FFCP PHASE1:Mm9::chr6:90732031..90732060,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232227|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=-7bp_to_uc009cxs.1_5end|description=CAGE_peak_12_at_Iqsec1_5end|id=chr6:90732031..90732060,-|ontology_enrichment_celltype=CL:0000117!1.19e-16!23;CL:0000337!1.19e-16!23;CL:0000221!2.11e-11!44;CL:0000133!2.11e-11!44;CL:0002319!4.01e-11!43;CL:0000540!4.71e-10!33;CL:0000047!4.71e-10!33;CL:0000031!4.71e-10!33;CL:0000404!4.71e-10!33;CL:0000055!2.77e-08!50;CL:0000393!2.22e-07!39;CL:0000211!2.22e-07!39;CL:0002609!3.93e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-23,23;CL:0000337,2.36e-23,23;CL:0000540,1.72e-15,33;CL:0000047,1.72e-15,33;CL:0000031,1.72e-15,33;CL:0000404,1.72e-15,33;CL:0002609,2.18e-14,6;CL:0002319,3.46e-13,43;CL:0000221,8.00e-13,44;CL:0000133,8.00e-13,44;CL:0000393,1.04e-12,39;CL:0000211,1.04e-12,39;CL:0000120,1.14e-11,3;CL:0002608,1.70e-11,3;CL:0002613,1.84e-11,3;CL:0002321,5.03e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.44e-24!49;UBERON:0001049!3.68e-24!52;UBERON:0005068!3.68e-24!52;UBERON:0006241!3.68e-24!52;UBERON:0007135!3.68e-24!52;UBERON:0001017!7.54e-24!73;UBERON:0005743!7.54e-24!73;UBERON:0002346!2.72e-23!71;UBERON:0003075!2.72e-23!71;UBERON:0007284!2.72e-23!71;UBERON:0000033!4.85e-23!63;UBERON:0000073!1.03e-22!75;UBERON:0001016!1.03e-22!75;UBERON:0002020!4.52e-22!34;UBERON:0004121!1.36e-20!102;UBERON:0000924!1.36e-20!102;UBERON:0006601!1.36e-20!102;UBERON:0003080!5.83e-20!40;UBERON:0002616!1.04e-19!49;UBERON:0002780!3.00e-19!39;UBERON:0001890!3.00e-19!39;UBERON:0006240!3.00e-19!39;UBERON:0000955!4.89e-19!50;UBERON:0006238!4.89e-19!50;UBERON:0002791!3.62e-18!29;UBERON:0003528!3.62e-18!29;UBERON:0001893!3.62e-18!29;UBERON:0007811!1.16e-15!86;UBERON:0000153!3.96e-15!94;UBERON:0000956!7.20e-13!21;UBERON:0001869!7.20e-13!21;UBERON:0000203!7.20e-13!21;UBERON:0002619!6.55e-10!17|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.03e-18,49;UBERON:0000369,1.20e-17,5;UBERON:0002435,1.20e-17,5;UBERON:0000204,1.20e-17,5;UBERON:0010082,1.20e-17,5;UBERON:0003528,1.72e-17,29;UBERON:0002791,1.72e-17,29;UBERON:0001893,1.72e-17,29;UBERON:0002020,5.02e-17,34;UBERON:0002346,2.74e-15,64;UBERON:0003075,2.74e-15,64;UBERON:0007284,2.74e-15,64;UBERON:0002420,4.14e-15,8;UBERON:0007245,4.14e-15,8;UBERON:0010009,4.14e-15,8;UBERON:0010011,4.14e-15,8;UBERON:0000454,4.14e-15,8;UBERON:0004121,9.10e-15,95;UBERON:0000924,9.10e-15,95;UBERON:0006601,9.10e-15,95;UBERON:0010371,6.12e-13,73;UBERON:0002780,2.38e-12,39;UBERON:0001890,2.38e-12,39;UBERON:0006240,2.38e-12,39;UBERON:0003080,5.61e-12,40;UBERON:0001017,8.23e-12,73;UBERON:0001016,2.13e-11,75;UBERON:0001049,3.61e-10,52;UBERON:0005068,3.61e-10,52;UBERON:0006241,3.61e-10,52;UBERON:0007135,3.61e-10,52;UBERON:0002616,4.39e-10,46;UBERON:0000955,8.15e-10,47;UBERON:0006238,8.15e-10,47;UBERON:0000073,1.09e-09,54;UBERON:0010314,1.73e-09,92;UBERON:0000970,1.07e-08,9;UBERON:0000019,1.07e-08,9;UBERON:0000047,1.07e-08,9;UBERON:0010312,1.07e-08,9;UBERON:0004088,1.07e-08,9;UBERON:0002104,1.07e-08,9;UBERON:0001456,1.07e-08,9;UBERON:0003072,1.07e-08,9;UBERON:0004128,1.07e-08,9;UBERON:0003071,1.07e-08,9;UBERON:0000956,4.31e-07,21;UBERON:0001869,4.31e-07,21;UBERON:0000203,4.31e-07,21;UBERON:0001444,4.51e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.63011399117477,6.87688273053643,7.60597684207415,0,0,0,0,0,0.299600110518405,0.768436610643109,1.55534418462716,1.35005938331691,