FFCP PHASE1:Mm9::chr4:125167652..125167700,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14807|HGNC=|MCL_coexpression_id=593|UniProt=B1AS29|association_with_transcript=-243bp_to_ENSMUST00000030676_5end|description=CAGE_peak_1_at_Grik3_5end|id=chr4:125167652..125167700,+|ontology_enrichment_celltype=CL:0000540!2.03e-22!33;CL:0000047!2.03e-22!33;CL:0000031!2.03e-22!33;CL:0000404!2.03e-22!33;CL:0000221!5.98e-19!44;CL:0000133!5.98e-19!44;CL:0002319!7.18e-19!43;CL:0000393!4.36e-16!39;CL:0000211!4.36e-16!39;CL:0000117!7.32e-16!23;CL:0000337!7.32e-16!23;CL:0000055!1.81e-13!50;CL:0000107!3.90e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-27,33;CL:0000047,1.76e-27,33;CL:0000031,1.76e-27,33;CL:0000404,1.76e-27,33;CL:0002319,4.41e-22,43;CL:0000221,3.06e-21,44;CL:0000133,3.06e-21,44;CL:0000393,4.57e-21,39;CL:0000211,4.57e-21,39;CL:0000117,8.97e-20,23;CL:0000337,8.97e-20,23;CL:0000107,6.20e-10,9;CL:0002321,2.32e-08,70;CL:0002609,3.90e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.18e-37!73;UBERON:0005743!4.18e-37!73;UBERON:0000073!4.55e-37!75;UBERON:0001016!4.55e-37!75;UBERON:0004121!3.26e-33!102;UBERON:0000924!3.26e-33!102;UBERON:0006601!3.26e-33!102;UBERON:0001049!1.35e-24!52;UBERON:0005068!1.35e-24!52;UBERON:0006241!1.35e-24!52;UBERON:0007135!1.35e-24!52;UBERON:0002346!6.38e-24!71;UBERON:0003075!6.38e-24!71;UBERON:0007284!6.38e-24!71;UBERON:0000033!4.70e-23!63;UBERON:0000955!4.91e-23!50;UBERON:0006238!4.91e-23!50;UBERON:0002616!2.53e-22!49;UBERON:0003056!2.60e-21!49;UBERON:0003080!1.15e-20!40;UBERON:0002780!3.52e-20!39;UBERON:0001890!3.52e-20!39;UBERON:0006240!3.52e-20!39;UBERON:0002020!1.42e-19!34;UBERON:0002791!3.75e-16!29;UBERON:0003528!3.75e-16!29;UBERON:0001893!3.75e-16!29;UBERON:0000956!2.94e-11!21;UBERON:0001869!2.94e-11!21;UBERON:0000203!2.94e-11!21;UBERON:0007811!1.90e-10!86;UBERON:0000153!2.97e-09!94;UBERON:0002619!1.36e-08!17;UBERON:0002410!3.90e-08!9;UBERON:0000010!1.19e-07!11;UBERON:0002021!8.68e-07!10;UBERON:0000411!8.68e-07!10;UBERON:0001950!8.68e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.44e-46,73;UBERON:0001016,4.33e-45,75;UBERON:0004121,7.53e-38,95;UBERON:0000924,7.53e-38,95;UBERON:0006601,7.53e-38,95;UBERON:0000073,8.67e-33,54;UBERON:0002346,7.34e-32,64;UBERON:0003075,7.34e-32,64;UBERON:0007284,7.34e-32,64;UBERON:0001049,4.34e-31,52;UBERON:0005068,4.34e-31,52;UBERON:0006241,4.34e-31,52;UBERON:0007135,4.34e-31,52;UBERON:0010371,3.64e-28,73;UBERON:0000955,4.41e-27,47;UBERON:0006238,4.41e-27,47;UBERON:0002616,3.48e-26,46;UBERON:0003080,1.65e-25,40;UBERON:0002780,6.92e-25,39;UBERON:0001890,6.92e-25,39;UBERON:0006240,6.92e-25,39;UBERON:0002020,4.25e-24,34;UBERON:0003056,7.62e-23,49;UBERON:0003528,9.58e-20,29;UBERON:0002791,9.58e-20,29;UBERON:0001893,9.58e-20,29;UBERON:0010314,7.19e-16,92;UBERON:0000956,1.57e-13,21;UBERON:0001869,1.57e-13,21;UBERON:0000203,1.57e-13,21;UBERON:0002619,3.69e-10,17;UBERON:0002410,6.20e-10,9;UBERON:0000010,1.34e-08,11;UBERON:0002021,3.18e-08,10;UBERON:0000411,3.18e-08,10;UBERON:0001950,3.18e-08,10;UBERON:0002420,1.86e-07,8;UBERON:0007245,1.86e-07,8;UBERON:0010009,1.86e-07,8;UBERON:0010011,1.86e-07,8;UBERON:0000454,1.86e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,13.5552028775931,11.1088105647127,12.6766280701236,0,0,0,0,0,3.59520132622086,2.68952813725088,27.4777472617466,30.3763361246304,28.1835448210852,16.8534080798244,13.4729809980484,31.970098595103,39.3924885884951,36.7687514644008,7.70811166995721,7.15049093277051,7.0659005297872,34.8179799607712,31.1972864684217,22.3992749339407,8.93385596804419,5.06486349028512,10.8486755921535,22.9810296669461,15.6608848879013,22.927131836512,0.227178579999552,1.51143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0.691846491768175,0,0,0,0,0,0,0,0,0,0,10.8328894894272,9.84