FFCP PHASE1:Hg19::chr8:27238147..27238202,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2185|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9612|TSSclassifier=W|UniProt=C9JHV9|association_with_transcript=0bp_to_ENST00000412793,ENST00000496920_5end|description=CAGE_peak_3_at_PTK2B_5end|id=chr8:27238147..27238202,+|ontology_enrichment_celltype=CL:0000738!1.47e-72!140;CL:0002087!7.36e-67!119;CL:0000037!1.27e-63!172;CL:0000566!1.27e-63!172;CL:0002031!4.22e-63!124;CL:0000988!3.65e-61!182;CL:0002032!1.06e-58!165;CL:0000837!1.06e-58!165;CL:0000542!5.25e-43!53;CL:0000051!5.25e-43!53;CL:0000838!2.40e-42!52;CL:0002009!1.22e-23!65;CL:0000945!3.53e-23!24;CL:0000826!3.53e-23!24;CL:0002057!1.14e-22!42;CL:0000557!1.45e-22!71;CL:0002194!5.38e-22!63;CL:0000576!5.38e-22!63;CL:0000040!5.38e-22!63;CL:0000559!5.38e-22!63;CL:0000766!2.45e-21!76;CL:0000860!4.29e-21!45;CL:0000839!2.06e-20!70;CL:0000763!4.03e-20!112;CL:0000049!4.03e-20!112;CL:0000084!2.88e-18!25;CL:0000827!2.88e-18!25;CL:0000236!1.09e-14!14;CL:0000791!7.55e-14!18;CL:0000789!7.55e-14!18;CL:0002420!7.55e-14!18;CL:0002419!7.55e-14!18;CL:0000790!7.55e-14!18;CL:0000134!2.91e-10!358;CL:0000625!1.26e-09!11;CL:0002320!2.19e-09!365;CL:0000451!5.32e-09!10;CL:0000990!7.18e-08!8|ontology_enrichment_celltype_v019=CL:0000542;1.38e-33;53!CL:0000945;4.31e-32;24!CL:0000084;2.26e-23;25!CL:0000236;9.68e-19;13!CL:0002087;1.14e-17;104!CL:0000791;4.71e-17;18!CL:0000789;4.71e-17;18!CL:0002419;4.71e-17;18!CL:0000625;6.11e-13;11!CL:0000738;1.16e-12;136!CL:0000451;6.67e-09;10!CL:0000453;1.82e-08;5!CL:0000988;8.02e-08;177!CL:0000990;2.69e-07;8!CL:0000624;4.73e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-61,136;CL:0000542,2.81e-58,53;CL:0000051,2.81e-58,53;CL:0000838,2.44e-57,52;CL:0002087,1.73e-55,115;CL:0000037,1.65e-54,168;CL:0000988,5.52e-54,177;CL:0002032,1.06e-49,161;CL:0000837,1.06e-49,161;CL:0002031,2.16e-49,120;CL:0000945,3.65e-32,24;CL:0000826,3.65e-32,24;CL:0000084,2.32e-23,25;CL:0000827,2.32e-23,25;CL:0000236,3.97e-20,14;CL:0000791,4.22e-17,18;CL:0000789,4.22e-17,18;CL:0002420,4.22e-17,18;CL:0002419,4.22e-17,18;CL:0000790,4.22e-17,18;CL:0000625,5.79e-13,11;CL:0000134,4.44e-11,354;CL:0002320,2.24e-10,361;CL:0000860,1.87e-09,42;CL:0002057,1.87e-09,42;CL:0000763,3.27e-09,108;CL:0000049,3.27e-09,108;CL:0000451,6.16e-09,10;CL:0002009,1.06e-08,61;CL:0000453,1.83e-08,5;CL:0000473,3.05e-08,48;CL:0000234,3.05e-08,48;CL:0000219,5.62e-08,386;CL:0002194,2.32e-07,59;CL:0000576,2.32e-07,59;CL:0000040,2.32e-07,59;CL:0000559,2.32e-07,59;CL:0000990,2.46e-07,8;CL:0000557,2.77e-07,67;CL:0000766,3.66e-07,72;CL:0000624,4.43e-07,6|ontology_enrichment_development_v019=CL:0000051;1.38e-33;53!CL:0000790;4.71e-17;18!CL:0002057;6.33e-07;42|ontology_enrichment_disease=DOID:0060058!5.66e-09!10;DOID:2531!1.06e-07!51;DOID:0060083!1.06e-07!51|ontology_enrichment_disease_v019=DOID:0060058;4.47e-12;10|ontology_enrichment_disease_v019_2=DOID:0060058,4.83e-12,10;DOID:2531,3.55e-08,51;DOID:0060083,3.55e-08,51|ontology_enrichment_uberon=UBERON:0002390!4.33e-34!102;UBERON:0003061!4.33e-34!102;UBERON:0002193!5.28e-31!112;UBERON:0002371!1.07e-19!80;UBERON:0001474!5.88e-17!86;UBERON:0002405!4.42e-16!115;UBERON:0007023!3.85e-13!115;UBERON:0000178!9.65e-12!15;UBERON:0000179!9.65e-12!15;UBERON:0000463!9.65