FFCP PHASE1:Mm9::chr8:114457661..114457716,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234740|HGNC=|MCL_coexpression_id=60|UniProt=Q3U284|association_with_transcript=0bp_to_ENSMUST00000034429,NM_001033321,uc009nna.1,uc012gky.1_5end|description=CAGE_peak_1_at_Tmem231_5end|id=chr8:114457661..114457716,-|ontology_enrichment_celltype=CL:0000055!1.98e-10!50;CL:0000221!2.67e-10!44;CL:0000133!2.67e-10!44;CL:0002319!5.30e-10!43;CL:0000393!1.29e-07!39;CL:0000211!1.29e-07!39;CL:0000117!1.40e-07!23;CL:0000337!1.40e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,2.63e-10,44;CL:0000133,2.63e-10,44;CL:0002319,5.21e-10,43;CL:0000393,1.27e-07,39;CL:0000211,1.27e-07,39;CL:0000117,1.38e-07,23;CL:0000337,1.38e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.32e-21!73;UBERON:0005743!1.32e-21!73;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0004121!2.48e-20!102;UBERON:0000924!2.48e-20!102;UBERON:0006601!2.48e-20!102;UBERON:0000033!1.54e-19!63;UBERON:0002346!8.87e-19!71;UBERON:0003075!8.87e-19!71;UBERON:0007284!8.87e-19!71;UBERON:0001049!3.59e-17!52;UBERON:0005068!3.59e-17!52;UBERON:0006241!3.59e-17!52;UBERON:0007135!3.59e-17!52;UBERON:0000955!2.03e-16!50;UBERON:0006238!2.03e-16!50;UBERON:0003056!3.08e-16!49;UBERON:0002616!6.69e-16!49;UBERON:0003080!4.21e-13!40;UBERON:0002780!1.29e-12!39;UBERON:0001890!1.29e-12!39;UBERON:0006240!1.29e-12!39;UBERON:0000153!2.19e-09!94;UBERON:0002020!3.37e-09!34;UBERON:0007811!1.09e-07!86;UBERON:0002791!1.40e-07!29;UBERON:0003528!1.40e-07!29;UBERON:0001893!1.40e-07!29;UBERON:0000475!3.73e-07!200;UBERON:0000489!7.17e-07!21;UBERON:0001894!9.81e-07!10;UBERON:0006222!9.81e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-21,73;UBERON:0004121,2.78e-21,95;UBERON:0000924,2.78e-21,95;UBERON:0006601,2.78e-21,95;UBERON:0001016,9.86e-21,75;UBERON:0002346,2.71e-20,64;UBERON:0003075,2.71e-20,64;UBERON:0007284,2.71e-20,64;UBERON:0010371,6.86e-19,73;UBERON:0000073,9.03e-18,54;UBERON:0001049,3.48e-17,52;UBERON:0005068,3.48e-17,52;UBERON:0006241,3.48e-17,52;UBERON:0007135,3.48e-17,52;UBERON:0003056,3.00e-16,49;UBERON:0000955,1.50e-15,47;UBERON:0006238,1.50e-15,47;UBERON:0002616,4.88e-15,46;UBERON:0003080,4.12e-13,40;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0010314,3.57e-12,92;UBERON:0002020,3.33e-09,34;UBERON:0003528,1.39e-07,29;UBERON:0002791,1.39e-07,29;UBERON:0001893,1.39e-07,29;UBERON:0000489,7.10e-07,21;UBERON:0001894,9.71e-07,10;UBERON:0006222,9.71e-07,10|phase1_expression=30.5884297970156,0.697950815278722,0.909998478779072,0,0,0.671517087647559,1.63528848416868,1.16210991097419,0,0,0.171217968225505,0.319088635981346,0.171200729931206,0.262261207256992,4.99664642723494,8.30148596298286,9.09430441566591,3.15462165358238,3.97631857456642,3.39511721438424,24.4924675635081,0,0,2.71987118748791,1.83527424853736,0,0.430761996159075,0,0,0.252030129759931,0.886922042621219,13.3356441426523,15.9916844771988,31.6963362030877,2.02196133825892,1.82858109894342,1.83752420636132,0,0,0,0,0,0,27.8231967726026,26.0538713234152,18.1711284640065,47.7258720052304,32.4857483006865,31.4151241310295,34.0252