399522023239,0,0,0,0,6.5907881338122,9.15001205637253,25.2565247746857,11.8200537730748,9.71718737855256,8.10373373782284,6.97637431191358,0.203678727700633,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,1.35634336052144,3.46986145671772,4.86832137082429,10.3071897015702,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,4.41608891984667,12.0398396483763,0,0.264450566663544,0.639864751605702,2.09013004674395,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,4.97706828962155,4.45404409050372,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| ||
|EntrezGene=14807 | |||
|HGNC= | |||
|MCL_coexpression_id=593 | |||
|UniProt=B1AS29 | |||
|association_with_transcript=-243bp_to_ENSMUST00000030676_5end | |||
|description=CAGE_peak_1_at_Grik3_5end | |||
|id=chr4:125167652..125167700,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.03e-22!33;CL:0000047!2.03e-22!33;CL:0000031!2.03e-22!33;CL:0000404!2.03e-22!33;CL:0000221!5.98e-19!44;CL:0000133!5.98e-19!44;CL:0002319!7.18e-19!43;CL:0000393!4.36e-16!39;CL:0000211!4.36e-16!39;CL:0000117!7.32e-16!23;CL:0000337!7.32e-16!23;CL:0000055!1.81e-13!50;CL:0000107!3.90e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-27,33;CL:0000047,1.76e-27,33;CL:0000031,1.76e-27,33;CL:0000404,1.76e-27,33;CL:0002319,4.41e-22,43;CL:0000221,3.06e-21,44;CL:0000133,3.06e-21,44;CL:0000393,4.57e-21,39;CL:0000211,4.57e-21,39;CL:0000117,8.97e-20,23;CL:0000337,8.97e-20,23;CL:0000107,6.20e-10,9;CL:0002321,2.32e-08,70;CL:0002609,3.90e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.18e-37!73;UBERON:0005743!4.18e-37!73;UBERON:0000073!4.55e-37!75;UBERON:0001016!4.55e-37!75;UBERON:0004121!3.26e-33!102;UBERON:0000924!3.26e-33!102;UBERON:0006601!3.26e-33!102;UBERON:0001049!1.35e-24!52;UBERON:0005068!1.35e-24!52;UBERON:0006241!1.35e-24!52;UBERON:0007135!1.35e-24!52;UBERON:0002346!6.38e-24!71;UBERON:0003075!6.38e-24!71;UBERON:0007284!6.38e-24!71;UBERON:0000033!4.70e-23!63;UBERON:0000955!4.91e-23!50;UBERON:0006238!4.91e-23!50;UBERON:0002616!2.53e-22!49;UBERON:0003056!2.60e-21!49;UBERON:0003080!1.15e-20!40;UBERON:0002780!3.52e-20!39;UBERON:0001890!3.52e-20!39;UBERON:0006240!3.52e-20!39;UBERON:0002020!1.42e-19!34;UBERON:0002791!3.75e-16!29;UBERON:0003528!3.75e-16!29;UBERON:0001893!3.75e-16!29;UBERON:0000956!2.94e-11!21;UBERON:0001869!2.94e-11!21;UBERON:0000203!2.94e-11!21;UBERON:0007811!1.90e-10!86;UBERON:0000153!2.97e-09!94;UBERON:0002619!1.36e-08!17;UBERON:0002410!3.90e-08!9;UBERON:0000010!1.19e-07!11;UBERON:0002021!8.68e-07!10;UBERON:0000411!8.68e-07!10;UBERON:0001950!8.68e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.44e-46,73;UBERON:0001016,4.33e-45,75;UBERON:0004121,7.53e-38,95;UBERON:0000924,7.53e-38,95;UBERON:0006601,7.53e-38,95;UBERON:0000073,8.67e-33,54;UBERON:0002346,7.34e-32,64;UBERON:0003075,7.34e-32,64;UBERON:0007284,7.34e-32,64;UBERON:0001049,4.34e-31,52;UBERON:0005068,4.34e-31,52;UBERON:0006241,4.34e-31,52;UBERON:0007135,4.34e-31,52;UBERON:0010371,3.64e-28,73;UBERON:0000955,4.41e-27,47;UBERON:0006238,4.41e-27,47;UBERON:0002616,3.48e-26,46;UBERON:0003080,1.65e-25,40;UBERON:0002780,6.92e-25,39;UBERON:0001890,6.92e-25,39;UBERON:0006240,6.92e-25,39;UBERON:0002020,4.25e-24,34;UBERON:0003056,7.62e-23,49;UBERON:0003528,9.58e-20,29;UBERON:0002791,9.58e-20,29;UBERON:0001893,9.58e-20,29;UBERON:0010314,7.19e-16,92;UBERON:0000956,1.57e-13,21;UBERON:0001869,1.57e-13,21;UBERON:0000203,1.57e-13,21;UBERON:0002619,3.69e-10,17;UBERON:0002410,6.20e-10,9;UBERON:0000010,1.34e-08,11;UBERON:0002021,3.18e-08,10;UBERON:0000411,3.18e-08,10;UBERON:0001950,3.18e-08,10;UBERON:0002420,1.86e-07,8;UBERON:0007245,1.86e-07,8;UBERON:0010009,1.86e-07,8;UBERON:0010011,1.86e-07,8;UBERON:0000454,1.86e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,13.5552028775931,11.1088105647127