FFCP PHASE1:Mm9::chr5:130417772..130417810,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69568|HGNC=|MCL_coexpression_id=13|UniProt=Q0VGU5|association_with_transcript=-168bp_to_ENSMUST00000051758_5end|description=CAGE_peak_1_at_Vkorc1l1_5end|id=chr5:130417772..130417810,+|ontology_enrichment_celltype=CL:0000117!2.06e-13!23;CL:0000337!2.06e-13!23;CL:0000540!7.76e-09!33;CL:0000047!7.76e-09!33;CL:0000031!7.76e-09!33;CL:0000404!7.76e-09!33;CL:0000393!2.70e-07!39;CL:0000211!2.70e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,7.83e-14,23;CL:0000337,7.83e-14,23;CL:0000540,9.80e-09,33;CL:0000047,9.80e-09,33;CL:0000031,9.80e-09,33;CL:0000404,9.80e-09,33;CL:0000393,6.41e-07,39;CL:0000211,6.41e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.26e-24!52;UBERON:0005068!1.26e-24!52;UBERON:0006241!1.26e-24!52;UBERON:0007135!1.26e-24!52;UBERON:0000955!5.74e-23!50;UBERON:0006238!5.74e-23!50;UBERON:0000033!5.85e-23!63;UBERON:0002616!1.93e-22!49;UBERON:0001017!7.12e-22!73;UBERON:0005743!7.12e-22!73;UBERON:0002346!8.71e-22!71;UBERON:0003075!8.71e-22!71;UBERON:0007284!8.71e-22!71;UBERON:0000073!1.16e-20!75;UBERON:0001016!1.16e-20!75;UBERON:0003056!2.03e-19!49;UBERON:0003080!5.23e-19!40;UBERON:0007811!6.77e-19!86;UBERON:0002780!2.11e-18!39;UBERON:0001890!2.11e-18!39;UBERON:0006240!2.11e-18!39;UBERON:0004121!2.83e-18!102;UBERON:0000924!2.83e-18!102;UBERON:0006601!2.83e-18!102;UBERON:0000153!5.28e-18!94;UBERON:0002020!9.78e-18!34;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000956!7.19e-10!21;UBERON:0001869!7.19e-10!21;UBERON:0000203!7.19e-10!21;UBERON:0002619!4.97e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-26,54;UBERON:0001049,1.89e-25,52;UBERON:0005068,1.89e-25,52;UBERON:0006241,1.89e-25,52;UBERON:0007135,1.89e-25,52;UBERON:0002346,8.04e-25,64;UBERON:0003075,8.04e-25,64;UBERON:0007284,8.04e-25,64;UBERON:0001017,1.78e-22,73;UBERON:0010371,4.32e-22,73;UBERON:0000955,6.05e-22,47;UBERON:0006238,6.05e-22,47;UBERON:0002616,2.07e-21,46;UBERON:0001016,3.71e-21,75;UBERON:0003056,4.71e-20,49;UBERON:0003080,1.25e-19,40;UBERON:0004121,1.42e-19,95;UBERON:0000924,1.42e-19,95;UBERON:0006601,1.42e-19,95;UBERON:0010314,2.64e-19,92;UBERON:0002780,5.31e-19,39;UBERON:0001890,5.31e-19,39;UBERON:0006240,5.31e-19,39;UBERON:0002020,2.60e-18,34;UBERON:0003528,4.27e-15,29;UBERON:0002791,4.27e-15,29;UBERON:0001893,4.27e-15,29;UBERON:0000956,3.64e-10,21;UBERON:0001869,3.64e-10,21;UBERON:0000203,3.64e-10,21;UBERON:0002619,2.92e-08,17;UBERON:0000025,5.02e-07,114;UBERON:0002021,7.36e-07,10;UBERON:0000411,7.36e-07,10;UBERON:0001950,7.36e-07,10;UBERON:0004111,9.36e-07,122|phase1_expression=2.24208385946712,0,0,0,0,0.503637815735669,0.467225281191051,0.129123323441576,0.140788722151667,0.468129052643987,0.68487187290202,0.797721589953364,0.342401459862411,0.174840804837995,0,0.404950534779652,0.699561878128147,0.788655413395594,0.959801035240171,0,1.10556277196391,1.48936426801328,1.04479915655574,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0.190023419456374,0,0.443461021310609,1.27006134691926,0,0,0.866554859253824,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0.881277725829041,1.21652317463417,1.46837401729345,3.12956537739216,1.30815093828268,1.5378032791413,1.55543919259427,2.2397827460058,0,1.67782606057736,2.17608642603403,0.336093799142464,0.771778308107841,2.29226751951005,1.54701627683233,7.89034197352431,7.40587370980846,7.60597684207415,2.71075625655306,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,1.15265491596466,2.90330914463737,4.72520784160917,4.6271491497304,6.56997264128748,7.06779331045163,3.1847607795888,4.12135525378416,4.5960939330501,4.40463523997555,6.38436690425939,5.37622866396852,9.62769900430415,7.77644970620482,8.33461392890816,3.62937898701795,6.19038871034848,5.95913166329559,5.59794312399969,7.68807076315156,8.38797506213853,0.605809546665472,1.058001841495,0,0.860423876981386,0,0.539703191637817,0,0,1.40444420131752,0.852151612890289,2.07828803682295,2.82671659608272,2.95771181531029,3.84979432242953,2.54805239706646,7.11066703153331,0.649473123033642,0.253359865475099,0,0.5709193985953,0,1.63286352971307,2.4287945