FFCP PHASE1:Hg19::chr7:37723450..37723461,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54749|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17572|TSSclassifier=S|UniProt=D6RIH7|association_with_transcript=4bp_to_ENST00000476620_5end|description=CAGE_peak_13_at_EPDR1_5end|id=chr7:37723450..37723461,+|ontology_enrichment_celltype=CL:0000763!3.17e-48!112;CL:0000049!3.17e-48!112;CL:0000766!2.30e-45!76;CL:0000557!7.38e-38!71;CL:0000037!7.24e-37!172;CL:0000566!7.24e-37!172;CL:0000839!1.48e-36!70;CL:0002032!1.56e-34!165;CL:0000837!1.56e-34!165;CL:0000738!2.49e-34!140;CL:0000988!2.13e-33!182;CL:0002009!9.82e-33!65;CL:0002194!3.35e-32!63;CL:0000576!3.35e-32!63;CL:0000040!3.35e-32!63;CL:0000559!3.35e-32!63;CL:0002057!4.02e-25!42;CL:0002031!6.12e-23!124;CL:0000860!9.70e-23!45;CL:0002087!9.70e-21!119;CL:0000094!1.55e-08!8;CL:0000451!2.30e-08!10;CL:0000990!2.46e-08!8;CL:0002274!4.11e-08!5;CL:0000457!4.11e-08!5;CL:0002191!4.11e-08!5;CL:0000097!4.11e-08!5;CL:0000831!4.11e-08!5;CL:0002028!4.11e-08!5;CL:0000134!6.70e-07!358|ontology_enrichment_celltype_v019=CL:0000235;9.08e-28;6!CL:0000473;1.48e-22;39!CL:0000234;1.48e-22;39!CL:0000990;1.71e-17;8!CL:0000766;2.11e-14;69!CL:0002619;2.37e-14;3!CL:0000763;2.74e-14;100!CL:0000451;3.32e-14;10!CL:0000860;9.03e-13;33!CL:0002057;9.03e-13;33!CL:0000840;1.48e-12;5!CL:0000576;5.25e-12;48!CL:0000738;1.42e-09;136!CL:0000097;8.53e-09;5!CL:0000453;1.41e-08;5!CL:0000988;2.61e-08;177|ontology_enrichment_celltype_v019_2=CL:0000763,1.43e-49,108;CL:0000049,1.43e-49,108;CL:0000557,1.09e-46,67;CL:0000766,1.72e-46,72;CL:0000839,8.59e-44,66;CL:0002009,1.27e-40,61;CL:0002194,1.56e-38,59;CL:0000576,1.56e-38,59;CL:0000040,1.56e-38,59;CL:0000559,1.56e-38,59;CL:0000037,4.36e-31,168;CL:0002032,8.89e-31,161;CL:0000837,8.89e-31,161;CL:0000738,3.30e-29,136;CL:0000988,4.14e-29,177;CL:0000235,1.10e-27,6;CL:0000473,7.35e-27,48;CL:0000234,7.35e-27,48;CL:0002031,2.34e-23,120;CL:0002087,7.40e-19,115;CL:0000990,1.12e-17,8;CL:0002619,1.98e-14,3;CL:0000451,2.36e-14,10;CL:0000860,3.56e-13,42;CL:0002057,3.56e-13,42;CL:0000840,1.08e-12,5;CL:0001029,1.08e-12,5;CL:0000134,1.45e-10,354;CL:0002320,3.34e-10,361;CL:0000219,6.23e-09,386;CL:0000097,8.10e-09,5;CL:0002028,8.10e-09,5;CL:0000453,1.31e-08,5;CL:0000048,2.22e-07,427;CL:0000723,3.64e-07,433;CL:0000034,6.87e-07,441|ontology_enrichment_development_v019=CL:0000049;4.70e-12;108!CL:0002057;3.85e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.35e-38!102;UBERON:0003061!1.35e-38!102;UBERON:0002193!1.16e-34!112;UBERON:0002371!1.02e-31!80;UBERON:0001474!2.35e-28!86;UBERON:0004765!8.81e-23!101;UBERON:0001434!8.81e-23!101;UBERON:0002405!9.52e-23!115;UBERON:0003081!1.38e-10!216;UBERON:0007023!3.35e-09!115;UBERON:0002204!1.39e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-40,76;UBERON:0002390,4.82e-40,98;UBERON:0003061,4.82e-40,98;UBERON:0001474,4.65e-37,82;UBERON:0002193,1.05e-35,108;UBERON:0004765,3.19e-33,90;UBERON:0002405,5.95e-32,93;UBERON:0001434,2.79e-29,100;UBERON:0003081,1.03e-15,203;UBERON:0002204,5.29e-15,167;UBERON:0002384,1.04e-09,371;UBERON:0000926,1.21e-07,315;UBERON:0004120,1.21e-07,315;UBERON:0006603,1.21e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0.786728553697808,0.767658796194425,0.154816123316076,0,0.30120591877825,0,0,0,0,0,1.80490002723128,0.434021741431704,2.91090116511902,2.59114932815184,2.31818010870768,1.45398238779565,0.755751887377619,0,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,0.689491361473237,0,0,0.564727018627814,0.272906150057846,1.12361742222542,0.612167784741805,0.641858054152187,0,0.329851300186716,0.398927315243264,0.426224750532694,5.80418477257168,4.53908179752912,1.86846674698672,0,0.521482918420201,0,5.44859552370032,4.78760926783834,6.0127853613768,0,0.212604299965044,0.209658645508376,2.02191536063691,3.00353785683013,1.6072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.639933055772092,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,2.92092654289215,4.17911369518241,1.99436940778298,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,4.68008530278475,2.67536092119711,0,0,0,0,0,0,0.492663237895943,0.968532774145487,2.90259361757081,2.59415916150531,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,4.01805673145701,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17572 | |||
