FFCP PHASE1:Mm9::chr1:80755056..80755074,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=210293|HGNC=|MCL_coexpression_id=1398|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0|association_with_transcript=53bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end|description=CAGE_peak_5_at_Dock10_5end|id=chr1:80755056..80755074,-|ontology_enrichment_celltype=CL:0000988!1.53e-09!32;CL:0002032!1.53e-09!32;CL:0000037!1.53e-09!32;CL:0000566!1.53e-09!32;CL:0000837!1.53e-09!32;CL:0000838!9.87e-08!12;CL:0000791!2.05e-07!9;CL:0000789!2.05e-07!9;CL:0002420!2.05e-07!9;CL:0002419!2.05e-07!9;CL:0000790!2.05e-07!9;CL:0000084!3.57e-07!11;CL:0000827!3.57e-07!11;CL:0000542!7.09e-07!13;CL:0000051!7.09e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,3.03e-14,32;CL:0002032,3.03e-14,32;CL:0000037,3.03e-14,32;CL:0000837,3.03e-14,32;CL:0002031,3.62e-10,25;CL:0000838,6.00e-10,12;CL:0000791,1.61e-09,9;CL:0000789,1.61e-09,9;CL:0002420,1.61e-09,9;CL:0002419,1.61e-09,9;CL:0000790,1.61e-09,9;CL:0000084,3.42e-09,11;CL:0000827,3.42e-09,11;CL:0000542,8.02e-09,13;CL:0000051,8.02e-09,13;CL:0000624,1.41e-08,8;CL:0000738,1.90e-08,17;CL:0002087,1.90e-08,17;CL:0002320,1.42e-07,46;CL:0000134,1.42e-07,46;CL:0000034,2.14e-07,97;CL:0000049,5.97e-07,19;CL:0000893,8.25e-07,6;CL:0002489,8.25e-07,6;CL:0000898,8.25e-07,6;CL:0000809,8.25e-07,6;CL:0000810,8.25e-07,6;CL:0000895,8.25e-07,6;CL:0000808,8.25e-07,6;CL:0000894,8.25e-07,6;CL:0000806,8.25e-07,6;CL:0000807,8.25e-07,6;CL:0000805,8.25e-07,6;CL:0002425,8.25e-07,6;CL:0002436,8.25e-07,6;CL:0002427,8.25e-07,6;CL:0002428,8.25e-07,6;CL:0002429,8.25e-07,6;CL:0002433,8.25e-07,6;CL:0002431,8.25e-07,6;CL:0002432,8.25e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.36e-13!48;UBERON:0002390!2.54e-12!45;UBERON:0003061!2.54e-12!45;UBERON:0004177!6.95e-09!29;UBERON:0003408!5.12e-07!24;UBERON:0002370!7.20e-07!23;UBERON:0000974!7.20e-07!23;UBERON:0004807!7.20e-07!23;UBERON:0005058!7.20e-07!23;UBERON:0003351!7.20e-07!23;UBERON:0009113!7.20e-07!23;UBERON:0003295!7.20e-07!23;UBERON:0009722!7.20e-07!23;UBERON:0005562!7.20e-07!23;UBERON:0007690!7.20e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.30e-17,45;UBERON:0003061,3.30e-17,45;UBERON:0002193,1.06e-16,48;UBERON:0002405,1.06e-16,48;UBERON:0004177,1.81e-12,29;UBERON:0005057,1.81e-12,29;UBERON:0003408,6.83e-10,24;UBERON:0002370,1.06e-09,23;UBERON:0000974,1.06e-09,23;UBERON:0004807,1.06e-09,23;UBERON:0005058,1.06e-09,23;UBERON:0003351,1.06e-09,23;UBERON:0009113,1.06e-09,23;UBERON:0003295,1.06e-09,23;UBERON:0009722,1.06e-09,23;UBERON:0005562,1.06e-09,23;UBERON:0007690,1.06e-09,23;UBERON:0006562,5.30e-09,24;UBERON:0001557,5.30e-09,24;UBERON:0001042,5.30e-09,24;UBERON:0008814,5.30e-09,24;UBERON:0009145,5.30e-09,24;UBERON:0000077,9.04e-09,35;UBERON:0002384,1.42e-07,46;UBERON:0000072,2.97e-07,27;UBERON:0003081,5.68e-07,87|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,15.8821687833139,61.1023054138234,55.0051636856685,10.4442960617558,8.77493748948701,20.3728868618135,18.9702273249224,2.99798785634096,2.83465374345756,1.39912375625629,4.57420139769445,5.75880621144103,5.51706547337439,1.53077922271926,1.09220046320974,1.04479915655574,0.47997726838022,0.91763712426868,0,0,0.215471232685889,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,5.4409111995798,4.6880120671428,6.28228492768558,1.76469446409304,2.04913