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FFCP PHASE1:Mm9::chr3:36589040..36589094,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22065|HGNC=|MCL_coexpression_id=39|UniProt=B1ATV3,E9Q8P9,Q8BNT8,Q8CCQ1|association_with_transcript=0bp_to_ENSMUST00000029271,ENSMUST00000146475,ENSMUST00000169246,NM_019510,uc008ozt.2,uc008ozv.1_5end|description=CAGE_peak_1_at_Trpc3_5end|id=chr3:36589040..36589094,-|ontology_enrichment_celltype=CL:0000117!1.45e-08!23;CL:0000337!1.45e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.09e-09,23;CL:0000337,7.09e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.58e-16!52;UBERON:0005068!1.58e-16!52;UBERON:0006241!1.58e-16!52;UBERON:0007135!1.58e-16!52;UBERON:0002346!1.89e-15!71;UBERON:0003075!1.89e-15!71;UBERON:0007284!1.89e-15!71;UBERON:0000955!3.36e-15!50;UBERON:0006238!3.36e-15!50;UBERON:0000033!9.60e-15!63;UBERON:0001017!1.11e-14!73;UBERON:0005743!1.11e-14!73;UBERON:0002616!1.19e-14!49;UBERON:0000073!9.96e-14!75;UBERON:0001016!9.96e-14!75;UBERON:0004121!1.58e-12!102;UBERON:0000924!1.58e-12!102;UBERON:0006601!1.58e-12!102;UBERON:0003080!4.04e-12!40;UBERON:0003056!5.78e-12!49;UBERON:0002780!1.40e-11!39;UBERON:0001890!1.40e-11!39;UBERON:0006240!1.40e-11!39;UBERON:0002020!6.69e-11!34;UBERON:0000468!7.31e-11!333;UBERON:0000025!1.75e-09!114;UBERON:0004111!3.91e-09!122;UBERON:0002791!6.23e-08!29;UBERON:0003528!6.23e-08!29;UBERON:0001893!6.23e-08!29;UBERON:0000922!3.73e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.88e-19,92;UBERON:0000073,3.45e-18,54;UBERON:0001049,9.96e-17,52;UBERON:0005068,9.96e-17,52;UBERON:0006241,9.96e-17,52;UBERON:0007135,9.96e-17,52;UBERON:0002346,1.83e-14,64;UBERON:0003075,1.83e-14,64;UBERON:0007284,1.83e-14,64;UBERON:0001017,3.49e-14,73;UBERON:0000955,1.31e-13,47;UBERON:0006238,1.31e-13,47;UBERON:0002616,4.68e-13,46;UBERON:0001016,5.22e-13,75;UBERON:0003080,2.72e-12,40;UBERON:0003056,3.72e-12,49;UBERON:0002780,9.88e-12,39;UBERON:0001890,9.88e-12,39;UBERON:0006240,9.88e-12,39;UBERON:0010371,2.55e-11,73;UBERON:0002020,5.14e-11,34;UBERON:0004121,2.05e-10,95;UBERON:0000924,2.05e-10,95;UBERON:0006601,2.05e-10,95;UBERON:0000025,4.47e-09,114;UBERON:0004111,1.78e-08,122;UBERON:0003528,6.00e-08,29;UBERON:0002791,6.00e-08,29;UBERON:0001893,6.00e-08,29;UBERON:0002021,7.26e-07,10;UBERON:0000411,7.26e-07,10;UBERON:0001950,7.26e-07,10|phase1_expression=8.0074423552397,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.872100625521786,0.878744730937887,1.74986909166855,0.419959264876088,1.43752564364972,0,0,0.336093799142464,0,0.573066879877513,0,5.86717736492834,5.81890077199236,12.0427966666174,0,0,0,0.988866362566974,0,1.79760066311043,1.92109152660777,6.11768712620018,5.8052553482627,6.09942387919008,18.5673139862472,15.2399293256613,2.20483438586917,1.91690942036473,1.83843757322004,11.0115880999389,18.0039146700115,11.981309593987,6.72620067423989,4.48289453651807,4.68822033501084,8.65467296904281,5.6276261003168,5.50073691996516,21.2132581541041,18.0812034614861,20.5039390407831,0.227178579999552,0.529000920747499,11.0148505706638,3.44169550792555,0,0,0,0.448026887097336,1.96622188184453,0,0,0,0.704217098883403,0,0,0,0,0,0,0.91347103775248,0.258937883647172,1.63286352971307,6.59244241711316,4.26251669636998,5.76538743140146,4.97384713823654,3.17489509266403,1.50799909595611,1.48316980640624,1.3013942122792,1.76922110389975,4.20593809863264,4.63767188766826,1.93950101254089,0,51.8222010710438,49.6388695147889,1.27728527604296,0,0,0.127070227073065,12.1330417917906,13.2675174817402,3.8952849154988,8.8650403298061,14.3200656104985,19.3242881440391,14.7639549391659,2.54598409625791,1.99051152976149,0.505445516867349,2.10441855886474,1.30120