0.630974884054146,0.571301968807607,0.883474163806454,4.28717797252339,4.2172007248024,5.51531271966013,0,0.510749352340751,0.153606533256243,5.27545150920775,4.02545631850602,4.68822033501084,0.279182999001381,1.12552522006336,0,0.589257170947335,0.569486723196412,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,1.37250180845588,5.15182843662744,0.347648640384553,0,0.41557608911912,0.486723789203273,0.101839363850316,0,0,0,1.17108398666433,0.689706313300419,0.900310649026746,1.50704817835715,1.08858398642125,1.2811372028485,1.59292931751539,0,0,0,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646793418913773,0.214337035031592,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0,0,0.608175645870493,0,0.129920822977795,0,0,0,0,0,0.228620419965,0.302478555410522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,1.24544817101012,0.399024873401031,1.19513524027894,0,0,0,0.44449345560323,0.618105171716683,0,0.505394423527595,1.01391719956096,0.377252682772152,0.0936415074698824,0.256100609619477,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0,0.147198920134397,2.05721551431249,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.689531376628944,0.409231043169689,0,0.385813221962283,0.749431733813838,0.233931608445408,0,0,0,0|short_description=p12@Iqsec1}} | ||
|EntrezGene=232227 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_uc009cxs.1_5end | |||
|description=CAGE_peak_12_at_Iqsec1_5end | |||
|id=chr6:90732031..90732060,- | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-16!23;CL:0000337!1.19e-16!23;CL:0000221!2.11e-11!44;CL:0000133!2.11e-11!44;CL:0002319!4.01e-11!43;CL:0000540!4.71e-10!33;CL:0000047!4.71e-10!33;CL:0000031!4.71e-10!33;CL:0000404!4.71e-10!33;CL:0000055!2.77e-08!50;CL:0000393!2.22e-07!39;CL:0000211!2.22e-07!39;CL:0002609!3.93e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-23,23;CL:0000337,2.36e-23,23;CL:0000540,1.72e-15,33;CL:0000047,1.72e-15,33;CL:0000031,1.72e-15,33;CL:0000404,1.72e-15,33;CL:0002609,2.18e-14,6;CL:0002319,3.46e-13,43;CL:0000221,8.00e-13,44;CL:0000133,8.00e-13,44;CL:0000393,1.04e-12,39;CL:0000211,1.04e-12,39;CL:0000120,1.14e-11,3;CL:0002608,1.70e-11,3;CL:0002613,1.84e-11,3;CL:0002321,5.03e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.44e-24!49;UBERON:0001049!3.68e-24!52;UBERON:0005068!3.68e-24!52;UBERON:0006241!3.68e-24!52;UBERON:0007135!3.68e-24!52;UBERON:0001017!7.54e-24!73;UBERON:0005743!7.54e-24!73;UBERON:0002346!2.72e-23!71;UBERON:0003075!2.72e-23!71;UBERON:0007284!2.72e-23!71;UBERON:0000033!4.85e-23!63;UBERON:0000073!1.03e-22!75;UBERON:0001016!1.03e-22!75;UBERON:0002020!4.52e-22!34;UBERON:0004121!1.36e-20!102;UBERON:0000924!1.36e-20!102;UBERON:0006601!1.36e-20!102;UBERON:0003080!5.83e-20!40;UBERON:0002616!1.04e-19!49;UBERON:0002780!3.00e-19!39;UBERON:0001890!3.00e-19!39;UBERON:0006240!3.00e-19!39;UBERON:0000955!4.89e-19!50;UBERON:0006238!4.89e-19!50;UBERON:0002791!3.62e-18!29;UBERON:0003528!3.62e-18!29;UBERON:0001893!3.62e-18!29;UBERON:0007811!1.16e-15!86;UBERON:0000153!3.96e-15!94;UBERON:0000956!7.20e-13!21;UBERON:0001869!7.20e-13!21;UBERON:0000203!7.20e-13!21;UBERON:0002619!6.55e-10!