645487534,6.79714494243615,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,6.04017381807851,26.1130371124084,31.5928171193916,0.257259436035947,1.14613375975503,0,0,0,0.633831403506179,0,0,0.899899717281399,1.97773272513395,0,0.299600110518405,0,0.207379224616955,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,4.40463523997555,3.83062014255563,5.22262213071228,0,0.0914876436024097,0.52091337055676,1.95428099300967,1.12552522006336,4.12555268997387,1.17851434189467,1.13897344639282,0,0.757261933331841,0.831287161174641,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,28.7421050848361,2.07818994690755,0.693941307064543,0.608930956624282,0.461230994512117,0.753613202763113,0.705532242814229,0.628332956648377,0,0.289198713839823,9.73071607144862,1.61766849947409,3.5334642953663,2.42437626567611,0,1.75668478206928,0.83778682725382,0.255457055208591,26.1196971422906,16.197373736822,19.0605340609597,4.19413790333504,2.28750301409313,0.376963056338593,1.73824320192276,0.511430914660661,4.77912502486988,3.0825839982874,0.509196819251581,4.10543003013307,0.252722758433675,0.210441855886474,0.520481771850815,0.229902104433473,0.720248519221397,0.150704817835715,0.680364991513279,0.12811372028485,0.468508622798644,0.258703370739016,0.646703978798527,0.189106080167819,0,0,1.11218899690239,1.74126083261083,1.02891068203972,0.199034266818493,14.7464769335779,12.610047448621,16.76564646434,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0,0.462801338662135,0,0.268273401399619,0.350296027101508,0.822799249567402,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,3.57492912559016,0.205809224758569,1.65209391491899,0.528901133327089,0.213288250535234,0.232236671860439,0.644337306610467,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.571242563048644,0,0,0.193952487167626,0.49095073923223,1.01178459398812,0.442830443938806,0.470996183524124,0,0,0,0.196558995113203,0.224862112384854,1.21716072833102,0.72353147925725,0.763877555344259,1.15078454980324,1.29708181420028,0.823684239564244,0,0,1.24815069245824,0.505157755894224,0,0.482443521363367,2.95605104266567,0.568474235311454,0.325929952884052,0,0,0.670025029767263,0.476087281772027,1.75620283072019,1.10344600874334,0.664394068946325,2.07291199254733,1.3109065177259,1.89953480052485,2.31438493730419,7.53956419696361,5.4390568381871,0,1.37968373152366,4.65596710964597,5.62616095642575,0,0,2.2085575359138,2.34263246577983,0.430846795465598,2.15071918157297,0.891194696329576,2.54768877709949,1.61924280669958,3.21481443702443,3.55759000151871,2.24924921495265,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.258428293168221,1.09060118843252,0.356497378384721,0.948110273807448,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0.938686832254841,0,0.220528398054962,0.16488625294148,1.13025098687134,1.02531972377865,0.238744688006273,0.164140899745061,0.291480836629851,5.37733375830478,4.61351378154202,2.27025554759545,2.40752885580625,2.63715839806567,1.77702496037333,2.74533807847827,12.2384469595576,14.5549510416604,14.3727972756601,0,0.316335993581135,0.813277868507395,0.432021363287205,0.418176592028937,0.436725127492355,0.134864346384821,0.743881101528023,0,0.259229946583586,1.24267862617385,0,0.448549638131936,0,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.104859344425711,0,0,3.79213344753814,0.608175645870