323379996,27.7173114818218,35.9381410912429,1.34226084846189,0,1.00828139742739,12.3484529297255,16.6189395164479,13.4074743992135,24.4802917640113,30.1524858185059,29.1562445612842,15.5868484751801,31.1253178638899,7.64914759689189,9.88866362566974,8.5257613793532,28.7616106097669,46.1061966385865,12.2353742524004,15.255671031481,14.302097371894,21.4238238302853,25.3998822094356,19.3535462759627,15.814502718009,26.6573448116906,27.5289702498472,18.6423513604374,17.8183578577242,27.8280067110709,27.9037312987349,27.6084086395083,18.4260779340911,20.2594539611405,20.933359945423,27.6950870345248,22.2099822046601,18.4535451367048,4.01348824665875,11.9403064968721,11.3047150593654,3.44169550792555,0,1.07940638327563,0,0,6.46044332606059,23.3489541931939,11.950156211732,14.1335829804136,21.6898866456088,14.115912515575,2.54805239706646,21.3320010945999,6.92771331235885,8.61423542615335,7.07734223020697,5.709193985953,6.21450920753212,19.8912466346865,11.450031566565,8.8294988710521,11.5307748628029,10.0984169170257,8.46638691377075,14.0746582289237,8.40462890296871,11.1341504828332,7.96149496754887,8.41187619726528,5.30019644304944,5.33362778448744,9.31958806090611,25.1791485429931,16.9651832518899,4.34276993854605,1.43778149407104,0.599902730993408,1.14363204365758,27.5614776504874,42.5475560621323,22.4921290282027,23.8139318663419,19.6900902144355,28.4669621046597,21.5780879880118,16.1924588522003,11.4454412961286,34.8757406638471,12.2056276414155,29.1469792236456,28.0480567408837,28.4498165092452,23.811361218043,22.1118622241816,21.7793324484245,20.5206776785806,24.3181168494675,23.9280472155455,25.7184269028234,27.448375369576,26.303487891309,25.3022996795294,15.6713474934975,18.314610140307,20.1024609486678,0,0.51469581422943,0.284163499395593,7.24940203874257,8.20841209933837,5.40186184383045,8.52281048106757,4.72234156193769,5.39934895105824,5.115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| ||
|EntrezGene=234740 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q3U284 | |||
|association_with_transcript=0bp_to_ENSMUST00000034429,NM_001033321,uc009nna.1,uc012gky.1_5end | |||
|description=CAGE_peak_1_at_Tmem231_5end | |||
|id=chr8:114457661..114457716,- | |||
|ontology_enrichment_celltype=CL:0000055!1.98e-10!50;CL:0000221!2.67e-10!44;CL:0000133!2.67e-10!44;CL:0002319!5.30e-10!43;CL:0000393!1.29e-07!39;CL:0000211!1.29e-07!39;CL:0000117!1.40e-07!23;CL:0000337!1.40e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.63e-10,44;CL:0000133,2.63e-10,44;CL:0002319,5.21e-10,43;CL:0000393,1.27e-07,39;CL:0000211,1.27e-07,39;CL:0000117,1.38e-07,23;CL:0000337,1.38e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.32e-21!73;UBERON:0005743!1.32e-21!73;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0004121!2.48e-20!102;UBERON:0000924!2.48e-20!102;UBERON:0006601!2.48e-20!102;UBERON:0000033!1.54e-19!63;UBERON:0002346!8.87e-19!71;UBERON:0003075!8.87e-19!71;UBERON:0007284!8.87e-19!71;UBERON:0001049!3.59e-17!52;UBERON:0005068!3.59e-17!52;UBERON:0006241!3.59e-17!52;UBERON:0007135!3.59e-17!52;UBERON:0000955!2.03e-16!50;UBERON:0006238!2.03e-16!50;UBERON:0003056!3.08e-16!49;UBERON:0002616!6.69e-16!49;UBERON:0003080!4.21e-13!40;UBERON:0002780!1.29e-12!39;UBERON:0001890!1.29e-12!39;UBERON:0006240!1.29e-12!39;UBERON:0000153!2.19e-09!94;UBERON:0002020!3.37e-09!34;UBERON:0007811!1.09e-07!86;UBERON:0002791!1.40e-07!29;UBERON:0003528!1.40e-07!29;UBERON:0001893!1.40e-07!29;UBERON:0000475!3.73e-07!200;UBERON:0000489!7.17e-07!21;UBERON:0001894!9.81e-07!10;UBERON:0006222!9.81e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-21,73;UBERON:0004121,2.78e-21,95;UBERON:0000924,2.78e-21,95;UBERON:0006601,2.78e-21,95;UBERON:0001016,9.86e-21,75;UBERON:0002346,2.71e-20,64;UBERON:0003075,2.71e-20,64;UBERON:0007284,2.71e-20,64;UBERON:0010371,6.86e-19,73;UBERON:0000073,9.03e-18,54;UBERON:0001049,3.48e-17,52;UBERON:0005068,3.48e-17,52;UBERON:0006241,3.48e-17,52;UBERON:0007135,3.48e-17,52;UBERON:0003056,3.00e-16,49;UBERON:0000955,1.50e-15,47;UBERON:0006238,1.50e-15,47;UBERON:0002616,4.88e-15,46;UBERON:0003080,4.12e-13,40;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0010314,3.57e-12,92;UBERON:0002020,3.33e-09,34;UBERON:0003528,1.39e-07,29;UBERON:0002791,1.39e-07,29;UBERON:0001893,1.39e-07,29;UBERON:0000489,7.10e-07,21;UBERON:0001894,9.71e-07,10;UBERON:0006222,9.71e-07,10 | |||
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| |||
|short_description=p1@Tmem231 | |||
}} |
Revision as of 14:48, 14 September 2013
Short description: | p1@Tmem231 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem231_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000034429, NM_001033321, uc009nna.1, uc012gky.1_5end |
EntrezGene: | Tmem231 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.63e-10 | 44 |
neurectodermal cell | 2.63e-10 | 44 |
neural cell | 5.21e-10 | 43 |
electrically responsive cell | 1.27e-07 | 39 |
electrically active cell | 1.27e-07 | 39 |
CNS neuron (sensu Vertebrata) | 1.38e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.27e-21 | 73 |
ectoderm-derived structure | 2.78e-21 | 95 |
ectoderm | 2.78e-21 | 95 |
presumptive ectoderm | 2.78e-21 | 95 |
nervous system | 9.86e-21 | 75 |
neurectoderm | 2.71e-20 | 64 |
neural plate | 2.71e-20 | 64 |
presumptive neural plate | 2.71e-20 | 64 |
ecto-epithelium | 6.86e-19 | 73 |
regional part of nervous system | 9.03e-18 | 54 |
neural tube | 3.48e-17 | 52 |
neural rod | 3.48e-17 | 52 |
future spinal cord | 3.48e-17 | 52 |
neural keel | 3.48e-17 | 52 |
pre-chordal neural plate | 3.00e-16 | 49 |
brain | 1.50e-15 | 47 |
future brain | 1.50e-15 | 47 |
regional part of brain | 4.88e-15 | 46 |
anterior neural tube | 4.12e-13 | 40 |
regional part of forebrain | 1.26e-12 | 39 |
forebrain | 1.26e-12 | 39 |
future forebrain | 1.26e-12 | 39 |
structure with developmental contribution from neural crest | 3.57e-12 | 92 |
gray matter | 3.33e-09 | 34 |
brain grey matter | 1.39e-07 | 29 |
regional part of telencephalon | 1.39e-07 | 29 |
telencephalon | 1.39e-07 | 29 |
cavitated compound organ | 7.10e-07 | 21 |
diencephalon | 9.71e-07 | 10 |
future diencephalon | 9.71e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.