FFCP PHASE1:Hg19::chr9:115653148..115653163,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57864|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16055|TSSclassifier=S|UniProt=Q9BY10,B1ALK1|association_with_transcript=29bp_to_ENST00000374228,NM_033051,uc004bgk.2_5end|coexpression_cluster_id=C4790|description=CAGE_peak_1_at_SLC46A2_5end|id=chr9:115653148..115653163,-|ontology_enrichment_celltype=CL:0002057!1.24e-57!42;CL:0000860!7.06e-53!45;CL:0002194!4.87e-51!63;CL:0000576!4.87e-51!63;CL:0000040!4.87e-51!63;CL:0000559!4.87e-51!63;CL:0002009!5.21e-49!65;CL:0000766!1.47e-45!76;CL:0000839!1.93e-44!70;CL:0000557!1.32e-43!71;CL:0002087!2.77e-34!119;CL:0000738!4.06e-30!140;CL:0002031!7.80e-28!124;CL:0000763!6.47e-26!112;CL:0000049!6.47e-26!112;CL:0000037!3.49e-21!172;CL:0000566!3.49e-21!172;CL:0002032!1.34e-19!165;CL:0000837!1.34e-19!165;CL:0000988!4.59e-19!182;CL:0002393!4.03e-16!9;CL:0002397!4.03e-16!9;CL:0000875!8.32e-07!3;CL:0002396!8.32e-07!3|ontology_enrichment_celltype_v019=CL:0000860;4.27e-53;33!CL:0002057;4.27e-53;33!CL:0000576;1.85e-48;48!CL:0000473;7.61e-43;39!CL:0000234;7.61e-43;39!CL:0000766;3.69e-28;69!CL:0002393;3.92e-13;6!CL:0002397;3.92e-13;6!CL:0002087;4.40e-13;104!CL:0000763;1.35e-11;100!CL:0000875;1.09e-10;3!CL:0002396;1.09e-10;3!CL:0000226;5.55e-10;3!CL:0000842;5.55e-10;3!CL:0000738;5.97e-09;136|ontology_enrichment_celltype_v019_2=CL:0000860,4.87e-78,42;CL:0002057,4.87e-78,42;CL:0002194,2.73e-73,59;CL:0000576,2.73e-73,59;CL:0000040,2.73e-73,59;CL:0000559,2.73e-73,59;CL:0000473,3.36e-71,48;CL:0000234,3.36e-71,48;CL:0002009,1.38e-70,61;CL:0000839,1.56e-64,66;CL:0000557,1.98e-63,67;CL:0000766,2.30e-58,72;CL:0002087,4.54e-41,115;CL:0000763,1.23e-35,108;CL:0000049,1.23e-35,108;CL:0000738,4.57e-33,136;CL:0002031,7.19e-33,120;CL:0000037,1.03e-24,168;CL:0000988,6.56e-23,177;CL:0002393,5.70e-22,9;CL:0002397,5.70e-22,9;CL:0002032,6.56e-22,161;CL:0000837,6.56e-22,161;CL:0000875,9.46e-11,3;CL:0002396,9.46e-11,3;CL:0000226,6.10e-10,3;CL:0000842,6.10e-10,3;CL:0000134,7.42e-07,354|ontology_enrichment_development_v019=CL:0002057;2.02e-58;42!CL:0000049;1.64e-12;108!UBERON:0007297;1.20e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.16e-54!102;UBERON:0003061!1.16e-54!102;UBERON:0002193!1.91e-51!112;UBERON:0002371!5.04e-37!80;UBERON:0001474!2.09e-33!86;UBERON:0004765!3.56e-30!101;UBERON:0001434!3.56e-30!101;UBERON:0002405!8.58e-29!115;UBERON:0003081!1.03e-22!216;UBERON:0000178!3.79e-16!15;UBERON:0000179!3.79e-16!15;UBERON:0000463!3.79e-16!15;UBERON:0002204!1.21e-14!167;UBERON:0000926!9.21e-14!448;UBERON:0004120!9.21e-14!448;UBERON:0006603!9.21e-14!448;UBERON:0007023!3.68e-10!115;UBERON:0006947!7.04e-07!3;UBERON:0004054!7.04e-07!3|ontology_enrichment_uberon_v019=UBERON:0000178;3.24e-28;15!UBERON:0000179;3.24e-28;15!UBERON:0000463;3.24e-28;15!UBERON:0002390;8.50e-15