493,1.64337531463724,1.68897069871134,2.68540043501222,3.77494574084403,3.12508168751919,2.80610101631697,3.12995994839258,3.50551310612999,3.42809029465258,4.19068887180935,4.71438024037614,4.9088298916259,0,0,0,0,0.579568782096571,0.93841237725591,0.73260649706906,0.214368379079066,0,0.564751842617067,0.920650473014354,0,0.515559547031063,3.42541259885321,3.0215755895588,2.70009000092722,1.80128481289688,1.35942722695261,1.55328093525546,0.103787347584177,0,0.341467211508268,1.21553358534147,0,0.367687016900028,0.888986911206461,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,1.68554713445788,1.28050304809739,1.09127391015665,0,1.0429589335037,1.15745532278223,0.824171801606613,0.441596760403192,1.37147700954166,0.887379030796687,0.715308569841963,0.726732083161643,1.03520318456864,0.846146078916765,1.28049581010941,0.526139422875686,1.22223702461276,1.68342681497322,1.18635018124174,0.788035859004508,1.22769312950907,1.23949472948773,0.771626443924566,0.749431733813838,0.935726433781634,0.429742108096597,0.382576664137687,2.64709702943419,1.15933917810211|short_description=p5@Dock10}} | ||
|EntrezGene=210293 | |||
|HGNC= | |||
|MCL_coexpression_id=1398 | |||
|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0 | |||
|association_with_transcript=53bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end | |||
|description=CAGE_peak_5_at_Dock10_5end | |||
|id=chr1:80755056..80755074,- | |||
|ontology_enrichment_celltype=CL:0000988!1.53e-09!32;CL:0002032!1.53e-09!32;CL:0000037!1.53e-09!32;CL:0000566!1.53e-09!32;CL:0000837!1.53e-09!32;CL:0000838!9.87e-08!12;CL:0000791!2.05e-07!9;CL:0000789!2.05e-07!9;CL:0002420!2.05e-07!9;CL:0002419!2.05e-07!9;CL:0000790!2.05e-07!9;CL:0000084!3.57e-07!11;CL:0000827!3.57e-07!11;CL:0000542!7.09e-07!13;CL:0000051!7.09e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.03e-14,32;CL:0002032,3.03e-14,32;CL:0000037,3.03e-14,32;CL:0000837,3.03e-14,32;CL:0002031,3.62e-10,25;CL:0000838,6.00e-10,12;CL:0000791,1.61e-09,9;CL:0000789,1.61e-09,9;CL:0002420,1.61e-09,9;CL:0002419,1.61e-09,9;CL:0000790,1.61e-09,9;CL:0000084,3.42e-09,11;CL:0000827,3.42e-09,11;CL:0000542,8.02e-09,13;CL:0000051,8.02e-09,13;CL:0000624,1.41e-08,8;CL:0000738,1.90e-08,17;CL:0002087,1.90e-08,17;CL:0002320,1.42e-07,46;CL:0000134,1.42e-07,46;CL:0000034,2.14e-07,97;CL:0000049,5.97e-07,19;CL:0000893,8.25e-07,6;CL:0002489,8.25e-07,6;CL:0000898,8.25e-07,6;CL:0000809,8.25e-07,6;CL:0000810,8.25e-07,6;CL:0000895,8.25e-07,6;CL:0000808,8.25e-07,6;CL:0000894,8.25e-07,6;CL:0000806,8.25e-07,6;CL:0000807,8.25e-07,6;CL:0000805,8.25e-07,6;CL:0002425,8.25e-07,6;CL:0002436,8.25e-07,6;CL:0002427,8.25e-07,6;CL:0002428,8.25e-07,6;CL:0002429,8.25e-07,6;CL:0002433,8.25e-07,6;CL:0002431,8.25e-07,6;CL:0002432,8.25e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.36e-13!48;UBERON:0002390!2.54e-12!45;UBERON:0003061!2.54e-12!45;UBERON:0004177!6.95e-09!29;UBERON:0003408!5.12e-07!24;UBERON:0002370!7.20e-07!23;UBERON:0000974!7.20e-07!23;UBERON:0004807!7.20e-07!23;UBERON:0005058!7.20e-07!23;UBERON:0003351!7.20e-07!23;UBERON:0009113!7.20e-07!23;UBERON:0003295!7.20e-07!23;UBERON:0009722!7.20e-07!23;UBERON:0005562!7.20e-07!23;UBERON:0007690!7.20e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.30e-17,45;UBERON:0003061,3.30e-17,45;UBERON:0002193,1.06e-16,48;UBERON:0002405,1.06e-16,48;UBERON:0004177,1.81e