FFCP PHASE1:Mm9::chr4:154335024..154335039,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=15208|HGNC=|MCL_coexpression_id=763|UniProt=P70120,Q499J8|association_with_transcript=0bp_to_ENSMUST00000049621,NM_010419,uc008wck.1_5end|description=CAGE_peak_1_at_Hes5_5end|id=chr4:154335024..154335039,+|ontology_enrichment_celltype=CL:0000117!5.27e-15!23;CL:0000337!5.27e-15!23;CL:0000540!3.08e-12!33;CL:0000047!3.08e-12!33;CL:0000031!3.08e-12!33;CL:0000404!3.08e-12!33;CL:0000221!7.37e-12!44;CL:0000133!7.37e-12!44;CL:0002319!3.11e-11!43;CL:0000393!3.65e-08!39;CL:0000211!3.65e-08!39;CL:0000055!1.85e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-19,23;CL:0000337,5.96e-19,23;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0000221,1.70e-11,44;CL:0000133,1.70e-11,44;CL:0002319,9.12e-11,43;CL:0000393,4.23e-09,39;CL:0000211,4.23e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.74e-25!63;UBERON:0002346!7.93e-25!71;UBERON:0003075!7.93e-25!71;UBERON:0007284!7.93e-25!71;UBERON:0001017!2.34e-24!73;UBERON:0005743!2.34e-24!73;UBERON:0004121!2.03e-23!102;UBERON:0000924!2.03e-23!102;UBERON:0006601!2.03e-23!102;UBERON:0003056!2.55e-23!49;UBERON:0000073!8.41e-23!75;UBERON:0001016!8.41e-23!75;UBERON:0001049!2.55e-21!52;UBERON:0005068!2.55e-21!52;UBERON:0006241!2.55e-21!52;UBERON:0007135!2.55e-21!52;UBERON:0000955!4.35e-20!50;UBERON:0006238!4.35e-20!50;UBERON:0002616!1.80e-19!49;UBERON:0002020!1.57e-18!34;UBERON:0003080!4.68e-18!40;UBERON:0002780!1.37e-17!39;UBERON:0001890!1.37e-17!39;UBERON:0006240!1.37e-17!39;UBERON:0002791!1.69e-15!29;UBERON:0003528!1.69e-15!29;UBERON:0001893!1.69e-15!29;UBERON:0007811!2.75e-13!86;UBERON:0000153!3.43e-12!94;UBERON:0000956!9.24e-11!21;UBERON:0001869!9.24e-11!21;UBERON:0000203!9.24e-11!21;UBERON:0002619!1.88e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0003056,1.96e-25,49;UBERON:0010371,2.12e-24,73;UBERON:0004121,2.33e-24,95;UBERON:0000924,2.33e-24,95;UBERON:0006601,2.33e-24,95;UBERON:0000073,3.46e-24,54;UBERON:0001017,3.76e-24,73;UBERON:0001016,6.09e-23,75;UBERON:0001049,1.37e-22,52;UBERON:0005068,1.37e-22,52;UBERON:0006241,1.37e-22,52;UBERON:0007135,1.37e-22,52;UBERON:0002020,3.72e-22,34;UBERON:0003080,2.33e-19,40;UBERON:0000955,2.68e-19,47;UBERON:0006238,2.68e-19,47;UBERON:0002780,9.05e-19,39;UBERON:0001890,9.05e-19,39;UBERON:0006240,9.05e-19,39;UBERON:0002616,1.48e-18,46;UBERON:0003528,2.89e-18,29;UBERON:0002791,2.89e-18,29;UBERON:0001893,2.89e-18,29;UBERON:0010314,4.00e-15,92;UBERON:0000956,3.25e-12,21;UBERON:0001869,3.25e-12,21;UBERON:0000203,3.25e-12,21;UBERON:0002619,2.73e-09,17;UBERON:0000020,1.76e-07,12;UBERON:0001032,1.76e-07,12;UBERON:0004456,1.76e-07,12;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8;UBERON:0002021,2.35e-07,10;UBERON:0000411,2.35e-07,10;UBERON:0001950,2.35e-07,10;UBERON:0000970,6.70e-07,9;UBERON:0000019,6.70e-07,9;UBERON:0000047,6.70e-07,9;UBERON:0010312,6.70e-07,9;UBERON:0004088,6.70e-07,9;UBERON:0002104,6.70e-07,9;UBERON:0001456,6.70e-07,9;UBERON:0003072,6.70e-07,9;UBERON:0004128,6.70e-07,9;UBERON:0003071,6.70e-07,9|phase1_expression=18.7374151112609,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,2.34064526321993,0,0.159544317990673,0,0,0.666219523631325,0.202475267389826,0,2.5236973228659,3.42786084014347,1.27316895539409,1.27564935226605,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,11.9913836009