;32!UBERON:0006947;7.65e-11;3!UBERON:0004054;7.65e-11;3!UBERON:0002193;2.58e-08;42!UBERON:0005904;3.22e-08;4!UBERON:0002370;1.95e-07;2!UBERON:0005058;1.95e-07;2!UBERON:0009113;1.95e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.14e-80,98;UBERON:0003061,1.14e-80,98;UBERON:0002193,4.17e-72,108;UBERON:0002371,8.71e-55,76;UBERON:0001474,4.56e-50,82;UBERON:0002405,3.35e-48,93;UBERON:0004765,9.56e-45,90;UBERON:0001434,2.78e-39,100;UBERON:0003081,1.25e-37,203;UBERON:0000178,4.83e-28,15;UBERON:0000179,4.83e-28,15;UBERON:0000463,4.83e-28,15;UBERON:0000926,6.57e-23,315;UBERON:0004120,6.57e-23,315;UBERON:0006603,6.57e-23,315;UBERON:0002204,1.57e-19,167;UBERON:0006947,7.07e-11,3;UBERON:0004054,7.07e-11,3;UBERON:0000923,4.28e-10,560;UBERON:0010316,4.28e-10,560;UBERON:0005291,4.28e-10,560;UBERON:0006598,4.28e-10,560;UBERON:0010317,4.28e-10,560;UBERON:0002532,4.28e-10,560;UBERON:0002050,6.33e-10,564;UBERON:0005423,3.15e-09,581;UBERON:0000922,8.51e-09,592;UBERON:0005904,3.04e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,1.40381113229099,1.30206522429511,0.447830948479849,1.29557466407592,1.03030227053675,11.341062624806,8.69114670484262,9.46077838632483,3.95129362739664,2.46700732813095,1.23882548358041,1.1507695692886,2.0492856522328,0.709446689665756,2.41321976515633,1.93645405075148,8.12558919566051,2.63539275359647,2.72906150057846,1.12361742222542,2.14258724659632,0.962787081228281,0,2.30895910130701,2.99195486432448,4.26224750532694,1.7412554317715,1.70215567407342,0,1.50749199154046,0,1.08594422352558,1.81619850790011,0.368277635987565,0.316462387440884,5.91514801673437,4.25208599930087,14.2567878945696,9.0986191228661,7.65902153491682,14.7867539761314,4.84521664360123,3.77941686678271,10.0465284570549,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.639933055772092,0,1.18388626022008,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0,0,3.5700213302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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16055 | |||
|TSSclassifier=S | |||
|UniProt=Q9BY10,B1ALK1 | |||
|association_with_transcript=29bp_to_ENST00000374228,NM_033051,uc004bgk.2_5end | |||
|coexpression_cluster_id=C4790 | |||
|description=CAGE_peak_1_at_SLC46A2_5end | |||
|id=chr9:115653148..115653163,- | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-57!42;CL:0000860!7.06e-53!45;CL:0002194!4.87e-51!63;CL:0000576!4.87e-51!63;CL:0000040!4.87e-51!63;CL:0000559!4.87e-51!63;CL:0002009!5.21e-49!65;CL:0000766!1.47e-45!76;CL:0000839!1.93e-44!70;CL:0000557!1.32e-43!71;CL:0002087!2.77e-34!119;CL:0000738!4.06e-30!140;CL:0002031!7.80e-28!124;CL:0000763!6.47e-26!112;CL:0000049!6.47e-26!112;CL:0000037!3.49e-21!172;CL:0000566!3.49e-21!172;CL:0002032!1.34e-19!165;CL:0000837!1.34e-19!165;CL:0000988!4.59e-19!182;CL:0002393!4.03e-16!9;CL:0002397!4.03e-16!9;CL:0000875!8.32e-07!3;CL:0002396!8.