FFCP PHASE1:Mm9::chrX:130223546..130223555,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=279653|HGNC=|UniProt=E9Q5E1,Q80TF3,Q147Z9|association_with_transcript=-14bp_to_ENSMUST00000167944,NM_001105245,NM_001105246,uc009uew.2,uc009uex.2_5end|description=CAGE_peak_2_at_Pcdh19_5end|id=chrX:130223546..130223555,-|ontology_enrichment_celltype=CL:0000117!9.24e-12!23;CL:0000337!9.24e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-19,23;CL:0000337,7.31e-19,23;CL:0000540,2.66e-11,33;CL:0000047,2.66e-11,33;CL:0000031,2.66e-11,33;CL:0000404,2.66e-11,33;CL:0000393,1.41e-09,39;CL:0000211,1.41e-09,39;CL:0002319,2.24e-07,43;CL:0000221,4.34e-07,44;CL:0000133,4.34e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.02e-18!52;UBERON:0005068!9.02e-18!52;UBERON:0006241!9.02e-18!52;UBERON:0007135!9.02e-18!52;UBERON:0002346!2.43e-17!71;UBERON:0003075!2.43e-17!71;UBERON:0007284!2.43e-17!71;UBERON:0002020!7.84e-17!34;UBERON:0003056!1.63e-16!49;UBERON:0000033!6.26e-16!63;UBERON:0000955!2.23e-15!50;UBERON:0006238!2.23e-15!50;UBERON:0004121!3.32e-15!102;UBERON:0000924!3.32e-15!102;UBERON:0006601!3.32e-15!102;UBERON:0003080!7.23e-15!40;UBERON:0002616!9.69e-15!49;UBERON:0002780!2.35e-14!39;UBERON:0001890!2.35e-14!39;UBERON:0006240!2.35e-14!39;UBERON:0001017!9.02e-14!73;UBERON:0005743!9.02e-14!73;UBERON:0002791!1.10e-13!29;UBERON:0003528!1.10e-13!29;UBERON:0001893!1.10e-13!29;UBERON:0000073!3.29e-13!75;UBERON:0001016!3.29e-13!75;UBERON:0000956!1.54e-09!21;UBERON:0001869!1.54e-09!21;UBERON:0000203!1.54e-09!21;UBERON:0000153!9.53e-09!94;UBERON:0007811!4.43e-08!86;UBERON:0002619!7.84e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.83e-22,34;UBERON:0000073,2.93e-21,54;UBERON:0001049,2.94e-19,52;UBERON:0005068,2.94e-19,52;UBERON:0006241,2.94e-19,52;UBERON:0007135,2.94e-19,52;UBERON:0002346,2.43e-18,64;UBERON:0003075,2.43e-18,64;UBERON:0007284,2.43e-18,64;UBERON:0001017,5.11e-18,73;UBERON:0001016,3.17e-17,75;UBERON:0003528,8.65e-17,29;UBERON:0002791,8.65e-17,29;UBERON:0001893,8.65e-17,29;UBERON:0003056,5.10e-16,49;UBERON:0000955,7.34e-16,47;UBERON:0006238,7.34e-16,47;UBERON:0010371,1.01e-15,73;UBERON:0003080,1.17e-15,40;UBERON:0004121,1.36e-15,95;UBERON:0000924,1.36e-15,95;UBERON:0006601,1.36e-15,95;UBERON:0002616,7.65e-15,46;UBERON:0002780,8.37e-15,39;UBERON:0001890,8.37e-15,39;UBERON:0006240,8.37e-15,39;UBERON:0010314,3.23e-10,92;UBERON:0000956,9.08e-10,21;UBERON:0001869,9.08e-10,21;UBERON:0000203,9.08e-10,21;UBERON:0002420,7.08e-09,8;UBERON:0007245,7.08e-09,8;UBERON:0010009,7.08e-09,8;UBERON:0010011,7.08e-09,8;UBERON:0000454,7.08e-09,8;UBERON:0000369,4.94e-08,5;UBERON:0002435,4.94e-08,5;UBERON:0000204,4.94e-08,5;UBERON:0010082,4.94e-08,5;UBERON:0002619,6.53e-08,17;UBERON:0001948,2.15e-07,5;UBERON:0002315,2.15e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.972149495371417,0.699932108126813,0,0,0,0,1.02903774414379,0.286533439938757,0,2.63011399117477,5.81890077199236,1.90149421051854,2.71075625655306,1.77858959222228,0.449949858640699,0,0.7104801149461,0.299600110518405,0,1.65903379693564,0.945041568321835,2.3135745748652,1.42825492201902,2.87129103237098,1.71487118900936,3.45043695665651,0.919218786610021,0,1.91531007127782,2.30409799884365,4.08847491963601,3.7509933876988,3.12548022334056,0.279182999001381,2.8138130501584,2.29197371665215,5.00868595305235,3.55929201997757,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.35333957451034,0.14084341977668,0,5.09610479413291,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0,0.470354828542819,0.125666591329675,0,1.44599356919912,0,0.808834249737046,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,1.64769703345305,2.28750301409313,5.02617408451458,1.21677024134594,1.79000820131231,1.66230435647648,2.59586020908412,0.712875546952214,0.373220911830279,0,0,1.56144531555244,0.689706313300419,1.26043490863744,1.05493372485001,0.816437989815934,0.768682321709099,0.655912071918102,1.81092359517311,0.215567992932842,0.567318240503458,1.58356011747554,0.43839146485515,0.278047249225598,1.39300866608867,0.411564272815887,0.59710280045548,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0.233530684734339,0.658239399653922,0.492502392237286,0.648550476366846,0.292399974850665,0.878200461164203,0.536825675041487,2.73376933133365,4.83651678182637,0,0.793351699990633,0.213288250535234,0,0.77320476793256,0,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0,0.210407459670956,0,0,0.31399745568275,0,0,0.16684510571609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| ||