246,0.439372365468944,0.194429899074283,1.95980990275508,0,1.17447824240415,0,0,0,0,0,56.6486090406874,44.9642332381228,70.3552857891859,0.677689064138264,0.889294796111139,0,0,0,5.09320187881288,9.98967593836042,31.0031940802348,25.7861342213529,26.2906201689228,13.9968982357864,15.4607978666129,43.9741969181685,29.3287141315803,45.960939330501,8.8092704799511,9.44886301830389,9.67721159514334,29.6744147392936,20.4017445233374,34.9011958273029,10.3297709630511,19.6966913511088,15.4326230254578,26.5165726926301,20.6438937158699,27.4007185363192,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,46.1966416867512,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,9.13722900369418,16.9275223042892,29.5287727465231,10.7771078519211,9.71718737855256,11.2205544062162,14.9261962022337,0,0.248813941220186,0,0.210441855886474,38.645771559923,138.630968973384,99.7544199121635,92.2313485154576,135.052450815386,119.017646144625,122.749259173245,1.81092359517311,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0,0,0,9.04246778825747,32.929475961371,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,3.41402221715547,3.65595240351132,4.50830942692322,1.83286195060783,1.93952487167626,0.420814919341911,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.49541651965817,4.57125577709592,0,0,1.89304931649754,0.390438744296638,0.646270193198397,0,0.668396022247182,0,0,0.876767573733936,0.790575555893047,19.6006003017302,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,24.4883087882582,10.3486947026204,2.14337035031592,0.354680467284547,1.24858172321449,0.987294123612726,3.04464949114599,0,0,0,0.16488625294148,0.645857706783622,0.603129249281559,0.238744688006273,0,0.291480836629851,2.22510362412612,1.53783792718067,0.206386867963223,0,0.188368457004691,0.683471138605126,0.915112692826091,0.169978429993855,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.418176592028937,0.655087691238533,0,0,0,0,0,0,1.64468200648377,2.81279433777066,1.55560950675238,2.71235629303235,2.53434188236167,1.40828686374905,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,11.9684561491866,15.4681788628637,15.8104927756193,8.90607275701835,14.3524840504043,15.5255175053315,9.00642406448441,6.34399372577886,12.9440077937955,49.0914154073156,39.5034624667021,21.0002335077585,5.34834777550247,6.07878171621149,5.69914876195044,4.88942801163553,5.76898160268904,6.4183841918363,6.82282471762253,4.30914809813408,5.47016390019621,4.49479235855436,5.76226371643823,4.59483751644906,5.23923060411381,4.40360438590451,5.98018583437486,3.70877310722976,3.53277408322554,2.74295401908332,3.19456451086807,4.05341522910446,4.94177816549917,3.3879376949519,4.14611578669215,4.39027134894654,2.10455769150274,4.07412341537585,4.48913817326191,4.38949567059444,6.2057823896605,3.6830793885272,3.87342102964915,3.47231899766054,13.2399606307111,3.50897412668113,4.51229213501426,0.382576664137687,0.661774257358546,0.463735671240843|short_description=p1@Hes5}} | ||
|EntrezGene=15208 | |||
|HGNC= | |||
|MCL_coexpression_id=763 | |||
|UniProt=P70120,Q499J8 | |||
|association_with_transcript=0bp_to_ENSMUST00000049621,NM_010419,uc008wck.1_5end | |||
|description=CAGE_peak_1_at_Hes5_5end | |||