-12,29;UBERON:0005057,1.81e-12,29;UBERON:0003408,6.83e-10,24;UBERON:0002370,1.06e-09,23;UBERON:0000974,1.06e-09,23;UBERON:0004807,1.06e-09,23;UBERON:0005058,1.06e-09,23;UBERON:0003351,1.06e-09,23;UBERON:0009113,1.06e-09,23;UBERON:0003295,1.06e-09,23;UBERON:0009722,1.06e-09,23;UBERON:0005562,1.06e-09,23;UBERON:0007690,1.06e-09,23;UBERON:0006562,5.30e-09,24;UBERON:0001557,5.30e-09,24;UBERON:0001042,5.30e-09,24;UBERON:0008814,5.30e-09,24;UBERON:0009145,5.30e-09,24;UBERON:0000077,9.04e-09,35;UBERON:0002384,1.42e-07,46;UBERON:0000072,2.97e-07,27;UBERON:0003081,5.68e-07,87 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,15.8821687833139,61.1023054138234,55.0051636856685,10.4442960617558,8.77493748948701,20.3728868618135,18.9702273249224,2.99798785634096,2.83465374345756,1.39912375625629,4.57420139769445,5.75880621144103,5.51706547337439,1.53077922271926,1.09220046320974,1.04479915655574,0.47997726838022,0.91763712426868,0,0,0.215471232685889,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,5.4409111995798,4.6880120671428,6.28228492768558,1.76469446409304,2.04913645487534,6.79714494243615,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,6.04017381807851,26.1130371124084,31.5928171193916,0.257259436035947,1.14613375975503,0,0,0,0.633831403506179,0,0,0.899899717281399,1.97773272513395,0,0.299600110518405,0,0.207379224616955,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,4.40463523997555,3.83062014255563,5.22262213071228,0,0.0914876436024097,0.52091337055676,1.95428099300967,1.12552522006336,4.12555268997387,1.17851434189467,1.13897344639282,0,0.757261933331841,0.831287161174641,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,28.7421050848361,2.07818994690755,0.693941307064543,0.608930956624282,0.461230994512117,0.753613202763113,0.705532242814229,0.628332956648377,0,0.289198713839823,9.73071607144862,1.61766849947409,3.5334642953663,2.42437626567611,0,1.75668478206928,0.83778682725382,0.255457055208591,26.1196971422906,16.197373736822,19.0605340609597,4.19413790333504,2.28750301409313,0.376963056338593,1.73824320192276,0.511430914660661,4.77912502486988,3.0825839982874,0.509196819251581,4.10543003013307,0.252722758433675,0.210441855886474,0.520481771850815,0.229902104433473,0.720248519221397,0.150704817835715,0.680364991513279,0.12811372028485,0.468508622798644,0.258703370739016,0.646703978798527,0.189106080167819,0,0,1.11218899690239,1.74126083261083,1.02891068203972,0.199034266818493,14.7464769335779,12.610047448621,16.76564646434,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0,0.462801338662135,0,0.268273401399619,0.350296027101508,0.822799249567402,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,3.57492912559016,0.205809224758569,1.65209391491899,0.528901133327089,0.213288250535234,0.232236671860439,0.644337306610467,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.571242563048644,0,0,0.193952487167626,0.49095073923223,1.01178459398812,0.442830443938806,0.470996183524124,0,0,0,0.196558995113203,0.224862112384854,1.21716072833102,0.72353147925725,0.763877555344259,1.15078454980324,1.29708181420028,0.823684239564244,0,0,1.24815069245824,0.505157755894224,0,0.482443521363367,2.95605104266567,0.568474235311454,0.325929952884052,0,0,0.670025029767263,0.476087281772027,1.75620283072019,1.10344600874334,0.664394068946325,2.07291199254733,1.3109065177