FFCP PHASE1:Hg19::chr11:111808119..111808141,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23695 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000528399_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_12_at_DIXDC1_5end | |||
|id=chr11:111808119..111808141,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;8.21e-09;3!CL:0000222;4.97e-07;1!CL:0002581;4.97e-07;1!CL:0002591;4.97e-07;1!CL:0002616;4.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.09e-09,3;CL:0002616,3.40e-07,1;CL:0002581,4.31e-07,1;CL:0000047,4.37e-07,8;CL:0002591,7.29e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.93e-19;3!UBERON:0004874;4.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.60e-16!90;UBERON:0003075!4.88e-15!86;UBERON:0007284!4.88e-15!86;UBERON:0005743!1.60e-13!86;UBERON:0000073!2.75e-13!94;UBERON:0001016!2.75e-13!94;UBERON:0001017!2.34e-12!82;UBERON:0003056!4.41e-11!61;UBERON:0002616!4.47e-11!59;UBERON:0001049!6.40e-11!57;UBERON:0005068!6.40e-11!57;UBERON:0006241!6.40e-11!57;UBERON:0007135!6.40e-11!57;UBERON:0000955!8.09e-11!69;UBERON:0006238!8.09e-11!69;UBERON:0001869!7.02e-10!32;UBERON:0001893!1.09e-09!34;UBERON:0007023!2.13e-09!115;UBERON:0000153!2.18e-09!129;UBERON:0007811!2.18e-09!129;UBERON:0000033!3.35e-09!123;UBERON:0002791!4.27e-09!33;UBERON:0002780!5.23e-09!41;UBERON:0001890!5.23e-09!41;UBERON:0006240!5.23e-09!41;UBERON:0002020!8.27e-09!34;UBERON:0003528!8.27e-09!34;UBERON:0000924!8.64e-09!173;UBERON:0006601!8.64e-09!173;UBERON:0003080!1.36e-08!42;UBERON:0000956!1.91e-08!25;UBERON:0000203!1.91e-08!25;UBERON:0004121!4.13e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.14e-12;2!UBERON:0002037;1.30e-09;6!UBERON:0000956;1.93e-07;25!UBERON:0000203;1.93e-07;25!UBERON:0000989;4.97e-07;1!UBERON:0002135;4.97e-07;1!UBERON:0008811;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.28e-12,2;UBERON:0001016,4.53e-11,89;UBERON:0002037,1.25e-09,6;UBERON:0006215,1.25e-09,6;UBERON:0001017,3.22e-09,81;UBERON:0003075,4.35e-09,82;UBERON:0007284,4.35e-09,82;UBERON:0002346,1.49e-08,86;UBERON:0004121,6.15e-08,171;UBERON:0000924,6.15e-08,171;UBERON:0006601,6.15e-08,171;UBERON:0000956,2.17e-07,25;UBERON:0000203,2.17e-07,25;UBERON:0000073,3.11e-07,53;UBERON:0002616,3.11e-07,53;UBERON:0000989,4.06e-07,1;UBERON:0008811,4.06e-07,1;UBERON:0006258,4.06e-07,1;UBERON:0005876,4.06e-07,1;UBERON:0004874,4.06e-07,1;UBERON:0002135,7.73e-07,1;UBERON:0001049,8.90e-07,56;UBERON:0005068,8.90e-07,56;UBERON:0006241,8.90e-07,56;UBERON:0007135,8.90e-07,56 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,1.74467704820074,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,1.43117993565528,0.958120975510189,2.38531015230125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,1.5905718941022,4.86634870302636,1.03988298880475,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0.775250277507987,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,1.89853131913626,1.09921046358244,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0,0,0.576175924479999,0.234321431833797,0,0,0,0.23486899728753,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0.558350568994769,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0.710019185033229,0.201504196455281,0.508681776931463,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.61642896765115,0.895304816199478,0,0,0,0,1.77866236955724,0,0,1.84267891867784,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.976135183992909,0,0.27470839445503,0.41254749960294,0,0,0,0.193341436584244,0,0,0.275673144969061,0.322260734604821,0,0,0.178064071293475,0,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0.16480387422676,0.211125408127993,0.996239941255349,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0.120596438625408,10.6807215421958,7.96170671504817,1.47773809476774,0.438770794307945,0.10893846351899,0,0.307801034015188,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0.296521128680622,1.35920332841153,1.14864144456001,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,0,1.53036380815245,0.63186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.164230914106418,0.290967049465258,0.0882561266915003,0.451961481561065,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0,0.399358000997982,0,0,0.604651252380536,0,0,0.709048640765013,0.576911008668165,0.539228350833479,0,0,0,0.681017030557878,0.482259445395058,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0,2.15292973888239,0,0,0.387848869084652,0,0,0,0,0,0,0,0.197611631897944,0,0,3.80812462358632,1.0027595760908,0.612691153526923,0.327872630709804,0.314108192500469,0,0.122026264901963,0.250381861413,0.573409195690071,0.998361463831671,0.248385611765534,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0.378806010550178,0.754703705257725,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0.318593534327405,0.899606224327209,0.155262956876259,0,0,0.521745061811734,0,0,0,1.27294061441792,0.322231671127465,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0.622077260032973,1.40683808434017,1.94084660514027,0,0.764467467344097,0.33946505990805,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.449604575675217,0,0.478901577171454,0,1.76450187355203,0.484100767249525,0,0,0,0,0,0,0.762764190934334,0,0.596748666348824,0.075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| |||
|short_description=p12@DIXDC1 | |||
}} |
Revision as of 10:19, 11 January 2014
Short description: | p12@DIXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DIXDC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -2bp_to_ENST00000528399_5end |
EntrezGene: | DIXDC1 |
HGNC: | 23695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.09e-09 | 3 |
perirenal adipocyte cell | 3.40e-07 | 1 |
perirenal preadipocyte | 4.31e-07 | 1 |
neuronal stem cell | 4.37e-07 | 8 |
smooth muscle cell of the pulmonary artery | 7.29e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.28e-12 | 2 |
nervous system | 4.53e-11 | 89 |
cerebellum | 1.25e-09 | 6 |
rhombic lip | 1.25e-09 | 6 |
central nervous system | 3.22e-09 | 81 |
neural plate | 4.35e-09 | 82 |
presumptive neural plate | 4.35e-09 | 82 |
neurectoderm | 1.49e-08 | 86 |
ectoderm-derived structure | 6.15e-08 | 171 |
ectoderm | 6.15e-08 | 171 |
presumptive ectoderm | 6.15e-08 | 171 |
cerebral cortex | 2.17e-07 | 25 |
pallium | 2.17e-07 | 25 |
regional part of nervous system | 3.11e-07 | 53 |
regional part of brain | 3.11e-07 | 53 |
penis | 4.06e-07 | 1 |
intromittent organ | 4.06e-07 | 1 |
lateral plate mesenchyme | 4.06e-07 | 1 |
undifferentiated genital tubercle | 4.06e-07 | 1 |
somatopleure | 4.06e-07 | 1 |
mitral valve | 7.73e-07 | 1 |
neural tube | 8.90e-07 | 56 |
neural rod | 8.90e-07 | 56 |
future spinal cord | 8.90e-07 | 56 |
neural keel | 8.90e-07 | 56 |