FFCP PHASE1:Mm9::chr4:148681794..148681812,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16561|HGNC=|MCL_coexpression_id=1|UniProt=Q60575,A2AH75,Q3UY61,A2AH78,Q6PB45,A2AH79|association_with_transcript=0bp_to_ENSMUST00000060537,ENSMUST00000150230,NM_008441,NM_207682,uc008vvy.1,uc008vvz.1,uc008vwa.1,uc008vwb.1_5end|description=CAGE_peak_1_at_Kif1b_5end|id=chr4:148681794..148681812,-|ontology_enrichment_celltype=CL:0002319!1.41e-14!43;CL:0000221!1.92e-14!44;CL:0000133!1.92e-14!44;CL:0000540!5.02e-14!33;CL:0000047!5.02e-14!33;CL:0000031!5.02e-14!33;CL:0000404!5.02e-14!33;CL:0000117!6.61e-13!23;CL:0000337!6.61e-13!23;CL:0000055!1.11e-11!50;CL:0000393!8.02e-11!39;CL:0000211!8.02e-11!39;CL:0002321!5.80e-09!70;CL:0000220!5.80e-09!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-14,43;CL:0000221,1.92e-14,44;CL:0000133,1.92e-14,44;CL:0000540,5.02e-14,33;CL:0000047,5.02e-14,33;CL:0000031,5.02e-14,33;CL:0000404,5.02e-14,33;CL:0000117,6.61e-13,23;CL:0000337,6.61e-13,23;CL:0000393,8.02e-11,39;CL:0000211,8.02e-11,39;CL:0002321,5.80e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.70e-27!102;UBERON:0000924!5.70e-27!102;UBERON:0006601!5.70e-27!102;UBERON:0000073!1.62e-26!75;UBERON:0001016!1.62e-26!75;UBERON:0001017!3.26e-26!73;UBERON:0005743!3.26e-26!73;UBERON:0002346!3.19e-20!71;UBERON:0003075!3.19e-20!71;UBERON:0007284!3.19e-20!71;UBERON:0001049!3.85e-20!52;UBERON:0005068!3.85e-20!52;UBERON:0006241!3.85e-20!52;UBERON:0007135!3.85e-20!52;UBERON:0000033!7.85e-20!63;UBERON:0000955!2.51e-19!50;UBERON:0006238!2.51e-19!50;UBERON:0002020!4.40e-19!34;UBERON:0002616!6.58e-19!49;UBERON:0002791!1.55e-16!29;UBERON:0003528!1.55e-16!29;UBERON:0001893!1.55e-16!29;UBERON:0003080!2.96e-14!40;UBERON:0003056!3.51e-14!49;UBERON:0002780!1.01e-13!39;UBERON:0001890!1.01e-13!39;UBERON:0006240!1.01e-13!39;UBERON:0004111!3.74e-13!122;UBERON:0000025!3.14e-12!114;UBERON:0000956!3.93e-12!21;UBERON:0001869!3.93e-12!21;UBERON:0000203!3.93e-12!21;UBERON:0002619!4.55e-10!17;UBERON:0007811!1.47e-07!86;UBERON:0002021!2.64e-07!10;UBERON:0000411!2.64e-07!10;UBERON:0001950!2.64e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.72e-27,95;UBERON:0000924,2.72e-27,95;UBERON:0006601,2.72e-27,95;UBERON:0001016,1.62e-26,75;UBERON:0001017,3.26e-26,73;UBERON:0000073,1.38e-21,54;UBERON:0002346,6.70e-21,64;UBERON:0003075,6.70e-21,64;UBERON:0007284,6.70e-21,64;UBERON:0010371,1.18e-20,73;UBERON:0010314,2.18e-20,92;UBERON:0001049,3.85e-20,52;UBERON:0005068,3.85e-20,52;UBERON:0006241,3.85e-20,52;UBERON:0007135,3.85e-20,52;UBERON:0002020,4.40e-19,34;UBERON:0000955,3.28e-17,47;UBERON:0006238,3.28e-17,47;UBERON:0002616,8.42e-17,46;UBERON:0003528,1.55e-16,29;UBERON:0002791,1.55e-16,29;UBERON:0001893,1.55e-16,29;UBERON:0003080,2.96e-14,40;UBERON:0003056,3.51e-14,49;UBERON:0002780,1.01e-13,39;UBERON:0001890,1.01e-13,39;UBERON:0006240,1.01e-13,39;UBERON:0004111,3.74e-13,122;UBERON:0000025,3.14e-12,114;UBERON:0000956,3.93e-12,21;UBERON:0001869,3.93e-12,21;UBERON:0000203,3.93e-12,21;UBERON:0002619,4.55e-10,17;UBERON:0002021,2.64e-07,10;UBERON:0000411,2.64e-07,10;UBERON:0001950,2.64e-07,10|phase1_expression=34.4320021275307,58.6278684834127,68.2498859084304,55.6534148804567,54.0967388342055,28.7073554969332,28.0335168714631,13.6870722848071,32.09982865058,38.8547113694509,2.56826952338257,3.43020283679947,24.6529051100936,20.5437945684644,4.33042690360362,3.23960427823721,2.79824751251259,5.8360500591274,6.30726394