259,1.89953480052485,2.31438493730419,7.53956419696361,5.4390568381871,0,1.37968373152366,4.65596710964597,5.62616095642575,0,0,2.2085575359138,2.34263246577983,0.430846795465598,2.15071918157297,0.891194696329576,2.54768877709949,1.61924280669958,3.21481443702443,3.55759000151871,2.24924921495265,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.258428293168221,1.09060118843252,0.356497378384721,0.948110273807448,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0.938686832254841,0,0.220528398054962,0.16488625294148,1.13025098687134,1.02531972377865,0.238744688006273,0.164140899745061,0.291480836629851,5.37733375830478,4.61351378154202,2.27025554759545,2.40752885580625,2.63715839806567,1.77702496037333,2.74533807847827,12.2384469595576,14.5549510416604,14.3727972756601,0,0.316335993581135,0.813277868507395,0.432021363287205,0.418176592028937,0.436725127492355,0.134864346384821,0.743881101528023,0,0.259229946583586,1.24267862617385,0,0.448549638131936,0,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.104859344425711,0,0,3.79213344753814,0.608175645870493,1.64337531463724,1.68897069871134,2.68540043501222,3.77494574084403,3.12508168751919,2.80610101631697,3.12995994839258,3.50551310612999,3.42809029465258,4.19068887180935,4.71438024037614,4.9088298916259,0,0,0,0,0.579568782096571,0.93841237725591,0.73260649706906,0.214368379079066,0,0.564751842617067,0.920650473014354,0,0.515559547031063,3.42541259885321,3.0215755895588,2.70009000092722,1.80128481289688,1.35942722695261,1.55328093525546,0.103787347584177,0,0.341467211508268,1.21553358534147,0,0.367687016900028,0.888986911206461,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,1.68554713445788,1.28050304809739,1.09127391015665,0,1.0429589335037,1.15745532278223,0.824171801606613,0.441596760403192,1.37147700954166,0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| |||
|short_description=p5@Dock10 | |||
}} |
Revision as of 21:03, 13 September 2013
Short description: | p5@Dock10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dock10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1398 |
Association with transcript: | 53bp_to_ENSMUST00000077946, ENSMUST00000097681, ENSMUST00000166732, ENSMUST00000169279, NM_175291, uc007brg.2, uc007bri.2_5end |
EntrezGene: | Dock10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.30e-17 | 45 |
blood island | 3.30e-17 | 45 |
hemolymphoid system | 1.06e-16 | 48 |
immune system | 1.06e-16 | 48 |
hemopoietic organ | 1.81e-12 | 29 |
immune organ | 1.81e-12 | 29 |
gland of gut | 6.83e-10 | 24 |
thymus | 1.06e-09 | 23 |
neck | 1.06e-09 | 23 |
respiratory system epithelium | 1.06e-09 | 23 |
hemolymphoid system gland | 1.06e-09 | 23 |
pharyngeal epithelium | 1.06e-09 | 23 |
thymic region | 1.06e-09 | 23 |
pharyngeal gland | 1.06e-09 | 23 |
entire pharyngeal arch endoderm | 1.06e-09 | 23 |
thymus primordium | 1.06e-09 | 23 |
early pharyngeal endoderm | 1.06e-09 | 23 |
pharynx | 5.30e-09 | 24 |
upper respiratory tract | 5.30e-09 | 24 |
chordate pharynx | 5.30e-09 | 24 |
pharyngeal arch system | 5.30e-09 | 24 |
pharyngeal region of foregut | 5.30e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 9.04e-09 | 35 |
connective tissue | 1.42e-07 | 46 |
segment of respiratory tract | 2.97e-07 | 27 |
lateral plate mesoderm | 5.68e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.