|EntrezGene=279653 | |||
|HGNC= | |||
|UniProt=E9Q5E1,Q80TF3,Q147Z9 | |||
|association_with_transcript=-14bp_to_ENSMUST00000167944,NM_001105245,NM_001105246,uc009uew.2,uc009uex.2_5end | |||
|description=CAGE_peak_2_at_Pcdh19_5end | |||
|id=chrX:130223546..130223555,- | |||
|ontology_enrichment_celltype=CL:0000117!9.24e-12!23;CL:0000337!9.24e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-19,23;CL:0000337,7.31e-19,23;CL:0000540,2.66e-11,33;CL:0000047,2.66e-11,33;CL:0000031,2.66e-11,33;CL:0000404,2.66e-11,33;CL:0000393,1.41e-09,39;CL:0000211,1.41e-09,39;CL:0002319,2.24e-07,43;CL:0000221,4.34e-07,44;CL:0000133,4.34e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.02e-18!52;UBERON:0005068!9.02e-18!52;UBERON:0006241!9.02e-18!52;UBERON:0007135!9.02e-18!52;UBERON:0002346!2.43e-17!71;UBERON:0003075!2.43e-17!71;UBERON:0007284!2.43e-17!71;UBERON:0002020!7.84e-17!34;UBERON:0003056!1.63e-16!49;UBERON:0000033!6.26e-16!63;UBERON:0000955!2.23e-15!50;UBERON:0006238!2.23e-15!50;UBERON:0004121!3.32e-15!102;UBERON:0000924!3.32e-15!102;UBERON:0006601!3.32e-15!102;UBERON:0003080!7.23e-15!40;UBERON:0002616!9.69e-15!49;UBERON:0002780!2.35e-14!39;UBERON:0001890!2.35e-14!39;UBERON:0006240!2.35e-14!39;UBERON:0001017!9.02e-14!73;UBERON:0005743!9.02e-14!73;UBERON:0002791!1.10e-13!29;UBERON:0003528!1.10e-13!29;UBERON:0001893!1.10e-13!29;UBERON:0000073!3.29e-13!75;UBERON:0001016!3.29e-13!75;UBERON:0000956!1.54e-09!21;UBERON:0001869!1.54e-09!21;UBERON:0000203!1.54e-09!21;UBERON:0000153!9.53e-09!94;UBERON:0007811!4.43e-08!86;UBERON:0002619!7.84e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.83e-22,34;UBERON:0000073,2.93e-21,54;UBERON:0001049,2.94e-19,52;UBERON:0005068,2.94e-19,52;UBERON:0006241,2.94e-19,52;UBERON:0007135,2.94e-19,52;UBERON:0002346,2.43e-18,64;UBERON:0003075,2.43e-18,64;UBERON:0007284,2.43e-18,64;UBERON:0001017,5.11e-18,73;UBERON:0001016,3.17e-17,75;UBERON:0003528,8.65e-17,29;UBERON:0002791,8.65e-17,29;UBERON:0001893,8.65e-17,29;UBERON:0003056,5.10e-16,49;UBERON:0000955,7.34e-16,47;UBERON:0006238,7.34e-16,47;UBERON:0010371,1.01e-15,73;UBERON:0003080,1.17e-15,40;UBERON:0004121,1.36e-15,95;UBERON:0000924,1.36e-15,95;UBERON:0006601,1.36e-15,95;UBERON:0002616,7.65e-15,46;UBERON:0002780,8.37e-15,39;UBERON:0001890,8.37e-15,39;UBERON:0006240,8.37e-15,39;UBERON:0010314,3.23e-10,92;UBERON:0000956,9.08e-10,21;UBERON:0001869,9.08e-10,21;UBERON:0000203,9.08e-10,21;UBERON:0002420,7.08e-09,8;UBERON:0007245,7.08e-09,8;UBERON:0010009,7.08e-09,8;UBERON:0010011,7.08e-09,8;UBERON:0000454,7.08e-09,8;UBERON:0000369,4.94e-08,5;UBERON:0002435,4.94e-08,5;UBERON:0000204,4.94e-08,5;UBERON:0010082,4.94e-08,5;UBERON:0002619,6.53e-08,17;UBERON:0001948,2.15e-07,5;UBERON:0002315,2.15e-07,5 | |||
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|short_description=p2@Pcdh19 | |||
}} |
Revision as of 19:17, 14 September 2013
Short description: | p2@Pcdh19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcdh19_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENSMUST00000167944, NM_001105245, NM_001105246, uc009uew.2, uc009uex.2_5end |
EntrezGene: | Pcdh19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.31e-19 | 23 |
neuroblast (sensu Vertebrata) | 7.31e-19 | 23 |
neuron | 2.66e-11 | 33 |
neuronal stem cell | 2.66e-11 | 33 |
neuroblast | 2.66e-11 | 33 |
electrically signaling cell | 2.66e-11 | 33 |
electrically responsive cell | 1.41e-09 | 39 |
electrically active cell | 1.41e-09 | 39 |
neural cell | 2.24e-07 | 43 |
ectodermal cell | 4.34e-07 | 44 |
neurectodermal cell | 4.34e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.