FFCP PHASE1:Mm9::chr7:148621226..148621274,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68267|HGNC=|UniProt=|association_with_transcript=-3bp_to_ENSMUST00000132635_5end|description=CAGE_peak_2_at_Slc25a22_5end|id=chr7:148621226..148621274,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.57e-14!52;UBERON:0005068!2.57e-14!52;UBERON:0006241!2.57e-14!52;UBERON:0007135!2.57e-14!52;UBERON:0000955!2.94e-14!50;UBERON:0006238!2.94e-14!50;UBERON:0002616!6.12e-14!49;UBERON:0001017!1.60e-13!73;UBERON:0005743!1.60e-13!73;UBERON:0000073!7.54e-13!75;UBERON:0001016!7.54e-13!75;UBERON:0000033!2.20e-12!63;UBERON:0002020!7.74e-12!34;UBERON:0002346!1.66e-11!71;UBERON:0003075!1.66e-11!71;UBERON:0007284!1.66e-11!71;UBERON:0003080!7.21e-11!40;UBERON:0002791!7.90e-11!29;UBERON:0003528!7.90e-11!29;UBERON:0001893!7.90e-11!29;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0003056!4.44e-10!49;UBERON:0004121!5.71e-10!102;UBERON:0000924!5.71e-10!102;UBERON:0006601!5.71e-10!102;UBERON:0000025!1.03e-09!114;UBERON:0004111!1.03e-08!122;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002619!1.11e-07!17;UBERON:0007811!5.34e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.07e-15,54;UBERON:0001049,2.52e-14,52;UBERON:0005068,2.52e-14,52;UBERON:0006241,2.52e-14,52;UBERON:0007135,2.52e-14,52;UBERON:0001017,1.57e-13,73;UBERON:0000955,3.84e-13,47;UBERON:0006238,3.84e-13,47;UBERON:0001016,7.42e-13,75;UBERON:0002346,7.79e-13,64;UBERON:0003075,7.79e-13,64;UBERON:0007284,7.79e-13,64;UBERON:0002616,7.88e-13,46;UBERON:0002020,7.63e-12,34;UBERON:0003080,7.12e-11,40;UBERON:0003528,7.80e-11,29;UBERON:0002791,7.80e-11,29;UBERON:0001893,7.80e-11,29;UBERON:0004121,9.36e-11,95;UBERON:0000924,9.36e-11,95;UBERON:0006601,9.36e-11,95;UBERON:0002780,1.45e-10,39;UBERON:0001890,1.45e-10,39;UBERON:0006240,1.45e-10,39;UBERON:0010371,1.60e-10,73;UBERON:0003056,4.39e-10,49;UBERON:0000025,1.16e-09,114;UBERON:0000956,1.04e-08,21;UBERON:0001869,1.04e-08,21;UBERON:0000203,1.04e-08,21;UBERON:0004111,1.14e-08,122;UBERON:0010314,2.17e-08,92;UBERON:0002619,1.10e-07,17;UBERON:0011216,1.32e-07,194|phase1_expression=1.92178616525753,40.8301226938052,42.3149292632269,24.1971369045464,29.0519523368881,4.36486106970913,6.07392865548367,1.80772652818207,2.81577444303333,7.2560003159818,2.91070545983358,2.95156988282745,0.856003649656029,1.83582845079895,1.99865857089398,1.82227740650843,0.699561878128147,2.05050407482854,1.91960207048034,0.84877930359606,6.12311689087702,1.09220046320974,0.783599367416806,17.2791816616879,22.2527002635155,33.3054539186712,23.6919097887491,24.5637205261914,23.7529274320467,17.8941392129551,24.6120866827388,1.90509202037889,1.84519436275371,31.6963362030877,0.577703239502549,0.997407872150954,0,1.67412652294763,0,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,2.89562681343828,2.43304634926835,2.20256102594018,7.04152209913235,6.32272953503295,5.05278220289285,6.41618666945135,5.5994568650145,8.62515386189829,2.18117387875057,4.35217285206807,1.34437519656986,3.60163210450326,2.86533439938757,2.06268836910977,6.47412674750713,7.93486468908049,5.07065122804943,6.43804610931351,8.89294796111139,3.5995988691256,8.89979726310277,2.8419204597844,7.19040265244171,8.4528027170742,9.43575472007147,9.58542162155004,9.04397333810943,10.2834354385369,10.6016899656774,7.10446635446733,8.72193786265951,9.19218786610021,11.0115880999389,18.1316020080967,15.6678663921368,8.04506355154182,7.95942499340964,10.4182674111352,15.0758819460746,10.1297269805702,16.8078072554491,10.0173719061047,10.1083893367363,4.65998614563251,2.42323818666189,2.11600368298999,1.73918693221007,18.0689014166091,21.759082678648,92.8289489617046,68.8763002494529,90.9494580807591,28.9315505471409,0.681721290312231,1.03914401841148,0.70667914902068,1.54927761754349,0,2.54805239706646,0,0,0.253359865475099,0,99.5683431150203,4.14300613835475,14.6957717674177,1.56136794089522,1.82679286987285,1.61430848079241,1.80867168663147,5.64425794251383,14.5773245942424,1.48316980640624,57.1167459833651,1.76922110389975,3.23533699894818,5.52103796150984,1.45462575940567,1.86391761218122,32.7914492652933,36.6531736923546,37.0412730052457,0.958520996047362,0,0.762421362438388,12.4326230706003,18.3000241127451,9.42407640846483,22.7709859451882,23.0143911597297,17.0386196538839,17.3598151482501,2.24046600470696,5.22509276562391,13.3943061969848,7.57590681191306,1.82168620147785,2.06911893990126,4.50155324513373,2.86339153887859,3.60593445502038,4.61209393025459,5.80950692270319,12.9351685369508,2.37124792226126,2.08016688184601,1.93546236580344,1.53437012699302,1.66828349535359,3.48252166522167,1.23469281844766,2.18937693500343,0,0.257347907114715,1.13665399758237,1.65700618028402,0.703578179943289,1.2604344302271,1.65721314909647,1.57411385397923,1.69693824176116,1.86027155800326,1.87791380979733,2.80236821681207,4.11399624783701,16.2525789438304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| ||
