FFCP PHASE1:Mm9::chr2:129419118..129419150,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19261|HGNC=|MCL_coexpression_id=2|UniProt=E0CYM8|association_with_transcript=-140bp_to_ENSMUST00000049262_5end|description=CAGE_peak_4_at_Sirpa_5end|id=chr2:129419118..129419150,+|ontology_enrichment_celltype=CL:0000055!5.70e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.22e-22!63;UBERON:0004121!1.05e-21!102;UBERON:0000924!1.05e-21!102;UBERON:0006601!1.05e-21!102;UBERON:0001017!1.14e-20!73;UBERON:0005743!1.14e-20!73;UBERON:0000955!4.36e-20!50;UBERON:0006238!4.36e-20!50;UBERON:0000073!1.20e-19!75;UBERON:0001016!1.20e-19!75;UBERON:0001049!1.66e-19!52;UBERON:0005068!1.66e-19!52;UBERON:0006241!1.66e-19!52;UBERON:0007135!1.66e-19!52;UBERON:0002616!1.98e-19!49;UBERON:0002346!7.83e-18!71;UBERON:0003075!7.83e-18!71;UBERON:0007284!7.83e-18!71;UBERON:0003056!4.18e-16!49;UBERON:0003080!3.12e-15!40;UBERON:0002780!1.19e-14!39;UBERON:0001890!1.19e-14!39;UBERON:0006240!1.19e-14!39;UBERON:0002020!1.19e-14!34;UBERON:0002791!1.31e-13!29;UBERON:0003528!1.31e-13!29;UBERON:0001893!1.31e-13!29;UBERON:0004111!6.60e-12!122;UBERON:0000025!1.78e-10!114;UBERON:0000956!2.25e-10!21;UBERON:0001869!2.25e-10!21;UBERON:0000203!2.25e-10!21;UBERON:0002619!2.19e-09!17;UBERON:0007811!3.36e-08!86;UBERON:0002021!5.85e-08!10;UBERON:0000411!5.85e-08!10;UBERON:0001950!5.85e-08!10;UBERON:0000153!6.63e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.30e-23,95;UBERON:0000924,6.30e-23,95;UBERON:0006601,6.30e-23,95;UBERON:0010371,3.77e-22,73;UBERON:0000073,2.21e-21,54;UBERON:0001017,5.02e-21,73;UBERON:0002346,2.32e-20,64;UBERON:0003075,2.32e-20,64;UBERON:0007284,2.32e-20,64;UBERON:0001049,3.73e-20,52;UBERON:0005068,3.73e-20,52;UBERON:0006241,3.73e-20,52;UBERON:0007135,3.73e-20,52;UBERON:0001016,6.87e-20,75;UBERON:0000955,4.80e-19,47;UBERON:0006238,4.80e-19,47;UBERON:0002616,2.24e-18,46;UBERON:0003056,2.27e-16,49;UBERON:0010314,5.34e-16,92;UBERON:0003080,1.00e-15,40;UBERON:0002780,4.00e-15,39;UBERON:0001890,4.00e-15,39;UBERON:0006240,4.00e-15,39;UBERON:0002020,4.00e-15,34;UBERON:0003528,4.81e-14,29;UBERON:0002791,4.81e-14,29;UBERON:0001893,4.81e-14,29;UBERON:0004111,3.24e-11,122;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0000025,7.33e-10,114;UBERON:0002619,1.14e-09,17;UBERON:0002021,3.43e-08,10;UBERON:0000411,3.43e-08,10;UBERON:0001950,3.43e-08,10|phase1_expression=3.20297694209588,0,0.454999239389536,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,7.05859308253879,0.397163804803541,0,2.87986361028132,1.60586496747019,0.57423196411502,0,0.646413698057667,0,0.252030129759931,1.10865255327652,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0.837063261473815,1.5626706890476,1.57057123192139,0.588231488031014,3.41522742479223,1.45653105909346,5.16176953699867,7.70464677268311,6.42413632565885,1.56478268869608,5.88667922227206,5.71184075109627,7.77719596297134,2.79972843250725,5.75010257459886,0,0,0,0,2.0057340795713,1.03134418455488,2.42779753031517,1.05798195854407,2.53532561402472,1.69422266034566,1.77858959222228,3.5995988691256,5.93319817540185,5.6838409195688,6.2916023208865,6.14749288514487,2.17748185847803,3.24014251996058,2.94454945891935,2.28520787523043,3.09215957332259,1.5923803897944,1.62937300731002,3.67687514644008,4.40463523997555,10.4703617229854,6.29786786350598,3.42904348098504,2.37867873366265,5.73004707612436,9.77140496504833,6.19038871034848,5.80633341551878,3.24091444021034,3.70166370077668,2.98239113320481,0.605809546665472,1.28471652181535,11.0148505706638,2.58127163094416,0.679971333707751,0,0.649776417447669,0.448026887097336,4.49422144421606,3.57903677413921,4.1565760736459,3.5333957451034,2.53518155598025,3.84979432242953,2.54805239706646,0,0.216491041011214,0.506719730950197,0,2.51204535381932,2.07150306917