FFCP PHASE1:Mm9::chr19:6341746..6341793,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=26412|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000152259,uc008gij.1_5end|description=CAGE_peak_3_at_Map4k2_5end|id=chr19:6341746..6341793,+|ontology_enrichment_celltype=CL:0000791!2.42e-07!9;CL:0000789!2.42e-07!9;CL:0002420!2.42e-07!9;CL:0002419!2.42e-07!9;CL:0000790!2.42e-07!9;CL:0000838!7.69e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,1.49e-11,9;CL:0000789,1.49e-11,9;CL:0002420,1.49e-11,9;CL:0002419,1.49e-11,9;CL:0000790,1.49e-11,9;CL:0000624,2.35e-10,8;CL:0000838,4.31e-10,12;CL:0002031,1.01e-09,25;CL:0000542,4.53e-09,13;CL:0000051,4.53e-09,13;CL:0000084,6.07e-09,11;CL:0000827,6.07e-09,11;CL:0000893,6.93e-08,6;CL:0002489,6.93e-08,6;CL:0000898,6.93e-08,6;CL:0000809,6.93e-08,6;CL:0000810,6.93e-08,6;CL:0000895,6.93e-08,6;CL:0000808,6.93e-08,6;CL:0000894,6.93e-08,6;CL:0000806,6.93e-08,6;CL:0000807,6.93e-08,6;CL:0000805,6.93e-08,6;CL:0002425,6.93e-08,6;CL:0002436,6.93e-08,6;CL:0002427,6.93e-08,6;CL:0002428,6.93e-08,6;CL:0002429,6.93e-08,6;CL:0002433,6.93e-08,6;CL:0002431,6.93e-08,6;CL:0002432,6.93e-08,6;CL:0000553,5.15e-07,6;CL:0000556,5.15e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.49e-12!70;UBERON:0004177!7.18e-12!29;UBERON:0002193!7.32e-12!48;UBERON:0005057!7.32e-11!51;UBERON:0002390!2.35e-10!45;UBERON:0003061!2.35e-10!45;UBERON:0003408!2.06e-09!24;UBERON:0002370!4.87e-09!23;UBERON:0000974!4.87e-09!23;UBERON:0004807!4.87e-09!23;UBERON:0005058!4.87e-09!23;UBERON:0003351!4.87e-09!23;UBERON:0009113!4.87e-09!23;UBERON:0003295!4.87e-09!23;UBERON:0009722!4.87e-09!23;UBERON:0005562!4.87e-09!23;UBERON:0007690!4.87e-09!23;UBERON:0006562!1.10e-08!24;UBERON:0001557!1.10e-08!24;UBERON:0001042!1.10e-08!24;UBERON:0008814!1.10e-08!24;UBERON:0009145!1.10e-08!24;UBERON:0001004!1.15e-08!42;UBERON:0000065!2.59e-08!41;UBERON:0001041!1.46e-07!92;UBERON:0003081!1.86e-07!88;UBERON:0000477!2.90e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.22e-21,48;UBERON:0002405,5.22e-21,48;UBERON:0004177,7.83e-21,29;UBERON:0005057,7.83e-21,29;UBERON:0002390,2.52e-18,45;UBERON:0003061,2.52e-18,45;UBERON:0003408,1.59e-16,24;UBERON:0002370,7.08e-16,23;UBERON:0000974,7.08e-16,23;UBERON:0004807,7.08e-16,23;UBERON:0005058,7.08e-16,23;UBERON:0003351,7.08e-16,23;UBERON:0009113,7.08e-16,23;UBERON:0003295,7.08e-16,23;UBERON:0009722,7.08e-16,23;UBERON:0005562,7.08e-16,23;UBERON:0007690,7.08e-16,23;UBERON:0000077,9.30e-16,35;UBERON:0006562,6.17e-15,24;UBERON:0001557,6.17e-15,24;UBERON:0001042,6.17e-15,24;UBERON:0008814,6.17e-15,24;UBERON:0009145,6.17e-15,24;UBERON:0001004,1.88e-13,42;UBERON:0000065,7.48e-13,41;UBERON:0000072,1.50e-12,27;UBERON:0001041,1.33e-10,80;UBERON:0003081,5.65e-09,87;UBERON:0007811,8.35e-09,36;UBERON:0005911,5.77e-08,69|phase1_expression=0,0,0,0.30246421130683,0,0,0,59.2676054596835,23.3709278771767,18.0229685267935,6.16384685611818,5.18519033469687,42.8001824828014,51.9277190368845,3.66420737997229,4.04950534779652,1.39912375625629,32.3348719492194,29.2053743580224,25.8877687596798,0.850432901510698,0.198581902401771,0.261199789138935,5.91971964335605,4.35877634027623,0,0,0,0.190023419456374,1.00812051903972,0.665191531965914,0,0,0,0,0,0,12.5559489221072,8.5946887897618,9.94695113550217,27.0586484494267,25.2726829434625,19.4204141212461,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0,0,38.0866515751062,38.4441935266013,36.2981303073861,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0.441737081903227,0,0,0.919218786610021,0,1.0214987046815,1.53606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0.427115042397309,0,0.227178579999552,0,0.579728977403356,2.58127163094416,0.679971333707751,0,0,0,1.68533304158102,0,0.259786004602869,0,0,0,0,0,0,0,0,1.59857431606684,19.1614033