e-12!15;UBERON:0004765!9.90e-12!101;UBERON:0001434!9.90e-12!101;UBERON:0002384!3.17e-08!375;UBERON:0004177!9.07e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;6.07e-16;15!UBERON:0000179;6.07e-16;15!UBERON:0000463;6.07e-16;15!UBERON:0002390;1.41e-11;32!UBERON:0004177;1.63e-07;5!UBERON:0005057;1.63e-07;5!UBERON:0002193;4.46e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.75e-18,98;UBERON:0003061,1.75e-18,98;UBERON:0002193,1.76e-17,108;UBERON:0000178,5.91e-16,15;UBERON:0000179,5.91e-16,15;UBERON:0000463,5.91e-16,15;UBERON:0002384,1.97e-09,371;UBERON:0002405,8.73e-09,93;UBERON:0004177,4.36e-07,7;UBERON:0005057,4.36e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,43.1735742475925,37.5199693786252,34.6327437780189,1.57345710739562,4.60595277716655,2.63187409637329,0,0,0,15.1835713137391,8.24581548427045,0.587200878669695,12.1878989877013,8.82395568868623,12.3696196308036,0.895661896959697,2.59114932815184,0.77272670290256,0.726991193897824,0.755751887377619,0.485168122375632,1.16214518452842,0.411167888021826,2.47765096716083,0.575384784644301,1.2808035326455,0.236482229888585,15.8583013138845,20.0100251910986,44.6907405761328,0.752969358170419,0.818718450173537,0.449446968890169,7.03992952453076,8.34415470397843,7.03270838378945,0.659702600373432,0.797854630486527,0.852449501065388,3.48251086354301,4.53908179752912,4.9825779919646,1.50749199154046,1.5644487552606,0.868755378820466,10.8971910474006,18.0456041633907,18.3548184715713,1.69004229049553,0.850417199860174,1.04829322754188,0.561643155732475,0.450530678524519,0.16072558669708,1.71007646244749,0.39783335439818,0.91332076882317,49.2789484491704,61.7136630726209,58.7076107549946,64.0095333849761,64.864149899834,64.947025714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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9612 | |||
|TSSclassifier=W | |||
|UniProt=C9JHV9 | |||
|association_with_transcript=0bp_to_ENST00000412793,ENST00000496920_5end | |||
|description=CAGE_peak_3_at_PTK2B_5end | |||
|id=chr8:27238147..27238202,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-72!140;CL:0002087!7.36e-67!119;CL:0000037!1.27e-63!172;CL:0000566!1.27e-63!172;CL:0002031!4.22e-63!124;CL:0000988!3.65e-61!182;CL:0002032!1.06e-58!165;CL:0000837!1.06e-58!165;CL:0000542!5.25e-43!53;CL:0000051!5.25e-43!53;CL:0000838!2.40e-42!52;CL:0002009!1.22e-23!65;CL:0000945!3.53e-23!24;CL:0000826!3.53e-23!24;CL:0002057!1.14e-22!42;CL:0000557!1.45e-22!71;CL:0002194!5.38e-22!63;CL:0000576!5.38e-22!63;CL:0000040!5.38e-22!63;CL:0000559!5.38e-22!63;CL:0000766!2.45e-21!76;CL:0000860!4.29e-21!45;CL:0000839!2.06e-20!70;CL:0000763!4.03e-20!112;CL:0000049!4.03e-20!112;CL:0000084!2.88e-18!25;CL:0000827!2.88e-18!25;CL:0000236!1.09e-14!14;CL:0000791!7.55e-14!18;CL:0000789!7.55e-14!18;CL:0002420!7.55e-14!18;CL:0002419!7.55e-14!18;CL:0000790!7.55e-14!18;CL:0000134!2.91e-10!358;CL:0000625!1.26e-09!11;CL:0002320!2.19e-09!365;CL:0000451!5.32e-09!10;CL:0000990!7.18e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.38e-33;53!CL:0000945;4.31e-32;24!CL:0000084;2.26e-23;25!CL:0000236;9.68e-19;13!CL:0002087;1.14e-17;104!CL:0000791;4.71e-17;18!CL:0000789;4.71e-17;18!CL:0002419;4.71e-17;18!CL:0000625;6.11e-13;11!CL:0000738;1.16e-12;136!CL:0000451;6.67e-09;10!CL:0000453;1.82e-08;5!CL:0000988;8.02e-08;177!CL:0000990;2.69e-07;8!CL:0000624;4.