586398,5.51706547337439,52.8118831838143,0.794327609607082,0,34.7183557461693,35.5584385654114,49.9581808780068,37.4762936658395,34.6908684624281,22.8028103347649,41.8370015401485,25.49900872536,0,0.61506478758457,0,10.9763615505484,10.6390173029435,11.2293145944303,20.5080499061085,9.37602413428561,18.3233310390829,24.7057224973026,22.5405010036287,22.8189865924642,17.877348152532,18.2478476195126,17.4369414553597,27.3836970521814,123.620263667713,65.0271100894037,131.823471572364,87.3515270942262,69.0012308951864,2.34895648480831,47.1485392307374,35.2898489099587,25.7259436035947,38.9685478316709,37.1283906439758,129.077902028423,101.56626802023,138.175245964347,23.3802727127701,17.7858959222228,5.39939830368839,13.8441290759376,4.2628806896766,21.2716078468067,39.5744854481201,146.306042967262,110.434857555323,137.762849685155,125.972084122077,102.262134460597,111.956590482468,98.7208351487835,98.3564101672722,248.861891058618,267.121911274213,248.381764275346,138.744374692164,138.878242988458,138.042043197541,213.295811237055,182.897848260296,200.012906339844,157.626293228412,143.083539203098,141.663578827228,49.0705732799033,68.6189765769612,33.9141451780963,38.7190744641624,69.3570760381906,84.1936978954995,81.8718285984063,118.279098193697,71.3457654269299,17.2134625803838,15.3273742715693,15.9002808529653,40.985435155014,39.7812079984385,35.6727335589304,28.4426681261332,14.0719176657289,9.88103475352884,12.6381111253696,53.7806073476772,27.188477782953,56.5564549836982,32.6152414320335,36.8403228757691,38.5127880417618,37.529937497603,53.1500956253386,53.6596344977714,12.1125534189843,95.2909762102218,37.1536431818947,88.8100006211276,79.5029466457417,68.8522859452015,27.9587641827183,204.068215517048,204.210539143119,33.7203312875341,2.39630249011841,3.59941638596045,2.66847476853436,156.681008817445,206.332771871201,119.120325802995,222.495129846114,221.449586048066,182.853479212413,189.335554000073,25.4598409625791,38.4417539185187,17.9433158487909,103.747834952032,20.2987891021818,24.8294272788151,44.1152218023106,46.7184935290717,57.0826227879641,54.0639899602066,67.5589434075645,126.764651662118,12.5029435901048,22.5036235399705,21.2900860238378,24.1115305670332,24.7462051810782,40.7455034830935,29.221063369928,21.2966665495788,2.1066395619397,2.05878325691772,3.40996199274711,25.6835957944022,20.6382932783365,29.7102401410675,30.7768156260773,31.679041311332,36.5613057543086,45.1115852815791,49.8988526603292,63.8706422748417,57.4313876198047,67.4728277365081,91.040273119996,81.1409930210594,84.9658946176366,94.8839380635828,215.967777175359,127.498814737933,43.6152793538613,31.9985185662889,15.5700422890721,18.5789337488351,19.5878541209582,17.7481501668541,17.123109376055,14.4571475845545,27.5226855695817,21.2461651593974,22.6201687920243,16.5133871794155,22.2259059315797,28.7622210769351,28.0979464837102,32.8583100869706,8.15571974098251,18.5082590427761,14.6520056375005,15.8848035719345,14.3524840504043,18.0950415317022,22.2592610677386,23.3224033807771,20.095837163696,24.1858441286729,77.3741356697459,7.67487486294033,13.562570662811,8.31989815823959,12.1716072833102,11.3353265083636,9.42115651591253,21.28951417136,18.159145398804,23.612281534175,40.2550978276593,37.2140947668503,47.7417639865278,59.8611940734655,56.1513904323585,84.9100597599526,49.1443485843168,21.2230381182943,22.6521317254416,20.708900464573,17.3670783733492,22.4458