|TSSclassifier=S | |||
|UniProt=D6RIH7 | |||
|association_with_transcript=4bp_to_ENST00000476620_5end | |||
|description=CAGE_peak_13_at_EPDR1_5end | |||
|id=chr7:37723450..37723461,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.17e-48!112;CL:0000049!3.17e-48!112;CL:0000766!2.30e-45!76;CL:0000557!7.38e-38!71;CL:0000037!7.24e-37!172;CL:0000566!7.24e-37!172;CL:0000839!1.48e-36!70;CL:0002032!1.56e-34!165;CL:0000837!1.56e-34!165;CL:0000738!2.49e-34!140;CL:0000988!2.13e-33!182;CL:0002009!9.82e-33!65;CL:0002194!3.35e-32!63;CL:0000576!3.35e-32!63;CL:0000040!3.35e-32!63;CL:0000559!3.35e-32!63;CL:0002057!4.02e-25!42;CL:0002031!6.12e-23!124;CL:0000860!9.70e-23!45;CL:0002087!9.70e-21!119;CL:0000094!1.55e-08!8;CL:0000451!2.30e-08!10;CL:0000990!2.46e-08!8;CL:0002274!4.11e-08!5;CL:0000457!4.11e-08!5;CL:0002191!4.11e-08!5;CL:0000097!4.11e-08!5;CL:0000831!4.11e-08!5;CL:0002028!4.11e-08!5;CL:0000134!6.70e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.08e-28;6!CL:0000473;1.48e-22;39!CL:0000234;1.48e-22;39!CL:0000990;1.71e-17;8!CL:0000766;2.11e-14;69!CL:0002619;2.37e-14;3!CL:0000763;2.74e-14;100!CL:0000451;3.32e-14;10!CL:0000860;9.03e-13;33!CL:0002057;9.03e-13;33!CL:0000840;1.48e-12;5!CL:0000576;5.25e-12;48!CL:0000738;1.42e-09;136!CL:0000097;8.53e-09;5!CL:0000453;1.41e-08;5!CL:0000988;2.61e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.43e-49,108;CL:0000049,1.43e-49,108;CL:0000557,1.09e-46,67;CL:0000766,1.72e-46,72;CL:0000839,8.59e-44,66;CL:0002009,1.27e-40,61;CL:0002194,1.56e-38,59;CL:0000576,1.56e-38,59;CL:0000040,1.56e-38,59;CL:0000559,1.56e-38,59;CL:0000037,4.36e-31,168;CL:0002032,8.89e-31,161;CL:0000837,8.89e-31,161;CL:0000738,3.30e-29,136;CL:0000988,4.14e-29,177;CL:0000235,1.10e-27,6;CL:0000473,7.35e-27,48;CL:0000234,7.35e-27,48;CL:0002031,2.34e-23,120;CL:0002087,7.40e-19,115;CL:0000990,1.12e-17,8;CL:0002619,1.98e-14,3;CL:0000451,2.36e-14,10;CL:0000860,3.56e-13,42;CL:0002057,3.56e-13,42;CL:0000840,1.08e-12,5;CL:0001029,1.08e-12,5;CL:0000134,1.45e-10,354;CL:0002320,3.34e-10,361;CL:0000219,6.23e-09,386;CL:0000097,8.10e-09,5;CL:0002028,8.10e-09,5;CL:0000453,1.31e-08,5;CL:0000048,2.22e-07,427;CL:0000723,3.64e-07,433;CL:0000034,6.87e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000049;4.70e-12;108!CL:0002057;3.85e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-38!102;UBERON:0003061!1.35e-38!102;UBERON:0002193!1.16e-34!112;UBERON:0002371!1.02e-31!80;UBERON:0001474!2.35e-28!86;UBERON:0004765!8.81e-23!101;UBERON:0001434!8.81e-23!101;UBERON:0002405!9.52e-23!115;UBERON:0003081!1.38e-10!216;UBERON:0007023!3.35e-09!115;UBERON:0002204!1.39e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-40,76;UBERON:0002390,4.82e-40,98;UBERON:0003061,4.82e-40,98;UBERON:0001474,4.65e-37,82;UBERON:0002193,1.05e-35,108;UBERON:0004765,3.19e-33,90;UBERON:0002405,5.95e-32,93;UBERON:0001434,2.79e-29,100;UBERON:0003081,1.03e-15,203;UBERON:0002204,5.29e-15,167;UBERON:0002384,1.04e-09,371;UBERON:0000926,1.21e-07,315;UBERON:0004120,1.21e-07,315;UBERON:0006603,1.21e-07,315 | |||
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|short_description=p13@EPDR1 | |||
}} |
Revision as of 01:07, 14 September 2013
Short description: | p13@EPDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_EPDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000476620_5end |
EntrezGene: | EPDR1 |
HGNC: | 17572 |
UniProt: | D6RIH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-40 | 76 |
hematopoietic system | 4.82e-40 | 98 |
blood island | 4.82e-40 | 98 |
bone element | 4.65e-37 | 82 |
hemolymphoid system | 1.05e-35 | 108 |
skeletal element | 3.19e-33 | 90 |
immune system | 5.95e-32 | 93 |
skeletal system | 2.79e-29 | 100 |
lateral plate mesoderm | 1.03e-15 | 203 |
musculoskeletal system | 5.29e-15 | 167 |
connective tissue | 1.04e-09 | 371 |
mesoderm | 1.21e-07 | 315 |
mesoderm-derived structure | 1.21e-07 | 315 |
presumptive mesoderm | 1.21e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.