FFCP PHASE1:Hg19::chr1:57110857..57110886,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5563 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9377 | |||
|TSSclassifier=strong | |||
|UniProt=P54646 | |||
|association_with_transcript=-103bp_to_NM_006252,uc001cyk.3_5end | |||
|description=CAGE_peak_2_at_PRKAA2_5end | |||
|id=chr1:57110857..57110886,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.43e-09;29!UBERON:0003104;9.33e-07;31!UBERON:0006595;9.80e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.18e-12!106;DOID:0050687!5.46e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.27e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-25!115;UBERON:0000481!9.70e-23!347;UBERON:0000477!1.10e-17!286;UBERON:0000475!9.38e-17!365;UBERON:0000062!2.19e-16!511;UBERON:0000064!2.71e-15!219;UBERON:0000468!7.56e-15!659;UBERON:0000119!1.13e-14!312;UBERON:0000483!1.13e-14!309;UBERON:0000467!2.91e-14!625;UBERON:0000480!4.53e-14!626;UBERON:0000922!8.37e-14!612;UBERON:0003075!9.05e-14!86;UBERON:0007284!9.05e-14!86;UBERON:0002050!8.87e-13!605;UBERON:0005423!8.87e-13!605;UBERON:0002346!1.16e-12!90;UBERON:0005743!1.33e-12!86;UBERON:0000923!1.81e-12!604;UBERON:0005291!1.81e-12!604;UBERON:0006598!1.81e-12!604;UBERON:0002532!1.81e-12!604;UBERON:0004111!2.59e-12!241;UBERON:0001049!5.63e-12!57;UBERON:0005068!5.63e-12!57;UBERON:0006241!5.63e-12!57;UBERON:0007135!5.63e-12!57;UBERON:0000153!1.03e-11!129;UBERON:0007811!1.03e-11!129;UBERON:0000033!1.09e-11!123;UBERON:0001017!1.37e-11!82;UBERON:0004119!1.83e-11!169;UBERON:0000925!1.83e-11!169;UBERON:0006595!1.83e-11!169;UBERON:0000025!3.66e-11!194;UBERON:0000955!3.87e-11!69;UBERON:0006238!3.87e-11!69;UBERON:0002616!5.41e-11!59;UBERON:0001007!5.71e-11!155;UBERON:0001555!5.71e-11!155;UBERON:0007026!5.71e-11!155;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0000073!1.54e-10!94;UBERON:0001016!1.54e-10!94;UBERON:0003080!5.62e-10!42;UBERON:0004121!6.35e-10!169;UBERON:0003056!9.50e-10!61;UBERON:0001869!1.28e-09!32;UBERON:0001893!1.36e-09!34;UBERON:0002780!1.43e-09!41;UBERON:0001890!1.43e-09!41;UBERON:0006240!1.43e-09!41;UBERON:0002020!1.58e-09!34;UBERON:0003528!1.58e-09!34;UBERON:0000924!2.26e-09!173;UBERON:0006601!2.26e-09!173;UBERON:0004921!2.64e-09!129;UBERON:0004185!2.64e-09!129;UBERON:0000077!3.34e-09!130;UBERON:0002791!5.08e-09!33;UBERON:0000063!1.34e-08!97;UBERON:0001048!1.52e-08!168;UBERON:0005177!1.81e-08!107;UBERON:0000065!3.23e-08!53;UBERON:0001004!6.81e-08!72;UBERON:0001950!1.01e-07!20;UBERON:0000956!1.03e-07!25;UBERON:0000203!1.03e-07!25;UBERON:0008947!1.63e-07!38;UBERON:0003258!1.63e-07!38;UBERON:0002619!2.35e-07!22;UBERON:0001041!5.17e-07!98;UBERON:0002100!7.00e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.43e-13;20!UBERON:0002619;8.23e-13;22!UBERON:0001869;1.01e-11;32!UBERON:0000956;9.58e-11;25!UBERON:0000203;9.58e-11;25!UBERON:0002791;1.05e-10;32!UBERON:0001893;1.48e-10;34!UBERON:0003528;2.02e-10;34!UBERON:0002020;2.02e-10;34!UBERON:0007023;2.32e-08;114!UBERON:0001737;4.59e-08;9!UBERON:0001557;4.59e-08;9!UBERON:0002780;4.72e-08;41!UBERON:0001890;4.72e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-31,114;UBERON:0001869,1.39e-13,32;UBERON:0001950,4.43e-13,20;UBERON:0002619,6.88e-13,22;UBERON:0001893,2.01e-12,34;UBERON:0003528,2.84e-12,34;UBERON:0002020,2.84e-12,34;UBERON:0002791,5.19e-12,32;UBERON:0002780,2.15e-11,41;UBERON:0001890,2.15e-11,41;UBERON:0003080,2.15e-11,41;UBERON:0006240,2.15e-11,41;UBERON:0000073,3.41e-11,53;UBERON:0002616,3.41e-11,53;UBERON:0000956,8.20e-11,25;UBERON:0000203,8.20e-11,25;UBERON:0011216,2.04e-10,223;UBERON:0001049,3.51e-10,56;UBERON:0005068,3.51e-10,56;UBERON:0006241,3.51e-10,56;UBERON:0007135,3.51e-10,56;UBERON:0003075,4.37e-10,82;UBERON:0007284,4.37e-10,82;UBERON:0000955,3.18e-09,68;UBERON:0006238,3.18e-09,68;UBERON:0002346,3.57e-09,86;UBERON:0003056,1.88e-08,61;UBERON:0010314,2.03e-08,132;UBERON:0001737,3.96e-08,9;UBERON:0001017,7.65e-08,81;UBERON:0003103,6.20e-07,68;UBERON:0001016,7.97e-07,89;UBERON:0004111,8.78e-07,240 