|id=chr4:154335024..154335039,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.27e-15!23;CL:0000337!5.27e-15!23;CL:0000540!3.08e-12!33;CL:0000047!3.08e-12!33;CL:0000031!3.08e-12!33;CL:0000404!3.08e-12!33;CL:0000221!7.37e-12!44;CL:0000133!7.37e-12!44;CL:0002319!3.11e-11!43;CL:0000393!3.65e-08!39;CL:0000211!3.65e-08!39;CL:0000055!1.85e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-19,23;CL:0000337,5.96e-19,23;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0000221,1.70e-11,44;CL:0000133,1.70e-11,44;CL:0002319,9.12e-11,43;CL:0000393,4.23e-09,39;CL:0000211,4.23e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.74e-25!63;UBERON:0002346!7.93e-25!71;UBERON:0003075!7.93e-25!71;UBERON:0007284!7.93e-25!71;UBERON:0001017!2.34e-24!73;UBERON:0005743!2.34e-24!73;UBERON:0004121!2.03e-23!102;UBERON:0000924!2.03e-23!102;UBERON:0006601!2.03e-23!102;UBERON:0003056!2.55e-23!49;UBERON:0000073!8.41e-23!75;UBERON:0001016!8.41e-23!75;UBERON:0001049!2.55e-21!52;UBERON:0005068!2.55e-21!52;UBERON:0006241!2.55e-21!52;UBERON:0007135!2.55e-21!52;UBERON:0000955!4.35e-20!50;UBERON:0006238!4.35e-20!50;UBERON:0002616!1.80e-19!49;UBERON:0002020!1.57e-18!34;UBERON:0003080!4.68e-18!40;UBERON:0002780!1.37e-17!39;UBERON:0001890!1.37e-17!39;UBERON:0006240!1.37e-17!39;UBERON:0002791!1.69e-15!29;UBERON:0003528!1.69e-15!29;UBERON:0001893!1.69e-15!29;UBERON:0007811!2.75e-13!86;UBERON:0000153!3.43e-12!94;UBERON:0000956!9.24e-11!21;UBERON:0001869!9.24e-11!21;UBERON:0000203!9.24e-11!21;UBERON:0002619!1.88e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0003056,1.96e-25,49;UBERON:0010371,2.12e-24,73;UBERON:0004121,2.33e-24,95;UBERON:0000924,2.33e-24,95;UBERON:0006601,2.33e-24,95;UBERON:0000073,3.46e-24,54;UBERON:0001017,3.76e-24,73;UBERON:0001016,6.09e-23,75;UBERON:0001049,1.37e-22,52;UBERON:0005068,1.37e-22,52;UBERON:0006241,1.37e-22,52;UBERON:0007135,1.37e-22,52;UBERON:0002020,3.72e-22,34;UBERON:0003080,2.33e-19,40;UBERON:0000955,2.68e-19,47;UBERON:0006238,2.68e-19,47;UBERON:0002780,9.05e-19,39;UBERON:0001890,9.05e-19,39;UBERON:0006240,9.05e-19,39;UBERON:0002616,1.48e-18,46;UBERON:0003528,2.89e-18,29;UBERON:0002791,2.89e-18,29;UBERON:0001893,2.89e-18,29;UBERON:0010314,4.00e-15,92;UBERON:0000956,3.25e-12,21;UBERON:0001869,3.25e-12,21;UBERON:0000203,3.25e-12,21;UBERON:0002619,2.73e-09,17;UBERON:0000020,1.76e-07,12;UBERON:0001032,1.76e-07,12;UBERON:0004456,1.76e-07,12;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8;UBERON:0002021,2.35e-07,10;UBERON:0000411,2.35e-07,10;UBERON:0001950,2.35e-07,10;UBERON:0000970,6.70e-07,9;UBERON:0000019,6.70e-07,9;UBERON:0000047,6.70e-07,9;UBERON:0010312,6.70e-07,9;UBERON:0004088,6.70e-07,9;UBERON:0002104,6.70e-07,9;UBERON:0001456,6.70e-07,9;UBERON:0003072,6.70e-07,9;UBERON:0004128,6.70e-07,9;UBERON:0003071,6.70e-07,9 | |||
|phase1_expression=18.7374151112609,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,2.34064526321993,0,0.159544317990673,0,0,0.666219523631325,0.202475267389826,0,2.5236973228659,3.42786084014347,1.27316895539409,1.27564935226605,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,11.9913836009246,0.439372365468944,0.194429899074283,1.95980990275508,0,1.17447824240415,0,0,0,0,0,56.6486090406874,44.9642332381228,70.3552857891859,0.677689064138264,0.889294796111139,0,0,0,5.09320187881288,9.98967593836042,31.0031940802348,25.7861342213529,26.2906201689228,13.9968982357864,15.4607978666129,43.9741969181685,29.3287141315803,45.960939330501,8.8092704799511,9.44886301830389,9.67721159514334,29