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.03e-18,49;UBERON:0000369,1.20e-17,5;UBERON:0002435,1.20e-17,5;UBERON:0000204,1.20e-17,5;UBERON:0010082,1.20e-17,5;UBERON:0003528,1.72e-17,29;UBERON:0002791,1.72e-17,29;UBERON:0001893,1.72e-17,29;UBERON:0002020,5.02e-17,34;UBERON:0002346,2.74e-15,64;UBERON:0003075,2.74e-15,64;UBERON:0007284,2.74e-15,64;UBERON:0002420,4.14e-15,8;UBERON:0007245,4.14e-15,8;UBERON:0010009,4.14e-15,8;UBERON:0010011,4.14e-15,8;UBERON:0000454,4.14e-15,8;UBERON:0004121,9.10e-15,95;UBERON:0000924,9.10e-15,95;UBERON:0006601,9.10e-15,95;UBERON:0010371,6.12e-13,73;UBERON:0002780,2.38e-12,39;UBERON:0001890,2.38e-12,39;UBERON:0006240,2.38e-12,39;UBERON:0003080,5.61e-12,40;UBERON:0001017,8.23e-12,73;UBERON:0001016,2.13e-11,75;UBERON:0001049,3.61e-10,52;UBERON:0005068,3.61e-10,52;UBERON:0006241,3.61e-10,52;UBERON:0007135,3.61e-10,52;UBERON:0002616,4.39e-10,46;UBERON:0000955,8.15e-10,47;UBERON:0006238,8.15e-10,47;UBERON:0000073,1.09e-09,54;UBERON:0010314,1.73e-09,92;UBERON:0000970,1.07e-08,9;UBERON:0000019,1.07e-08,9;UBERON:0000047,1.07e-08,9;UBERON:0010312,1.07e-08,9;UBERON:0004088,1.07e-08,9;UBERON:0002104,1.07e-08,9;UBERON:0001456,1.07e-08,9;UBERON:0003072,1.07e-08,9;UBERON:0004128,1.07e-08,9;UBERON:0003071,1.07e-08,9;UBERON:0000956,4.31e-07,21;UBERON:0001869,4.31e-07,21;UBERON:0000203,4.31e-07,21;UBERON:0001444,4.51e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.63011399117477,6.87688273053643,7.60597684207415,0,0,0,0,0,0.299600110518405,0.768436610643109,1.55534418462716,1.35005938331691,0.630974884054146,0.571301968807607,0.883474163806454,4.28717797252339,4.2172007248024,5.51531271966013,0,0.510749352340751,0.153606533256243,5.27545150920775,4.02545631850602,4.68822033501084,0.279182999001381,1.12552522006336,0,0.589257170947335,0.569486723196412,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,1.37250180845588,5.15182843662744,0.347648640384553,0,0.41557608911912,0.486723789203273,0.101839363850316,0,0,0,1.17108398666433,0.689706313300419,0.900310649026746,1.50704817835715,1.08858398642125,1.2811372028485,1.59292931751539,0,0,0,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646793418913773,0.214337035031592,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0,0,0.608175645870493,0,0.129920822977795,0,0,0,0,0,0.228620419965,0.302478555410522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,1.24544817101012,0.399024873401031,1.19513524027894,0,0,0,0.44449345560323,0.618105171716683,0,0.505394423527595,1.01391719956096,0.377252682772152,0.0936415074698824,0.256100609619477,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0,0.147198920134397,2.05721551431249,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.689531376628944,0.409231043169689,0,0.385813221962283,0.749431733813838,0.233931608445408,0,0,0,0 | |||
|short_description=p12@Iqsec1 | |||
}} |
Revision as of 10:57, 14 September 2013
Short description: | p12@Iqsec1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Iqsec1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -7bp_to_uc009cxs.1_5end |
EntrezGene: | Iqsec1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.36e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-23 | 23 |
neuron | 1.72e-15 | 33 |
neuronal stem cell | 1.72e-15 | 33 |
neuroblast | 1.72e-15 | 33 |
electrically signaling cell | 1.72e-15 | 33 |
neuron of cerebral cortex | 2.18e-14 | 6 |
neural cell | 3.46e-13 | 43 |
ectodermal cell | 8.00e-13 | 44 |
neurectodermal cell | 8.00e-13 | 44 |
electrically responsive cell | 1.04e-12 | 39 |
electrically active cell | 1.04e-12 | 39 |
granule cell | 1.14e-11 | 3 |
hippocampal neuron | 1.70e-11 | 3 |
striatum neuron | 1.84e-11 | 3 |
embryonic cell | 5.03e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.