.945041568321835,0.630974884054146,147.96720992117,131.195913325258,2.69479758272899,0.862609239164127,2.75765635983006,324.841848948197,238.392260205045,238.090126547177,12.265424758908,11.2529801630964,8.33461392890816,243.447575129204,171.079833449631,204.749652020926,89.2724613985213,76.026477546721,27.0279196446686,4.24066682665831,6.2724394888632,11.8844440367688,0,0,0.539703191637817,0.649776417447669,0,11.6568868709354,31.1887490317846,24.4198844326697,39.5740323451581,2.81686839553361,17.9657068380045,10.1922095882658,28.4426681261332,0.649473123033642,0,0,9.47726201668198,0,2.9688427812965,3.81667718885499,4.56698217468212,5.99600292865752,4.06951129492081,6.93773372100658,1.38233250462643,12.8541383221874,11.2787498397531,0,0.485300549842228,0.441683036920787,1.93950101254089,7.45567044872489,71.7312952678291,90.8998707570395,1.02182822083437,0.838705871541442,0,0.127070227073065,171.809863397332,220.515290558578,18.0942267042525,267.689453096106,250.089717269063,243.527588223804,207.344334200594,29.2278974250408,2.36373244159177,2.0217820674694,6.52369753248069,0,0,0.540186389416048,0.452114453507145,2.9255694635071,3.84341160854549,4.2165776051878,15.78090561508,0,0.756424320671277,0.175951124163949,0,0,0.348252166522167,0.205782136407943,11.7430217422911,0.702213187313235,0.257347907114715,0,10.7705401718461,7.50483391939508,5.94204802821349,7.10234206755631,2.95146347621106,7.0962871928194,5.58081467400979,7.51165523918934,4.55384835231961,4.93679549740441,3.11918181750281,5.99909190639332,5.99419948443863,10.5384055339704,9.39444931322602,215.126617381102,13.0688857721691,0.991256348951394,3.70230793328962,9.38468302355029,8.59275685883622,7.7320476793256,6.05050573870028,7.11609740303585,5.32631753115166,1.89811624617805,6.91735609840846,6.03204501120647,5.96869416123452,7.01870713628832,3.59527763461689,3.24207074812041,3.78368419183298,0,0.685491075658373,2.25415471346161,0.610953983535943,1.55161989734101,1.19230893813542,1.89709611372772,3.9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| ||
|EntrezGene=381199 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3Z5V1,D3YTM7 | |||
|association_with_transcript=0bp_to_ENSMUST00000140389,ENSMUST00000151413_5end | |||
|description=CAGE_peak_1_at_Tmem151a_5end | |||
|id=chr19:5085483..5085501,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.98e-13!52;UBERON:0005068!9.98e-13!52;UBERON:0006241!9.98e-13!52;UBERON:0007135!9.98e-13!52;UBERON:0000073!5.15e-12!75;UBERON:0001016!5.15e-12!75;UBERON:0001017!6.13e-12!73;UBERON:0005743!6.13e-12!73;UBERON:0000955!6.69e-12!50;UBERON:0006238!6.69e-12!50;UBERON:0002020!2.09e-11!34;UBERON:0002616!2.09e-11!49;UBERON:0002346!4.28e-09!71;UBERON:0003075!4.28e-09!71;UBERON:0007284!4.28e-09!71;UBERON:0002791!5.67e-09!29;UBERON:0003528!5.67e-09!29;UBERON:0001893!5.67e-09!29;UBERON:0000025!6.60e-09!114;UBERON:0000033!8.47e-09!63;UBERON:0004111!2.17e-08!122;UBERON:0002021!4.64e-08!10;UBERON:0000411!4.64e-08!10;UBERON:0001950!4.64e-08!10;UBERON:0003080!5.06e-08!40;UBERON:0004121!9.95e-08!102;UBERON:0000924!9.95e-08!102;UBERON:0006601!9.95e-08!102;UBERON:0002780!1.46e-07!39;UBERON:0001890!1.46e-07!39;UBERON:0006240!1.46e-07!39;UBERON:0002619!2.50e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.95e-13,54;UBERON:0001049,2.55e-12,52;UBERON:0005068,2.55e-12,52;UBERON:0006241,2.55e-12,52;UBERON:0007135,2.55e-12,52;UBERON:0001016,2.27e-11,75;UBERON:0001017,2.75e-11,73;UBERON:0002020,5.82e-11,34;UBERON:0000955,7.73e-10,47;UBERON:0006238,7.73e-10,47;UBERON:0010314,1.18e-09,92;UBERON:0002616,2.30e-09,46;UBERON:0002346,4.75e-09,64;UBERON:0003075,4.75e-09,64;UBERON:0007284,4.75e-09,64;UBERON:0000025,1.32e-08,114;UBERON:0003528,1.63e-08,29;UBERON:0002791,1.63e-08,29;UBERON:0001893,1.63e-08,29;UBERON:0002021,3.23e-08,10;UBERON:0000411,3.23e-08,10;UBERON:0001950,3.23e-08,10;UBERON:0004111,5.25e-08,122;UBERON:0003080,9.77e-08,40;UBERON:0004121,1.79e-07,95;UBERON:0000924,1.79e-07,95;UBERON:0006601,1.79e-07,95;UBERON:0002780,2.81e-07,39;UBERON:0001890,2.81e-07,39;UBERON:0006240,2.81e-07,39;UBERON:0002619,3.32e-07,17 | |||
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| |||
|short_description=p1@Tmem151a | |||
}} |
Revision as of 17:59, 13 September 2013
Short description: | p1@Tmem151a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem151a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000140389, ENSMUST00000151413_5end |
EntrezGene: | Tmem151a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.95e-13 | 54 |
neural tube | 2.55e-12 | 52 |
neural rod | 2.55e-12 | 52 |
future spinal cord | 2.55e-12 | 52 |
neural keel | 2.55e-12 | 52 |
nervous system | 2.27e-11 | 75 |
central nervous system | 2.75e-11 | 73 |
gray matter | 5.82e-11 | 34 |
brain | 7.73e-10 | 47 |
future brain | 7.73e-10 | 47 |
structure with developmental contribution from neural crest | 1.18e-09 | 92 |
regional part of brain | 2.30e-09 | 46 |
neurectoderm | 4.75e-09 | 64 |
neural plate | 4.75e-09 | 64 |
presumptive neural plate | 4.75e-09 | 64 |
tube | 1.32e-08 | 114 |
brain grey matter | 1.63e-08 | 29 |
regional part of telencephalon | 1.63e-08 | 29 |
telencephalon | 1.63e-08 | 29 |
occipital lobe | 3.23e-08 | 10 |
visual cortex | 3.23e-08 | 10 |
neocortex | 3.23e-08 | 10 |
anatomical conduit | 5.25e-08 | 122 |
anterior neural tube | 9.77e-08 | 40 |
ectoderm-derived structure | 1.79e-07 | 95 |
ectoderm | 1.79e-07 | 95 |
presumptive ectoderm | 1.79e-07 | 95 |
regional part of forebrain | 2.81e-07 | 39 |
forebrain | 2.81e-07 | 39 |
future forebrain | 2.81e-07 | 39 |
regional part of cerebral cortex | 3.32e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.