898907,0.890652834388949,0,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,0.247194967734374,0.722996784599558,6.19227386364912,0.647067399789637,4.63767188766826,1.93950101254089,0,1.17112318804619,1.67557365450764,0.766371165625774,0.479260498023681,0,0.381210681219194,2.84602214869163,0.457500602818626,0,0.695297280769106,0.767146371990992,1.87009240103604,2.27137768294861,0.203678727700633,3.11017426525233,0,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0,0.2562274405697,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0,0.350296027101508,0.16455984991348,0.820837320395476,0.56748166682099,1.31579988682799,1.09775057645525,1.20785776884335,0.841159794256509,0,0.660837565967596,0,0,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0.19496408711912,0.898819408654221,0.648414149624083,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.379419222745544,0.295220295959204,0.627994911365499,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.405720242777006,0.964708639009667,1.01850340712568,1.43848068725405,2.10775794807546,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,1.26289438973556,0.358794827043824,0.482443521363367,3.14080423283228,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0.952174563544055,0.585400943573396,1.41871629695572,1.32878813789265,2.23236676120482,2.62181303545181,2.41758974612254,2.89298117163023,0,0.54390568381871,0.983528546038072,1.93155722413313,4.97706828962155,3.04750385139728,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.329940245945071,1.32745138339963,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,2.06271086496374,0,0,0,0,0.354680467284547,0.356737635204141,0.329098041204242,0,0.469343416127421,0,0,0,0.161464426695906,0.180938774784468,0,0,2.04036585640896,1.8542530201051,7.34744787430767,1.44470807574256,1.85194527369712,4.52084296811258,10.798843989961,9.37990510146743,1.35982743995084,1.81936888020755,1.52019971184866,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.330613822901344,0,0.129614973291793,1.86401793926078,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.352071715937262,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,22.4367895646007,0.405450430580328,2.15693010046137,3.11809975146708,5.37080087002444,8.14593554603186,13.2214994471966,12.5536098098391,14.7411016924296,17.908599563925,18.0478871394945,21.7331074049648,17.0294959703383,23.9597649472216,0.226730383615211,0,0,0,0,0.750729901804728,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0.572895513439397,0.68741272937475,1.37016503954128,0.755393897389701,0,0.900642406448441,1.35942722695261,1.55328093525546,0,0,0,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0,0.565879024158229,0.280924522409647,0.448176066834085,0.17230640686684,0,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.726732083161643,0,0.338458431566706,0.73171189149109,0.789209134313529,0.543216455383447,0.561142271657738,0,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0.382576664137687,1.32354851471709,1.15933917810211|short_description=p3@Map4k2}} | ||
|EntrezGene=26412 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000152259,uc008gij.1_5end | |||
|description=CAGE_peak_3_at_Map4k2_5end | |||