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-53;33!CL:0002057;4.27e-53;33!CL:0000576;1.85e-48;48!CL:0000473;7.61e-43;39!CL:0000234;7.61e-43;39!CL:0000766;3.69e-28;69!CL:0002393;3.92e-13;6!CL:0002397;3.92e-13;6!CL:0002087;4.40e-13;104!CL:0000763;1.35e-11;100!CL:0000875;1.09e-10;3!CL:0002396;1.09e-10;3!CL:0000226;5.55e-10;3!CL:0000842;5.55e-10;3!CL:0000738;5.97e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.87e-78,42;CL:0002057,4.87e-78,42;CL:0002194,2.73e-73,59;CL:0000576,2.73e-73,59;CL:0000040,2.73e-73,59;CL:0000559,2.73e-73,59;CL:0000473,3.36e-71,48;CL:0000234,3.36e-71,48;CL:0002009,1.38e-70,61;CL:0000839,1.56e-64,66;CL:0000557,1.98e-63,67;CL:0000766,2.30e-58,72;CL:0002087,4.54e-41,115;CL:0000763,1.23e-35,108;CL:0000049,1.23e-35,108;CL:0000738,4.57e-33,136;CL:0002031,7.19e-33,120;CL:0000037,1.03e-24,168;CL:0000988,6.56e-23,177;CL:0002393,5.70e-22,9;CL:0002397,5.70e-22,9;CL:0002032,6.56e-22,161;CL:0000837,6.56e-22,161;CL:0000875,9.46e-11,3;CL:0002396,9.46e-11,3;CL:0000226,6.10e-10,3;CL:0000842,6.10e-10,3;CL:0000134,7.42e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-58;42!CL:0000049;1.64e-12;108!UBERON:0007297;1.20e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-54!102;UBERON:0003061!1.16e-54!102;UBERON:0002193!1.91e-51!112;UBERON:0002371!5.04e-37!80;UBERON:0001474!2.09e-33!86;UBERON:0004765!3.56e-30!101;UBERON:0001434!3.56e-30!101;UBERON:0002405!8.58e-29!115;UBERON:0003081!1.03e-22!216;UBERON:0000178!3.79e-16!15;UBERON:0000179!3.79e-16!15;UBERON:0000463!3.79e-16!15;UBERON:0002204!1.21e-14!167;UBERON:0000926!9.21e-14!448;UBERON:0004120!9.21e-14!448;UBERON:0006603!9.21e-14!448;UBERON:0007023!3.68e-10!115;UBERON:0006947!7.04e-07!3;UBERON:0004054!7.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.24e-28;15!UBERON:0000179;3.24e-28;15!UBERON:0000463;3.24e-28;15!UBERON:0002390;8.50e-15;32!UBERON:0006947;7.65e-11;3!UBERON:0004054;7.65e-11;3!UBERON:0002193;2.58e-08;42!UBERON:0005904;3.22e-08;4!UBERON:0002370;1.95e-07;2!UBERON:0005058;1.95e-07;2!UBERON:0009113;1.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.14e-80,98;UBERON:0003061,1.14e-80,98;UBERON:0002193,4.17e-72,108;UBERON:0002371,8.71e-55,76;UBERON:0001474,4.56e-50,82;UBERON:0002405,3.35e-48,93;UBERON:0004765,9.56e-45,90;UBERON:0001434,2.78e-39,100;UBERON:0003081,1.25e-37,203;UBERON:0000178,4.83e-28,15;UBERON:0000179,4.83e-28,15;UBERON:0000463,4.83e-28,15;UBERON:0000926,6.57e-23,315;UBERON:0004120,6.57e-23,315;UBERON:0006603,6.57e-23,315;UBERON:0002204,1.57e-19,167;UBERON:0006947,7.07e-11,3;UBERON:0004054,7.07e-11,3;UBERON:0000923,4.28e-10,560;UBERON:0010316,4.28e-10,560;UBERON:0005291,4.28e-10,560;UBERON:0006598,4.28e-10,560;UBERON:0010317,4.28e-10,560;UBERON:0002532,4.28e-10,560;UBERON:0002050,6.33e-10,564;UBERON:0005423,3.15e-09,581;UBERON:0000922,8.51e-09,592;UBERON:0005904,3.04e-08,4 | |||