384972033,28.5652369063216,54.6374214001837,40.9851374676097,38.5348559988868,49.9093425897935,47.3564979528483,42.998560484608,47.0109440389913,13.5712155545345,9.79030230873677,40.324670387561,37.5273974974436,231.995602532359,226.570190182729,17.2131692645509,243.129502897811,65.3102014191651,68.7172189962084,71.0897212518236,57.1135427106599,59.4872459799992,67.6552908585309,63.1504694612835,72.7717086199167,85.7774478143956,89.3273259652624,38.6077031766491,21.7240036474051,27.2021222120472,37.4482179147656,66.3725691699814,16.5090832585387,12.9999129494843,27.724946724117,30.4160949667196,31.0509499423367,39.0226722684014,34.1721705708855,39.5712090007041,48.6696607221157,61.1427929734993,75.2889465711764,43.5762695364849,26.8291030106652,16.4285528404098,27.0064664139806,29.0837983173329,36.2088699732203,36.2007845324666,35.3179340972935,21.5897971418614,19.2767184486076,52.4857587370809,62.9865486236454,61.3564821444441,49.516911366016,43.4515332171417,56.6286104120461,26.2332752966866,267.939561405187,9.91051108627546,14.2406938894624,10.7412825874433,5.83942216714542,5.33107488111998,8.00723606222829,5.09935289981566,5.03825228365169,4.69879910935041,21.9574242143476,16.9239756565907,21.3485440483191,21.7090735051821,23.4178891536205,27.5136830320184,32.2325787859722,36.2022136076971,42.1427066594288,23.2010802192309,98.7929507808212,8.45539408026285,18.6895682554973,16.0494735743385,20.417374776125,23.3779280494693,21.1195156863473,31.4517399570621,24.6086287355066,21.2864469184193,6.76435538312817,25.63467055695,10.4283669807299,14.798940716182,12.3253148597793,9.22437843142345,11.8157619140538,6.95384741734427,7.3319224207181,7.67985541307802,7.97634954590366,5.41068327250499,7.25948532985252,5.75001496364539,6.44619338990207,6.07759891344159,145.560906280966,12.6531993423217,4.39597897386431,7.05115388729129,46.3655025677257,27.7770063667749,20.5129819179337,47.1610433973945,34.6084751784401,175.637823053908,203.003429299665,192.492892515637,225.471375234918,213.74574616844,198.668595013491,201.156705069078,201.743899044451,206.632938496797,183.804910671896,28.7490952808169,45.8878604411186,31.9271842760231,43.029888921088,43.3899246639923,60.3006707716046,66.0072781570797,59.3380964848015,60.6537306128531,66.7120639056425,65.3976593716819,63.5670770471077,55.9039799595198,67.5465357871371,64.8446444508874,69.5388789273288,75.9042334938803,60.9593136665308,82.8292660614646,64.473127018866,57.2591651483644,58.2120644202627,58.8937389169883,63.8070769015922,69.452722746514,64.3917166055658,58.71987929216,59.4537547849525,59.4822018644875,63.4090766973244,78.0618419257066,64.3234269912429,74.8892809000532,71.1160101043584,54.9783841296253,60.7039704389209,63.3954658887057,63.6018319982963,87.6100560875303,86.9130191330891,89.0372488782418|short_description=p1@Kif1b}} | ||
|EntrezGene=16561 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q60575,A2AH75,Q3UY61,A2AH78,Q6PB45,A2AH79 | |||
|association_with_transcript=0bp_to_ENSMUST00000060537,ENSMUST00000150230,NM_008441,NM_207682,uc008vvy.1,uc008vvz.1,uc008vwa.1,uc008vwb.1_5end | |||
|description=CAGE_peak_1_at_Kif1b_5end | |||
|id=chr4:148681794..148681812,- | |||