|EntrezGene=68267 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENSMUST00000132635_5end | |||
|description=CAGE_peak_2_at_Slc25a22_5end | |||
|id=chr7:148621226..148621274,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.57e-14!52;UBERON:0005068!2.57e-14!52;UBERON:0006241!2.57e-14!52;UBERON:0007135!2.57e-14!52;UBERON:0000955!2.94e-14!50;UBERON:0006238!2.94e-14!50;UBERON:0002616!6.12e-14!49;UBERON:0001017!1.60e-13!73;UBERON:0005743!1.60e-13!73;UBERON:0000073!7.54e-13!75;UBERON:0001016!7.54e-13!75;UBERON:0000033!2.20e-12!63;UBERON:0002020!7.74e-12!34;UBERON:0002346!1.66e-11!71;UBERON:0003075!1.66e-11!71;UBERON:0007284!1.66e-11!71;UBERON:0003080!7.21e-11!40;UBERON:0002791!7.90e-11!29;UBERON:0003528!7.90e-11!29;UBERON:0001893!7.90e-11!29;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0003056!4.44e-10!49;UBERON:0004121!5.71e-10!102;UBERON:0000924!5.71e-10!102;UBERON:0006601!5.71e-10!102;UBERON:0000025!1.03e-09!114;UBERON:0004111!1.03e-08!122;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002619!1.11e-07!17;UBERON:0007811!5.34e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.07e-15,54;UBERON:0001049,2.52e-14,52;UBERON:0005068,2.52e-14,52;UBERON:0006241,2.52e-14,52;UBERON:0007135,2.52e-14,52;UBERON:0001017,1.57e-13,73;UBERON:0000955,3.84e-13,47;UBERON:0006238,3.84e-13,47;UBERON:0001016,7.42e-13,75;UBERON:0002346,7.79e-13,64;UBERON:0003075,7.79e-13,64;UBERON:0007284,7.79e-13,64;UBERON:0002616,7.88e-13,46;UBERON:0002020,7.63e-12,34;UBERON:0003080,7.12e-11,40;UBERON:0003528,7.80e-11,29;UBERON:0002791,7.80e-11,29;UBERON:0001893,7.80e-11,29;UBERON:0004121,9.36e-11,95;UBERON:0000924,9.36e-11,95;UBERON:0006601,9.36e-11,95;UBERON:0002780,1.45e-10,39;UBERON:0001890,1.45e-10,39;UBERON:0006240,1.45e-10,39;UBERON:0010371,1.60e-10,73;UBERON:0003056,4.39e-10,49;UBERON:0000025,1.16e-09,114;UBERON:0000956,1.04e-08,21;UBERON:0001869,1.04e-08,21;UBERON:0000203,1.04e-08,21;UBERON:0004111,1.14e-08,122;UBERON:0010314,2.17e-08,92;UBERON:0002619,1.10e-07,17;UBERON:0011216,1.32e-07,194 | |||
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| |||
|short_description=p2@Slc25a22 | |||
}} |
Revision as of 12:19, 14 September 2013
Short description: | p2@Slc25a22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc25a22_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENSMUST00000132635_5end |
EntrezGene: | Slc25a22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.07e-15 | 54 |
neural tube | 2.52e-14 | 52 |
neural rod | 2.52e-14 | 52 |
future spinal cord | 2.52e-14 | 52 |
neural keel | 2.52e-14 | 52 |
central nervous system | 1.57e-13 | 73 |
brain | 3.84e-13 | 47 |
future brain | 3.84e-13 | 47 |
nervous system | 7.42e-13 | 75 |
neurectoderm | 7.79e-13 | 64 |
neural plate | 7.79e-13 | 64 |
presumptive neural plate | 7.79e-13 | 64 |
regional part of brain | 7.88e-13 | 46 |
gray matter | 7.63e-12 | 34 |
anterior neural tube | 7.12e-11 | 40 |
brain grey matter | 7.80e-11 | 29 |
regional part of telencephalon | 7.80e-11 | 29 |
telencephalon | 7.80e-11 | 29 |
ectoderm-derived structure | 9.36e-11 | 95 |
ectoderm | 9.36e-11 | 95 |
presumptive ectoderm | 9.36e-11 | 95 |
regional part of forebrain | 1.45e-10 | 39 |
forebrain | 1.45e-10 | 39 |
future forebrain | 1.45e-10 | 39 |
ecto-epithelium | 1.60e-10 | 73 |
pre-chordal neural plate | 4.39e-10 | 49 |
tube | 1.16e-09 | 114 |
cerebral cortex | 1.04e-08 | 21 |
cerebral hemisphere | 1.04e-08 | 21 |
pallium | 1.04e-08 | 21 |
anatomical conduit | 1.14e-08 | 122 |
structure with developmental contribution from neural crest | 2.17e-08 | 92 |
regional part of cerebral cortex | 1.10e-07 | 17 |
organ system subdivision | 1.32e-07 | 194 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.