442962704,3.44853156650209,2.16074555766419,4.37043971723574,3.26575195926374,3.20284300712124,3.93547243150861,6.98499100995342,0.646703978798527,3.78212160335639,3.34307135911503,2.84954452155847,2.22437799380478,2.089512999133,4.52720700097476,2.18937693500343,0,0,0,2.27838349789052,3.98694301967864,3.06105504483725,4.49814997611899,7.67380503814875,6.17068451549513,4.18561100550734,5.90201483079162,5.13767506415546,6.25327429671226,12.6408947340903,16.1326930996253,13.5965988305559,12.2948064562988,14.6284996448805,2.94405927989778,3.08713837137853,0,0.793351699990633,1.49301775374664,2.09013004674395,3.09281907173024,3.02525286935014,5.11469500843202,5.1360919050391,1.89811624617805,2.79988223030818,6.53471542880701,4.57599885694647,5.45899443933536,3.59527763461689,1.08069024937347,1.39398891278057,5.50036912763937,7.19765629441292,7.88954149711563,6.31319116320474,10.2794818198842,6.24208797023835,5.88099795255593,2.36176236767363,3.61097074035162,1.97435462274881,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0.763877555344259,1.43848068725405,0.648540907100142,0,0,2.23284568601102,1.5601883655728,1.01031551178845,0.896987067609561,0.482443521363367,2.21703828199926,2.65287976478679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|EntrezGene=22065
|HGNC=
|MCL_coexpression_id=39
|UniProt=B1ATV3,E9Q8P9,Q8BNT8,Q8CCQ1
|association_with_transcript=0bp_to_ENSMUST00000029271,ENSMUST00000146475,ENSMUST00000169246,NM_019510,uc008ozt.2,uc008ozv.1_5end
|description=CAGE_peak_1_at_Trpc3_5end
|id=chr3:36589040..36589094,-
|ontology_enrichment_celltype=CL:0000117!1.45e-08!23;CL:0000337!1.45e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.09e-09,23;CL:0000337,7.09e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.58e-16!52;UBERON:0005068!1.58e-16!52;UBERON:0006241!1.58e-16!52;UBERON:0007135!1.58e-16!52;UBERON:0002346!1.89e-15!71;UBERON:0003075!1.89e-15!71;UBERON:0007284!1.89e-15!71;UBERON:0000955!3.36e-15!50;UBERON:0006238!3.36e-15!50;UBERON:0000033!9.60e-15!63;UBERON:0001017!1.11e-14!73;UBERON:0005743!1.11e-14!73;UBERON:0002616!1.19e-14!49;UBERON:0000073!9.96e-14!75;UBERON:0001016!9.96e-14!75;UBERON:0004121!1.58e-12!102;UBERON:0000924!1.58e-12!102;UBERON:0006601!1.58e-12!102;UBERON:0003080!4.04e-12!40;UBERON:0003056!5.78e-12!49;UBERON:0002780!1.40e-11!39;UBERON:0001890!1.40e-11!39;UBERON:0006240!1.40e-11!39;UBERON:0002020!6.69e-11!34;UBERON:0000468!7.31e-11!333;UBERON:0000025!1.75e-09!114;UBERON:0004111!3.91e-09!122;UBERON:0002791!6.23e-08!29;UBERON:0003528!6.23e-08!29;UBERON:0001893!6.23e-08!29;UBERON:0000922!3.73e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.88e-19,92;UBERON:0000073,3.45e-18,54;UBERON:0001049,9.96e-17,52;UBERON:0005068,9.96e-17,52;UBERON:0006241,9.96e-17,52;UBERON:0007135,9.96e-17,52;UBERON:0002346,1.83e-14,64;UBERON:0003075,1.83e-14,64;UBERON:0007284,1.83e-14,64;UBERON:0001017,3.49e-14,73;UBERON:0000955,1.31e-13,47;UBERON:0006238,1.31e-13,47;UBERON:0002616,4.68e-13,46;UBERON:0001016,5.22e-13,75;UBERON:0003080,2.72e-12,40;UBERON:0003056,3.72e-12,49;UBERON:0002780,9.88e-12,39;UBERON:0001890,9.88e-12,39;UBERON:0006240,9.88e-12,39;UBERON:0010371,2.55e-11,73;UBERON:0002020,5.14e-11,34;UBERON:0004121,2.05e-10,95;UBERON:0000924,2.05e-10,95;UBERON:0006601,2.05e-10,95;UBERON:0000025,4.47e-09,114;UBERON:0004111,1.78e-08,122;UBERON:0003528,6.00e-08,29;UBERON:0002791,6.00e-08,29;UBERON:0001893,6.00e-08,29;UBERON:0002021,7.26e-07,10;UBERON:0000411,7.26e-07,10;UBERON:0001950,7.26e-07,10