737,1.92974780784272,1.21439728736295,0.608930956624282,0.922461989024234,0.753613202763113,1.88141931417128,2.26199864393416,0.988779870937496,3.47038456607788,1.76922110389975,1.7794353494215,2.65009822152472,0,0,27.2286141220739,32.8831329697124,0.255457055208591,1.31796636956512,1.19980546198682,1.01656181658452,9.8861822007183,14.1825186873774,3.39266750704734,28.8548371519179,33.4987249102733,6.44142938134636,9.73447578406546,3.25885964321012,1.36847667671102,1.26361379216837,4.20883711772948,0.910843100738926,2.5289231487682,1.62055916824814,1.9591626318643,2.38127747029647,2.562274405697,4.96619140166563,4.13925393182425,0.862271971731369,1.32374256117473,1.75951124163949,1.97276159184817,0.278047249225598,2.43776516565517,2.26360350048738,0.796137067273973,1.40442637462647,1.28673953557358,1.13665399758237,0.621377317606506,0.938104239924385,1.2604344302271,1.18372367792605,1.77087808572663,0.771335564436891,1.86027155800326,0.536546802799238,1.16765342367169,2.79751744852917,1.80584210487005,3.40489000092594,4.23979963533464,4.17145219052996,3.22095405024892,17.24377578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| ||
|EntrezGene=19261 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=E0CYM8 | |||
|association_with_transcript=-140bp_to_ENSMUST00000049262_5end | |||
|description=CAGE_peak_4_at_Sirpa_5end | |||
|id=chr2:129419118..129419150,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.70e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.22e-22!63;UBERON:0004121!1.05e-21!102;UBERON:0000924!1.05e-21!102;UBERON:0006601!1.05e-21!102;UBERON:0001017!1.14e-20!73;UBERON:0005743!1.14e-20!73;UBERON:0000955!4.36e-20!50;UBERON:0006238!4.36e-20!50;UBERON:0000073!1.20e-19!75;UBERON:0001016!1.20e-19!75;UBERON:0001049!1.66e-19!52;UBERON:0005068!1.66e-19!52;UBERON:0006241!1.66e-19!52;UBERON:0007135!1.66e-19!52;UBERON:0002616!1.98e-19!49;UBERON:0002346!7.83e-18!71;UBERON:0003075!7.83e-18!71;UBERON:0007284!7.83e-18!71;UBERON:0003056!4.18e-16!49;UBERON:0003080!3.12e-15!40;UBERON:0002780!1.19e-14!39;UBERON:0001890!1.19e-14!39;UBERON:0006240!1.19e-14!39;UBERON:0002020!1.19e-14!34;UBERON:0002791!1.31e-13!29;UBERON:0003528!1.31e-13!29;UBERON:0001893!1.31e-13!29;UBERON:0004111!6.60e-12!122;UBERON:0000025!1.78e-10!114;UBERON:0000956!2.25e-10!21;UBERON:0001869!2.25e-10!21;UBERON:0000203!2.25e-10!21;UBERON:0002619!2.19e-09!17;UBERON:0007811!3.36e-08!86;UBERON:0002021!5.85e-08!10;UBERON:0000411!5.85e-08!10;UBERON:0001950!5.85e-08!10;UBERON:0000153!6.63e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.30e-23,95;UBERON:0000924,6.30e-23,95;UBERON:0006601,6.30e-23,95;UBERON:0010371,3.77e-22,73;UBERON:0000073,2.21e-21,54;UBERON:0001017,5.02e-21,73;UBERON:0002346,2.32e-20,64;UBERON:0003075,2.32e-20,64;UBERON:0007284,2.32e-20,64;UBERON:0001049,3.73e-20,52;UBERON:0005068,3.73e-20,52;UBERON:0006241,3.73e-20,52;UBERON:0007135,3.73e-20,52;UBERON:0001016,6.87e-20,75;UBERON:0000955,4.80e-19,47;UBERON:0006238,4.80e-19,47;UBERON:0002616,2.24e-18,46;UBERON:0003056,2.27e-16,49;UBERON:0010314,5.34e-16,92;UBERON:0003080,1.00e-15,40;UBERON:0002780,4.00e-15,39;UBERON:0001890,4.00e-15,39;UBERON:0006240,4.00e-15,39;UBERON:0002020,4.00e-15,34;UBERON:0003528,4.81e-14,29;UBERON:0002791,4.81e-14,29;UBERON:0001893,4.81e-14,29;UBERON:0004111,3.24e-11,122;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0000025,7.33e-10,114;UBERON:0002619,1.14e-09,17;UBERON:0002021,3.43e-08,10;UBERON:0000411,3.43e-08,10;UBERON:0001950,3.43e-08,10 | |||
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| |||
|short_description=p4@Sirpa | |||
}} |
Revision as of 22:03, 13 September 2013
Short description: | p4@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -140bp_to_ENSMUST00000049262_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.