747259,1.21786191324856,0.922461989024234,1.20578112442098,1.64624189989987,1.0053327306374,1.23597483867187,0.722996784599558,0.884610551949874,3.07357014900077,0.883366073841574,1.45462575940567,0,3.80615036115011,2.93225389538837,0.766371165625774,0.239630249011841,0,0,5.99162557619291,8.6925114535539,8.92145900001337,10.6032835317289,10.4843337505436,4.1557608911912,5.353961681236,3.7680564624617,1.8661045591514,2.27450482590307,1.47309299120532,1.56144531555244,2.06911893990126,2.52086981727489,1.05493372485001,3.87808045162569,3.20284300712124,3.27956035959051,4.9153640440413,0.646703978798527,2.83659120251729,1.75951124163949,2.19195732427575,1.66828349535359,2.78601733217733,1.64625709126355,1.99034266818493,0,0,0.568326998791185,1.03562886267751,3.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| ||
|EntrezGene=69568 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q0VGU5 | |||
|association_with_transcript=-168bp_to_ENSMUST00000051758_5end | |||
|description=CAGE_peak_1_at_Vkorc1l1_5end | |||
|id=chr5:130417772..130417810,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.06e-13!23;CL:0000337!2.06e-13!23;CL:0000540!7.76e-09!33;CL:0000047!7.76e-09!33;CL:0000031!7.76e-09!33;CL:0000404!7.76e-09!33;CL:0000393!2.70e-07!39;CL:0000211!2.70e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.83e-14,23;CL:0000337,7.83e-14,23;CL:0000540,9.80e-09,33;CL:0000047,9.80e-09,33;CL:0000031,9.80e-09,33;CL:0000404,9.80e-09,33;CL:0000393,6.41e-07,39;CL:0000211,6.41e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-24!52;UBERON:0005068!1.26e-24!52;UBERON:0006241!1.26e-24!52;UBERON:0007135!1.26e-24!52;UBERON:0000955!5.74e-23!50;UBERON:0006238!5.74e-23!50;UBERON:0000033!5.85e-23!63;UBERON:0002616!1.93e-22!49;UBERON:0001017!7.12e-22!73;UBERON:0005743!7.12e-22!73;UBERON:0002346!8.71e-22!71;UBERON:0003075!8.71e-22!71;UBERON:0007284!8.71e-22!71;UBERON:0000073!1.16e-20!75;UBERON:0001016!1.16e-20!75;UBERON:0003056!2.03e-19!49;UBERON:0003080!5.23e-19!40;UBERON:0007811!6.77e-19!86;UBERON:0002780!2.11e-18!39;UBERON:0001890!2.11e-18!39;UBERON:0006240!2.11e-18!39;UBERON:0004121!2.83e-18!102;UBERON:0000924!2.83e-18!102;UBERON:0006601!2.83e-18!102;UBERON:0000153!5.28e-18!94;UBERON:0002020!9.78e-18!34;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000956!7.19e-10!21;UBERON:0001869!7.19e-10!21;UBERON:0000203!7.19e-10!21;UBERON:0002619!4.97e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-26,54;UBERON:0001049,1.89e-25,52;UBERON:0005068,1.89e-25,52;UBERON:0006241,1.89e-25,52;UBERON:0007135,1.89e-25,52;UBERON:0002346,8.04e-25,64;UBERON:0003075,8.04e-25,64;UBERON:0007284,8.04e-25,64;UBERON:0001017,1.78e-22,73;UBERON:0010371,4.32e-22,73;UBERON:0000955,6.05e-22,47;UBERON:0006238,6.05e-22,47;UBERON:0002616,2.07e-21,46;UBERON:0001016,3.71e-21,75;UBERON:0003056,4.71e-20,49;UBERON:0003080,1.25e-19,40;UBERON:0004121,1.42e-19,95;UBERON:0000924,1.42e-19,95;UBERON:0006601,1.42e-19,95;UBERON:0010314,2.64e-19,92;UBERON:0002780,5.31e-19,39;UBERON:0001890,5.31e-19,39;UBERON:0006240,5.31e-19,39;UBERON:0002020,2.60e-18,34;UBERON:0003528,4.27e-15,29;UBERON:0002791,4.27e-15,29;UBERON:0001893,4.27e-15,29;UBERON:0000956,3.64e-10,21;UBERON:0001869,3.64e-10,21;UBERON:0000203,3.64e-10,21;UBERON:0002619,2.92e-08,17;UBERON:0000025,5.02e-07,114;UBERON:0002021,7.36e-07,10;UBERON:0000411,7.36e-07,10;UBERON:0001950,7.36e-07,10;UBERON:0004111,9.36e-07,122 | |||
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| |||
|short_description=p1@Vkorc1l1 | |||
}} |
Revision as of 06:32, 14 September 2013
Short description: | p1@Vkorc1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vkorc1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -168bp_to_ENSMUST00000051758_5end |
EntrezGene: | Vkorc1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.83e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.83e-14 | 23 |
neuron | 9.80e-09 | 33 |
neuronal stem cell | 9.80e-09 | 33 |
neuroblast | 9.80e-09 | 33 |
electrically signaling cell | 9.80e-09 | 33 |
electrically responsive cell | 6.41e-07 | 39 |
electrically active cell | 6.41e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.