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|short_description=p1@SLC46A2 | |||
}} |
Revision as of 07:01, 14 September 2013
Short description: | p1@SLC46A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC46A2_5end |
Coexpression cluster: | C4790_CD14_ductus_CD14CD16_blood_lung_Whole_thymus |
Association with transcript: | 29bp_to_ENST00000374228, NM_033051, uc004bgk.2_5end |
EntrezGene: | SLC46A2 |
HGNC: | 16055 |
UniProt: | Q9BY10B1ALK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.87e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.87e-78 | 42 |
monopoietic cell | 2.73e-73 | 59 |
monocyte | 2.73e-73 | 59 |
monoblast | 2.73e-73 | 59 |
promonocyte | 2.73e-73 | 59 |
defensive cell | 3.36e-71 | 48 |
phagocyte | 3.36e-71 | 48 |
macrophage dendritic cell progenitor | 1.38e-70 | 61 |
myeloid lineage restricted progenitor cell | 1.56e-64 | 66 |
granulocyte monocyte progenitor cell | 1.98e-63 | 67 |
myeloid leukocyte | 2.30e-58 | 72 |
nongranular leukocyte | 4.54e-41 | 115 |
myeloid cell | 1.23e-35 | 108 |
common myeloid progenitor | 1.23e-35 | 108 |
leukocyte | 4.57e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 7.19e-33 | 120 |
hematopoietic stem cell | 1.03e-24 | 168 |
hematopoietic cell | 6.56e-23 | 177 |
intermediate monocyte | 5.70e-22 | 9 |
CD14-positive, CD16-positive monocyte | 5.70e-22 | 9 |
hematopoietic oligopotent progenitor cell | 6.56e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.56e-22 | 161 |
non-classical monocyte | 9.46e-11 | 3 |
CD14-low, CD16-positive monocyte | 9.46e-11 | 3 |
single nucleate cell | 6.10e-10 | 3 |
mononuclear cell | 6.10e-10 | 3 |
mesenchymal cell | 7.42e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.14e-80 | 98 |
blood island | 1.14e-80 | 98 |
hemolymphoid system | 4.17e-72 | 108 |
bone marrow | 8.71e-55 | 76 |
bone element | 4.56e-50 | 82 |
immune system | 3.35e-48 | 93 |
skeletal element | 9.56e-45 | 90 |
skeletal system | 2.78e-39 | 100 |
lateral plate mesoderm | 1.25e-37 | 203 |
blood | 4.83e-28 | 15 |
haemolymphatic fluid | 4.83e-28 | 15 |
organism substance | 4.83e-28 | 15 |
mesoderm | 6.57e-23 | 315 |
mesoderm-derived structure | 6.57e-23 | 315 |
presumptive mesoderm | 6.57e-23 | 315 |
musculoskeletal system | 1.57e-19 | 167 |
male genital duct | 7.07e-11 | 3 |
internal male genitalia | 7.07e-11 | 3 |
germ layer | 4.28e-10 | 560 |
germ layer / neural crest | 4.28e-10 | 560 |
embryonic tissue | 4.28e-10 | 560 |
presumptive structure | 4.28e-10 | 560 |
germ layer / neural crest derived structure | 4.28e-10 | 560 |
epiblast (generic) | 4.28e-10 | 560 |
embryonic structure | 6.33e-10 | 564 |
developing anatomical structure | 3.15e-09 | 581 |
embryo | 8.51e-09 | 592 |
duct of male reproductive system | 3.04e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.