|id=chr19:6341746..6341793,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.42e-07!9;CL:0000789!2.42e-07!9;CL:0002420!2.42e-07!9;CL:0002419!2.42e-07!9;CL:0000790!2.42e-07!9;CL:0000838!7.69e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.49e-11,9;CL:0000789,1.49e-11,9;CL:0002420,1.49e-11,9;CL:0002419,1.49e-11,9;CL:0000790,1.49e-11,9;CL:0000624,2.35e-10,8;CL:0000838,4.31e-10,12;CL:0002031,1.01e-09,25;CL:0000542,4.53e-09,13;CL:0000051,4.53e-09,13;CL:0000084,6.07e-09,11;CL:0000827,6.07e-09,11;CL:0000893,6.93e-08,6;CL:0002489,6.93e-08,6;CL:0000898,6.93e-08,6;CL:0000809,6.93e-08,6;CL:0000810,6.93e-08,6;CL:0000895,6.93e-08,6;CL:0000808,6.93e-08,6;CL:0000894,6.93e-08,6;CL:0000806,6.93e-08,6;CL:0000807,6.93e-08,6;CL:0000805,6.93e-08,6;CL:0002425,6.93e-08,6;CL:0002436,6.93e-08,6;CL:0002427,6.93e-08,6;CL:0002428,6.93e-08,6;CL:0002429,6.93e-08,6;CL:0002433,6.93e-08,6;CL:0002431,6.93e-08,6;CL:0002432,6.93e-08,6;CL:0000553,5.15e-07,6;CL:0000556,5.15e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.49e-12!70;UBERON:0004177!7.18e-12!29;UBERON:0002193!7.32e-12!48;UBERON:0005057!7.32e-11!51;UBERON:0002390!2.35e-10!45;UBERON:0003061!2.35e-10!45;UBERON:0003408!2.06e-09!24;UBERON:0002370!4.87e-09!23;UBERON:0000974!4.87e-09!23;UBERON:0004807!4.87e-09!23;UBERON:0005058!4.87e-09!23;UBERON:0003351!4.87e-09!23;UBERON:0009113!4.87e-09!23;UBERON:0003295!4.87e-09!23;UBERON:0009722!4.87e-09!23;UBERON:0005562!4.87e-09!23;UBERON:0007690!4.87e-09!23;UBERON:0006562!1.10e-08!24;UBERON:0001557!1.10e-08!24;UBERON:0001042!1.10e-08!24;UBERON:0008814!1.10e-08!24;UBERON:0009145!1.10e-08!24;UBERON:0001004!1.15e-08!42;UBERON:0000065!2.59e-08!41;UBERON:0001041!1.46e-07!92;UBERON:0003081!1.86e-07!88;UBERON:0000477!2.90e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.22e-21,48;UBERON:0002405,5.22e-21,48;UBERON:0004177,7.83e-21,29;UBERON:0005057,7.83e-21,29;UBERON:0002390,2.52e-18,45;UBERON:0003061,2.52e-18,45;UBERON:0003408,1.59e-16,24;UBERON:0002370,7.08e-16,23;UBERON:0000974,7.08e-16,23;UBERON:0004807,7.08e-16,23;UBERON:0005058,7.08e-16,23;UBERON:0003351,7.08e-16,23;UBERON:0009113,7.08e-16,23;UBERON:0003295,7.08e-16,23;UBERON:0009722,7.08e-16,23;UBERON:0005562,7.08e-16,23;UBERON:0007690,7.08e-16,23;UBERON:0000077,9.30e-16,35;UBERON:0006562,6.17e-15,24;UBERON:0001557,6.17e-15,24;UBERON:0001042,6.17e-15,24;UBERON:0008814,6.17e-15,24;UBERON:0009145,6.17e-15,24;UBERON:0001004,1.88e-13,42;UBERON:0000065,7.48e-13,41;UBERON:0000072,1.50e-12,27;UBERON:0001041,1.33e-10,80;UBERON:0003081,5.65e-09,87;UBERON:0007811,8.35e-09,36;UBERON:0005911,5.77e-08,69 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,59.2676054596835,23.3709278771767,18.0229685267935,6.16384685611818,5.18519033469687,42.8001824828014,51.9277190368845,3.66420737997229,4.04950534779652,1.39912375625629,32.3348719492194,29.2053743580224,25.8877687596798,0.850432901510698,0.198581902401771,0.261199789138935,5.91971964335605,4.35877634027623,0,0,0,0.190023419456374,1.00812051903972,0.665191531965914,0,0,0,0,0,0,12.5559489221072,8.5946887897618,9.94695113550217,27.0586484494267,25.2726829434625,19.4204141212461,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0,0,38.0866515751062,38.4441935266013,36.2981303073861,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0.441737081903227,0,0,0.919218786610021,0,1.0214987046815,1.53606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0.427115042397309,0,0.227178579999552,0,0.579728977403356,2.58127163094416,0.679971333707751,0,0,0,1.68533304158102,0,0.259786004602869,0,0,0,0,0,0,0,0,1.59857431606684,19.1614033898907,0.890652834388949,0,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,0.247194967734374,0.722996784599558,6.19227386364912,0.647067399789637,4.63767188766826,1.93950101254089,0,1.17112318804619,1.67557365450764,0.766371165625774,0.479260498023681,0,0.381210681219194,2.84602214869163,0.457500602818626,0,0.695297280769106,0.767146371990992,1.87009240103604,2.27137768294861,0.203678727700633,3.11017426525233,0,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0,0.2562274405697,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0,0.350296027101508,0.16455984991348,0.820837320395476,0.56748166682099,1.31579988682799,1.09775057645525,1.20785776884335,0.841159794256509,0,0.660837565967596,0,0,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