.6744147392936,20.4017445233374,34.9011958273029,10.3297709630511,19.6966913511088,15.4326230254578,26.5165726926301,20.6438937158699,27.4007185363192,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,46.1966416867512,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,9.13722900369418,16.9275223042892,29.5287727465231,10.7771078519211,9.71718737855256,11.2205544062162,14.9261962022337,0,0.248813941220186,0,0.210441855886474,38.645771559923,138.630968973384,99.7544199121635,92.2313485154576,135.052450815386,119.017646144625,122.749259173245,1.81092359517311,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0,0,0,9.04246778825747,32.929475961371,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,3.41402221715547,3.65595240351132,4.50830942692322,1.83286195060783,1.93952487167626,0.420814919341911,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.49541651965817,4.57125577709592,0,0,1.89304931649754,0.390438744296638,0.646270193198397,0,0.668396022247182,0,0,0.876767573733936,0.790575555893047,19.6006003017302,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,24.4883087882582,10.3486947026204,2.14337035031592,0.354680467284547,1.24858172321449,0.987294123612726,3.04464949114599,0,0,0,0.16488625294148,0.645857706783622,0.603129249281559,0.238744688006273,0,0.291480836629851,2.22510362412612,1.53783792718067,0.206386867963223,0,0.188368457004691,0.683471138605126,0.915112692826091,0.169978429993855,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.418176592028937,0.655087691238533,0,0,0,0,0,0,1.64468200648377,2.81279433777066,1.55560950675238,2.71235629303235,2.53434188236167,1.40828686374905,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,11.9684561491866,15.4681788628637,15.8104927756193,8.90607275701835,14.3524840504043,15.5255175053315,9.00642406448441,6.34399372577886,12.9440077937955,49.0914154073156,39.5034624667021,21.0002335077585,5.34834777550247,6.07878171621149,5.69914876195044,4.88942801163553,5.76898160268904,6.4183841918363,6.82282471762253,4.30914809813408,5.47016390019621,4.49479235855436,5.76226371643823,4.59483751644906,5.23923060411381,4.40360438590451,5.98018583437486,3.70877310722976,3.53277408322554,2.74295401908332,3.19456451086807,4.05341522910446,4.94177816549917,3.3879376949519,4.14611578669215,4.39027134894654,2.10455769150274,4.07412341537585,4.48913817326191,4.38949567059444,6.2057823896605,3.6830793885272,3.87342102964915,3.47231899766054,13.2399606307111,3.50897412668113,4.51229213501426,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p1@Hes5 | |||
}} |
Revision as of 04:39, 14 September 2013
Short description: | p1@Hes5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hes5_5end |
Coexpression cluster: | MCL_coexpression_mm9:763 |
Association with transcript: | 0bp_to_ENSMUST00000049621, NM_010419, uc008wck.1_5end |
EntrezGene: | Hes5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.96e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.96e-19 | 23 |
neuron | 1.86e-12 | 33 |
neuronal stem cell | 1.86e-12 | 33 |
neuroblast | 1.86e-12 | 33 |
electrically signaling cell | 1.86e-12 | 33 |
ectodermal cell | 1.70e-11 | 44 |
neurectodermal cell | 1.70e-11 | 44 |
neural cell | 9.12e-11 | 43 |
electrically responsive cell | 4.23e-09 | 39 |
electrically active cell | 4.23e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.