|phase1_expression=8.0074423552397,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.872100625521786,0.878744730937887,1.74986909166855,0.419959264876088,1.43752564364972,0,0,0.336093799142464,0,0.573066879877513,0,5.86717736492834,5.81890077199236,12.0427966666174,0,0,0,0.988866362566974,0,1.79760066311043,1.92109152660777,6.11768712620018,5.8052553482627,6.09942387919008,18.5673139862472,15.2399293256613,2.20483438586917,1.91690942036473,1.83843757322004,11.0115880999389,18.0039146700115,11.981309593987,6.72620067423989,4.48289453651807,4.68822033501084,8.65467296904281,5.6276261003168,5.50073691996516,21.2132581541041,18.0812034614861,20.5039390407831,0.227178579999552,0.529000920747499,11.0148505706638,3.44169550792555,0,0,0,0.448026887097336,1.96622188184453,0,0,0,0.704217098883403,0,0,0,0,0,0,0.91347103775248,0.258937883647172,1.63286352971307,6.59244241711316,4.26251669636998,5.76538743140146,4.97384713823654,3.17489509266403,1.50799909595611,1.48316980640624,1.3013942122792,1.76922110389975,4.20593809863264,4.63767188766826,1.93950101254089,0,51.8222010710438,49.6388695147889,1.27728527604296,0,0,0.127070227073065,12.1330417917906,13.2675174817402,3.8952849154988,8.8650403298061,14.3200656104985,19.3242881440391,14.7639549391659,2.54598409625791,1.99051152976149,0.505445516867349,2.10441855886474,1.30120442962704,3.44853156650209,2.16074555766419,4.37043971723574,3.26575195926374,3.20284300712124,3.93547243150861,6.98499100995342,0.646703978798527,3.78212160335639,3.34307135911503,2.84954452155847,2.22437799380478,2.089512999133,4.52720700097476,2.18937693500343,0,0,0,2.27838349789052,3.98694301967864,3.06105504483725,4.49814997611899,7.67380503814875,6.17068451549513,4.18561100550734,5.90201483079162,5.13767506415546,6.25327429671226,12.6408947340903,16.1326930996253,13.5965988305559,12.2948064562988,14.6284996448805,2.94405927989778,3.08713837137853,0,0.793351699990633,1.49301775374664,2.09013004674395,3.09281907173024,3.02525286935014,5.11469500843202,5.1360919050391,1.89811624617805,2.79988223030818,6.53471542880701,4.57599885694647,5.45899443933536,3.59527763461689,1.08069024937347,1.39398891278057,5.50036912763937,7.19765629441292,7.88954149711563,6.31319116320474,10.2794818198842,6.24208797023835,5.88099795255593,2.36176236767363,3.61097074035162,1.97435462274881,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0.763877555344259,1.43848068725405,0.648540907100142,0,0,2.23284568601102,1.5601883655728,1.01031551178845,0.896987067609561,0.482443521363367,2.21703828199926,2.65287976478679,1.46668478797823,1.52770577197669,2.11221223459652,2.84760637651087,6.18913466303636,3.51240566144038,2.99506773801763,4.87222317227305,4.9430978283821,2.78567635016755,1.55416483679306,1.15719246865209,0,0,0.983528546038072,0.827810238914197,9.63303539926752,9.37693492737625,0,7.57412781613119,0.631016438832513,0.390438744296638,0.861693590931196,0.955875191810208,0,0,1.61924280669958,1.75353514746787,1.18586333383957,11.5675673911851,4.11626247103979,1.06839362200353,3.25773918707152,7.4236555337641,1.32745138339963,0,1.51161778482376,1.50884063804718,0.885905678642318,0.922305443831782,2.84271122485043,1.45413491791002,1.06949213515416,2.52829406348653,1.05418608574999,0,1.70219802876894,6.84232157318979,8.02023839453078,11.1455258216428,9.04435191575595,11.2372355089304,8.88564711251453,4.26250928760439,0.938686832254841,1.69465656691056,3.30792597082443,0.49465875882444,2.26050197374268,1.20625849856312,0.477489376012546,1.14898629821543,1.7488850197791,6.11903496634682,0.854354403989263,1.03193433981611,0.740778109478847,0.376736914009382,0.820165366326151,0.686334519619568,0.169978429993855,0.139951452323658,0.276399947608848,0.954670618015114,2.05618395827738,2.84647253977588,2.80813886136683,1.88179466413022,2.40198820120795,4.45052343069908,3.96736587481612,1.57053565190418,3.88844919