0.19496408711912,0.898819408654221,0.648414149624083,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.379419222745544,0.295220295959204,0.627994911365499,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.405720242777006,0.964708639009667,1.01850340712568,1.43848068725405,2.10775794807546,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,1.26289438973556,0.358794827043824,0.482443521363367,3.14080423283228,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0.952174563544055,0.585400943573396,1.41871629695572,1.32878813789265,2.23236676120482,2.62181303545181,2.41758974612254,2.89298117163023,0,0.54390568381871,0.983528546038072,1.93155722413313,4.97706828962155,3.04750385139728,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.329940245945071,1.32745138339963,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,2.06271086496374,0,0,0,0,0.354680467284547,0.356737635204141,0.329098041204242,0,0.469343416127421,0,0,0,0.161464426695906,0.180938774784468,0,0,2.04036585640896,1.8542530201051,7.34744787430767,1.44470807574256,1.85194527369712,4.52084296811258,10.798843989961,9.37990510146743,1.35982743995084,1.81936888020755,1.52019971184866,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.330613822901344,0,0.129614973291793,1.86401793926078,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.352071715937262,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,22.4367895646007,0.405450430580328,2.15693010046137,3.11809975146708,5.37080087002444,8.14593554603186,13.2214994471966,12.5536098098391,14.7411016924296,17.908599563925,18.0478871394945,21.7331074049648,17.0294959703383,23.9597649472216,0.226730383615211,0,0,0,0,0.750729901804728,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0.572895513439397,0.68741272937475,1.37016503954128,0.755393897389701,0,0.900642406448441,1.35942722695261,1.55328093525546,0,0,0,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0,0.565879024158229,0.280924522409647,0.448176066834085,0.17230640686684,0,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.726732083161643,0,0.338458431566706,0.73171189149109,0.789209134313529,0.543216455383447,0.561142271657738,0,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0.382576664137687,1.32354851471709,1.15933917810211 | |||
|short_description=p3@Map4k2 | |||
}} |
Revision as of 18:21, 13 September 2013
Short description: | p3@Map4k2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Map4k2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000152259, uc008gij.1_5end |
EntrezGene: | Map4k2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.22e-21 | 48 |
immune system | 5.22e-21 | 48 |
hemopoietic organ | 7.83e-21 | 29 |
immune organ | 7.83e-21 | 29 |
hematopoietic system | 2.52e-18 | 45 |
blood island | 2.52e-18 | 45 |
gland of gut | 1.59e-16 | 24 |
thymus | 7.08e-16 | 23 |
neck | 7.08e-16 | 23 |
respiratory system epithelium | 7.08e-16 | 23 |
hemolymphoid system gland | 7.08e-16 | 23 |
pharyngeal epithelium | 7.08e-16 | 23 |
thymic region | 7.08e-16 | 23 |
pharyngeal gland | 7.08e-16 | 23 |
entire pharyngeal arch endoderm | 7.08e-16 | 23 |
thymus primordium | 7.08e-16 | 23 |
early pharyngeal endoderm | 7.08e-16 | 23 |
mixed endoderm/mesoderm-derived structure | 9.30e-16 | 35 |
pharynx | 6.17e-15 | 24 |
upper respiratory tract | 6.17e-15 | 24 |
chordate pharynx | 6.17e-15 | 24 |
pharyngeal arch system | 6.17e-15 | 24 |
pharyngeal region of foregut | 6.17e-15 | 24 |
respiratory system | 1.88e-13 | 42 |
respiratory tract | 7.48e-13 | 41 |
segment of respiratory tract | 1.50e-12 | 27 |
foregut | 1.33e-10 | 80 |
lateral plate mesoderm | 5.65e-09 | 87 |
craniocervical region | 8.35e-09 | 36 |
endo-epithelium | 5.77e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.