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-61,136;CL:0000542,2.81e-58,53;CL:0000051,2.81e-58,53;CL:0000838,2.44e-57,52;CL:0002087,1.73e-55,115;CL:0000037,1.65e-54,168;CL:0000988,5.52e-54,177;CL:0002032,1.06e-49,161;CL:0000837,1.06e-49,161;CL:0002031,2.16e-49,120;CL:0000945,3.65e-32,24;CL:0000826,3.65e-32,24;CL:0000084,2.32e-23,25;CL:0000827,2.32e-23,25;CL:0000236,3.97e-20,14;CL:0000791,4.22e-17,18;CL:0000789,4.22e-17,18;CL:0002420,4.22e-17,18;CL:0002419,4.22e-17,18;CL:0000790,4.22e-17,18;CL:0000625,5.79e-13,11;CL:0000134,4.44e-11,354;CL:0002320,2.24e-10,361;CL:0000860,1.87e-09,42;CL:0002057,1.87e-09,42;CL:0000763,3.27e-09,108;CL:0000049,3.27e-09,108;CL:0000451,6.16e-09,10;CL:0002009,1.06e-08,61;CL:0000453,1.83e-08,5;CL:0000473,3.05e-08,48;CL:0000234,3.05e-08,48;CL:0000219,5.62e-08,386;CL:0002194,2.32e-07,59;CL:0000576,2.32e-07,59;CL:0000040,2.32e-07,59;CL:0000559,2.32e-07,59;CL:0000990,2.46e-07,8;CL:0000557,2.77e-07,67;CL:0000766,3.66e-07,72;CL:0000624,4.43e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.38e-33;53!CL:0000790;4.71e-17;18!CL:0002057;6.33e-07;42 | |||
|ontology_enrichment_disease=DOID:0060058!5.66e-09!10;DOID:2531!1.06e-07!51;DOID:0060083!1.06e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.47e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.83e-12,10;DOID:2531,3.55e-08,51;DOID:0060083,3.55e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.33e-34!102;UBERON:0003061!4.33e-34!102;UBERON:0002193!5.28e-31!112;UBERON:0002371!1.07e-19!80;UBERON:0001474!5.88e-17!86;UBERON:0002405!4.42e-16!115;UBERON:0007023!3.85e-13!115;UBERON:0000178!9.65e-12!15;UBERON:0000179!9.65e-12!15;UBERON:0000463!9.65e-12!15;UBERON:0004765!9.90e-12!101;UBERON:0001434!9.90e-12!101;UBERON:0002384!3.17e-08!375;UBERON:0004177!9.07e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.07e-16;15!UBERON:0000179;6.07e-16;15!UBERON:0000463;6.07e-16;15!UBERON:0002390;1.41e-11;32!UBERON:0004177;1.63e-07;5!UBERON:0005057;1.63e-07;5!UBERON:0002193;4.46e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.75e-18,98;UBERON:0003061,1.75e-18,98;UBERON:0002193,1.76e-17,108;UBERON:0000178,5.91e-16,15;UBERON:0000179,5.91e-16,15;UBERON:0000463,5.91e-16,15;UBERON:0002384,1.97e-09,371;UBERON:0002405,8.73e-09,93;UBERON:0004177,4.36e-07,7;UBERON:0005057,4.36e-07,7 | |||
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| |||
|short_description=p3@PTK2B | |||
}} |
Revision as of 04:54, 14 September 2013
Short description: | p3@PTK2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PTK2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412793, ENST00000496920_5end |
EntrezGene: | PTK2B |
HGNC: | 9612 |
UniProt: | C9JHV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.75e-18 | 98 |
blood island | 1.75e-18 | 98 |
hemolymphoid system | 1.76e-17 | 108 |
blood | 5.91e-16 | 15 |
haemolymphatic fluid | 5.91e-16 | 15 |
organism substance | 5.91e-16 | 15 |
connective tissue | 1.97e-09 | 371 |
immune system | 8.73e-09 | 93 |
hemopoietic organ | 4.36e-07 | 7 |
immune organ | 4.36e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.83e-12 | 10 |
hematologic cancer | 3.55e-08 | 51 |
immune system cancer | 3.55e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.