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0.491467873003018,0.697801167972428,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0.123121058076788,0.408001382488506,0,0.85870796139317,0.821246550437305,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,0.795285947051099,0,0.472674085820339,0.665188192387692,0.87834785693126,1.44076983047484,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0,0.446498641420399,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0.454072282934794,0,0,0,0.570471821544449,0.298897361103602,0.469737994575059,0.323745888736263,0.140450806702248,0.204154171254893,0.491337269247072,0.516628905878827,1.18800285728205,0,0,0,0.336672227908132,0.125118519871964,1.10825646193673,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.427114777637135,0.847727604638247,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0,0,0.365921118388786,0.530119073285941,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,2.01121560067735,1.51726221070292,0.964044119533928,1.65440959098591,2.17879444092406,2.37270619111097,1.21348177344148,2.35465758150415,1.53898862778556,0,0,0,0,0,0,0,0,0,1.20097467208968,0.768251997860379,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0.695582429850461,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,0,0.4400297149257,0,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0.468565659970853,0.601892199455438,0,0,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.802025881213139,0.0920809889358963,0.34444334449382,0.546273504020151,0.393373244878272,1.35359883872224,1.84836809050595,1.56869953835371,0,1.37217117560738,0,0,0.431831832204279,0,0,0,2.03901018436031,1.66215201785745,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0.650756789328606,1.23649213977267,0.915694648183434,1.32015199872941,0,0,3.21367859688319,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.356128142586949,0.495854746082934,0.576570202095319,0.765676274967505,0.910420027699949,0,0.31481234683064,0.6970372701606,0,1.06461206063404,0,0,0.572499546967965,0.372158369359667,0.949138274156178,0,0.255897791311334,0.42793898803392,0.636406495851874,0,0.359744915166629,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.818999468447914,0,1.13008116620243,0,0,2.19225442626881,0,0.655894752046633,0.608731130888112,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0.670302275535787,0,0.564862804660675,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0.485442086998054,0,3.97790605528978,2.62618933211459,0,1.84296421259539,2.98244294329889,1.40669416410513,1.55832187032068,0,0,0.996239941255349,0.828851746593443,0.755798243562828,1.63629892003448,0,3.42143546427988,0.718946809178615,1.61119057208048,0,2.36744173528641,0,0,0.969332746095218,2.31920245404628,1.99613798001194,0.260427761085233,1.04951999995435,1.44999915086959,1.137934482855,0.762760950878299,0.945550727071745,1.37897349296586,0,0.868124974666461,0,1.08536794762867,0,4.09143261745531,1.18219047581419,3.07139556015562,0,0,1.07730361905316,0.227884111694002,0,0.538545866458633,1.08647371922008,0.31900115973192,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,1.26598838716816,1.30586246527318,0.141353071433941,0.865554558968364,1.99052386215701,2.12298154808014,1.22206028986725,0,0,0,0.471807930864739,4.01288823649394,0.234264445725339,0,1.56531695145672,0,0.789168805698781,0,2.44858209304392,0.442306057399416,0.751617097072463,1.7626992537532,1.32930774541437,0.330991955875499,1.88359751044335,0,1.70765727617876,0,0.347119476670262,0,0.609414446062818,1.57254001417827,0,2.22539561964896,2.33885814675794,2.13500188338344,4.84945082442097,0,2.03382666702479,0.548167698587004,0.19871461170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| |||
|short_description=p2@PRKAA2 | |||
}} |
Revision as of 18:41, 10 January 2014
Short description: | p2@PRKAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKAA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_NM_006252, uc001cyk.3_5end |
EntrezGene: | PRKAA2 |
HGNC: | 9377 |
UniProt: | P54646 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-31 | 114 |
cerebral hemisphere | 1.39e-13 | 32 |
neocortex | 4.43e-13 | 20 |
regional part of cerebral cortex | 6.88e-13 | 22 |
telencephalon | 2.01e-12 | 34 |
brain grey matter | 2.84e-12 | 34 |
gray matter | 2.84e-12 | 34 |
regional part of telencephalon | 5.19e-12 | 32 |
regional part of forebrain | 2.15e-11 | 41 |
forebrain | 2.15e-11 | 41 |
anterior neural tube | 2.15e-11 | 41 |
future forebrain | 2.15e-11 | 41 |
regional part of nervous system | 3.41e-11 | 53 |
regional part of brain | 3.41e-11 | 53 |
cerebral cortex | 8.20e-11 | 25 |
pallium | 8.20e-11 | 25 |
organ system subdivision | 2.04e-10 | 223 |
neural tube | 3.51e-10 | 56 |
neural rod | 3.51e-10 | 56 |
future spinal cord | 3.51e-10 | 56 |
neural keel | 3.51e-10 | 56 |
neural plate | 4.37e-10 | 82 |
presumptive neural plate | 4.37e-10 | 82 |
brain | 3.18e-09 | 68 |
future brain | 3.18e-09 | 68 |
neurectoderm | 3.57e-09 | 86 |
pre-chordal neural plate | 1.88e-08 | 61 |
structure with developmental contribution from neural crest | 2.03e-08 | 132 |
larynx | 3.96e-08 | 9 |
central nervous system | 7.65e-08 | 81 |
compound organ | 6.20e-07 | 68 |
nervous system | 7.97e-07 | 89 |
anatomical conduit | 8.78e-07 | 240 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.27e-08 | 106 |