,12.6766280701236,0,0,0,0,0,3.59520132622086,2.68952813725088,27.4777472617466,30.3763361246304,28.1835448210852,16.8534080798244,13.4729809980484,31.970098595103,39.3924885884951,36.7687514644008,7.70811166995721,7.15049093277051,7.0659005297872,34.8179799607712,31.1972864684217,22.3992749339407,8.93385596804419,5.06486349028512,10.8486755921535,22.9810296669461,15.6608848879013,22.927131836512,0.227178579999552,1.51143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0.691846491768175,0,0,0,0,0,0,0,0,0,0,10.8328894894272,9.84399522023239,0,0,0,0,6.5907881338122,9.15001205637253,25.2565247746857,11.8200537730748,9.71718737855256,8.10373373782284,6.97637431191358,0.203678727700633,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,1.35634336052144,3.46986145671772,4.86832137082429,10.3071897015702,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,4.41608891984667,12.0398396483763,0,0.264450566663544,0.639864751605702,2.09013004674395,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,4.97706828962155,4.45404409050372,0,0,39.7540356464483,41.3865068954437,48.9011112853454,22.2240982095873,27.1814382380521,30.5722653251939,35.6233417473907,27.4720506436633,31.6230222357219,21.8498495166829,2.55492153374884,1.95872164033981,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,9.53230896110606,1.62054984628179,3.88076051348264,2.7863814554107,5.49754724291048,4.45922044005176,7.73380396829969,6.08929898229199,0,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,1.20625849856312,2.50681922406587,2.1338316966858,0.874442509889552,2.96680483216816,0,0,0,0,0,0,0,0,0,0,2.21435195506795,2.03319467126849,1.18805874903981,0.627264888043406,0.436725127492355,0.134864346384821,0.165306911450672,0,0.518459893167171,0.621339313086926,0,0,0,0,0.516639293910924,0,0,0,0.838874755405687,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,2.88581739386284,1.52513556236109,0.671538465456314,0,0,0,0.214368379079066,0,7.90652579663893,11.5081309126794,10.3121192419091,10.3111909406213,10.2762377965596,6.0431511791176,12.1504050041725,11.2580300806055,9.06284817968409,16.5683299760582,0.31136204275253,5.1873233542134,5.46347538413229,4.37592090722929,2.30574478890781,1.65459157605013,4.00044110042907,3.09052585858341,4.49286893428541,4.80124702351215,3.29523089857312,4.14977951049368,4.40115085108447,3.52138338226781,3.27382173046996,3.81034953026459,2.78122382267653,3.08654752741928,2.88460130562315,3.67997300335993,2.40008476669791,1.77475806159337,4.05341522910446,2.76158191601424,4.32903149910521,3.63842813934209,1.64635175585495,2.10455769150274,3.53090695999241,3.36685362994643,2.49133538060766,2.65962102414021,3.27384834535751,3.71848418846318,3.2794123866794,8.74337022782811,1.63752125911786,2.14871054048298,0.382576664137687,0.661774257358546,0.695603506861264 | |||
|short_description=p1@Grik3 | |||
}} |
Revision as of 03:45, 14 September 2013
Short description: | p1@Grik3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grik3_5end |
Coexpression cluster: | MCL_coexpression_mm9:593 |
Association with transcript: | -243bp_to_ENSMUST00000030676_5end |
EntrezGene: | Grik3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.76e-27 | 33 |
neuronal stem cell | 1.76e-27 | 33 |
neuroblast | 1.76e-27 | 33 |
electrically signaling cell | 1.76e-27 | 33 |
neural cell | 4.41e-22 | 43 |
ectodermal cell | 3.06e-21 | 44 |
neurectodermal cell | 3.06e-21 | 44 |
electrically responsive cell | 4.57e-21 | 39 |
electrically active cell | 4.57e-21 | 39 |
CNS neuron (sensu Vertebrata) | 8.97e-20 | 23 |
neuroblast (sensu Vertebrata) | 8.97e-20 | 23 |
autonomic neuron | 6.20e-10 | 9 |
embryonic cell | 2.32e-08 | 70 |
neuron of cerebral cortex | 3.90e-07 | 6 |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.