875379,0,0.56369293868419,4.18646328923141,2.48187735685646,5.05573089694524,2.45403664607689,3.54807863530634,2.58185925020659,7.29144555126121,4.92838918800841,0.483168241652012,1.44015003128933,0.316011120628178,1.01362607645082,1.1298205288131,1.03936658382236,1.79026695667481,0.39736270956253,0.480781798079875,0.147689527174577,0,0.381034033274999,0.403304740547362,0.0974578807397524,0,0.350630706544707,11.1097887971454,0.221985953374065,0.807424709485281,0,0.772758376128762,22.5218970541418,8.79127796482872,0.428736758158132,2.00628841614145,13.5540442228096,14.7304075682297,15.4681788628637,12.7171354934329,13.7016503954128,11.3309084608455,11.4753825039407,5.40385443869065,9.06284817968409,10.8729665467882,1.97195960409936,5.98537310101547,4.78054096111576,5.83456120963906,2.72497111416377,2.5738091183002,4.22268782823069,4.32673620201678,5.45562656306086,4.04315538822076,3.8021894983536,4.52703219326583,4.30750934361459,4.1616349063165,5.51380501973887,9.52587382566147,5.91010062318763,6.17309505483856,4.94503080963968,5.2991611248383,4.11443102862498,4.61437096014278,4.29185141905178,3.63366041580821,5.36423468367385,4.99226186560891,4.39027134894654,4.20911538300549,4.75314398460516,4.48913817326191,6.28765596058123,5.91026894253381,5.32000356120596,5.26785260032284,5.40138510747196,6.99469618226249,5.14649538579898,2.57845264857958,6.69509162240952,8.82365676478062,7.41977073985349
|short_description=p1@Trpc3
}}

Revision as of 02:10, 14 September 2013

Short description:p1@Trpc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trpc3_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000029271, ENSMUST00000146475, ENSMUST00000169246, NM_019510, uc008ozt.2, uc008ozv.1_5end
EntrezGene:Trpc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trpc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.50
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B251.82
cerebellum, neonate N30.CNhs11135.1395-42I249.64
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F219.32
diencephalon, neonate N30.CNhs11201.1388-42B214.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G112.64
heart, neonate N16.CNhs11209.782-15G116.13
heart, neonate N20.CNhs11127.821-26I613.60
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D214.63
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C710.28
kidney, neonate N00.CNhs11214.646-21G76.24
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C78.02
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I47.29
testis, neonate N10.CNhs11204.763-44D94.93
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F522.52
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.09e-0923
neuroblast (sensu Vertebrata)7.09e-0923

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest7.88e-1992
regional part of nervous system3.45e-1854
neural tube9.96e-1752
neural rod9.96e-1752
future spinal cord9.96e-1752
neural keel9.96e-1752
neurectoderm1.83e-1464
neural plate1.83e-1464
presumptive neural plate1.83e-1464
central nervous system3.49e-1473
brain1.31e-1347
future brain1.31e-1347
regional part of brain4.68e-1346
nervous system5.22e-1375
anterior neural tube2.72e-1240
pre-chordal neural plate3.72e-1249
regional part of forebrain9.88e-1239
forebrain9.88e-1239
future forebrain9.88e-1239
ecto-epithelium2.55e-1173
gray matter5.14e-1134
ectoderm-derived structure2.05e-1095
ectoderm2.05e-1095
presumptive ectoderm2.05e-1095
tube4.47e-09114
anatomical conduit1.78e-08122
brain grey matter6.00e-0829
regional part of telencephalon6.00e-0829
telencephalon6.00e-0829
occipital lobe7.26e-0710
visual cortex7.26e-0710
neocortex7.26e-0710







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