|ontology_enrichment_celltype=CL:0002319!1.41e-14!43;CL:0000221!1.92e-14!44;CL:0000133!1.92e-14!44;CL:0000540!5.02e-14!33;CL:0000047!5.02e-14!33;CL:0000031!5.02e-14!33;CL:0000404!5.02e-14!33;CL:0000117!6.61e-13!23;CL:0000337!6.61e-13!23;CL:0000055!1.11e-11!50;CL:0000393!8.02e-11!39;CL:0000211!8.02e-11!39;CL:0002321!5.80e-09!70;CL:0000220!5.80e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-14,43;CL:0000221,1.92e-14,44;CL:0000133,1.92e-14,44;CL:0000540,5.02e-14,33;CL:0000047,5.02e-14,33;CL:0000031,5.02e-14,33;CL:0000404,5.02e-14,33;CL:0000117,6.61e-13,23;CL:0000337,6.61e-13,23;CL:0000393,8.02e-11,39;CL:0000211,8.02e-11,39;CL:0002321,5.80e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.70e-27!102;UBERON:0000924!5.70e-27!102;UBERON:0006601!5.70e-27!102;UBERON:0000073!1.62e-26!75;UBERON:0001016!1.62e-26!75;UBERON:0001017!3.26e-26!73;UBERON:0005743!3.26e-26!73;UBERON:0002346!3.19e-20!71;UBERON:0003075!3.19e-20!71;UBERON:0007284!3.19e-20!71;UBERON:0001049!3.85e-20!52;UBERON:0005068!3.85e-20!52;UBERON:0006241!3.85e-20!52;UBERON:0007135!3.85e-20!52;UBERON:0000033!7.85e-20!63;UBERON:0000955!2.51e-19!50;UBERON:0006238!2.51e-19!50;UBERON:0002020!4.40e-19!34;UBERON:0002616!6.58e-19!49;UBERON:0002791!1.55e-16!29;UBERON:0003528!1.55e-16!29;UBERON:0001893!1.55e-16!29;UBERON:0003080!2.96e-14!40;UBERON:0003056!3.51e-14!49;UBERON:0002780!1.01e-13!39;UBERON:0001890!1.01e-13!39;UBERON:0006240!1.01e-13!39;UBERON:0004111!3.74e-13!122;UBERON:0000025!3.14e-12!114;UBERON:0000956!3.93e-12!21;UBERON:0001869!3.93e-12!21;UBERON:0000203!3.93e-12!21;UBERON:0002619!4.55e-10!17;UBERON:0007811!1.47e-07!86;UBERON:0002021!2.64e-07!10;UBERON:0000411!2.64e-07!10;UBERON:0001950!2.64e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.72e-27,95;UBERON:0000924,2.72e-27,95;UBERON:0006601,2.72e-27,95;UBERON:0001016,1.62e-26,75;UBERON:0001017,3.26e-26,73;UBERON:0000073,1.38e-21,54;UBERON:0002346,6.70e-21,64;UBERON:0003075,6.70e-21,64;UBERON:0007284,6.70e-21,64;UBERON:0010371,1.18e-20,73;UBERON:0010314,2.18e-20,92;UBERON:0001049,3.85e-20,52;UBERON:0005068,3.85e-20,52;UBERON:0006241,3.85e-20,52;UBERON:0007135,3.85e-20,52;UBERON:0002020,4.40e-19,34;UBERON:0000955,3.28e-17,47;UBERON:0006238,3.28e-17,47;UBERON:0002616,8.42e-17,46;UBERON:0003528,1.55e-16,29;UBERON:0002791,1.55e-16,29;UBERON:0001893,1.55e-16,29;UBERON:0003080,2.96e-14,40;UBERON:0003056,3.51e-14,49;UBERON:0002780,1.01e-13,39;UBERON:0001890,1.01e-13,39;UBERON:0006240,1.01e-13,39;UBERON:0004111,3.74e-13,122;UBERON:0000025,3.14e-12,114;UBERON:0000956,3.93e-12,21;UBERON:0001869,3.93e-12,21;UBERON:0000203,3.93e-12,21;UBERON:0002619,4.55e-10,17;UBERON:0002021,2.64e-07,10;UBERON:0000411,2.64e-07,10;UBERON:0001950,2.64e-07,10 | |||
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| |||
|short_description=p1@Kif1b | |||
}} |
Revision as of 04:27, 14 September 2013
Short description: | p1@Kif1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kif1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000060537, ENSMUST00000150230, NM_008441, NM_207682, uc008vvy.1, uc008vvz.1, uc008vwa.1, uc008vwb.1_5end |
EntrezGene: | Kif1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.40e-14 | 43 |
ectodermal cell | 1.92e-14 | 44 |
neurectodermal cell | 1.92e-14 | 44 |
neuron | 5.02e-14 | 33 |
neuronal stem cell | 5.02e-14 | 33 |
neuroblast | 5.02e-14 | 33 |
electrically signaling cell | 5.02e-14 | 33 |
CNS neuron (sensu Vertebrata) | 6.61e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.61e-13 | 23 |
electrically responsive cell | 8.02e-11 | 39 |
electrically active cell | 8.02e-11 | 39 |
embryonic cell | 5.80e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.